Sequence details NCBI ID: XM_004853780.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101718930

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AMPD1 ENSCPOG00000002591 (Guinea pig)

Gene Details

adenosine monophosphate deaminase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002357, Guinea pig)

Protein Percentage 95.98%
CDS Percentage 93.89%
Ka/Ks Ratio 0.10003 (Ka = 0.0208, Ks = 0.2084)

AMPD1 ENSG00000116748 (Human)

Gene Details

adenosine monophosphate deaminase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000430075, Human)

Protein Percentage 91.54%
CDS Percentage 90.47%
Ka/Ks Ratio 0.15522 (Ka = 0.0456, Ks = 0.294)

Ampd1 ENSMUSG00000070385 (Mouse)

Gene Details

adenosine monophosphate deaminase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088217, Mouse)

Protein Percentage 91.54%
CDS Percentage 88.1%
Ka/Ks Ratio 0.08345 (Ka = 0.0411, Ks = 0.4923)

Ampd1 ENSRNOG00000018656 (Rat)

Gene Details

adenosine monophosphate deaminase 1 (Ampd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025248, Rat)

Protein Percentage 92.1%
CDS Percentage 87.55%
Ka/Ks Ratio 0.07121 (Ka = 0.039, Ks = 0.5483)

Genome Location

Sequence Coding sequence

Length: 2343 bp    Location: 10348763..10320853   Strand: -
Raw sequence   
>XM_004853780.1
ATGAGTGTCAGGATAGTTTATAATGTTGCTCAGCCATCCCACAGTCTGNTTTCTCTTCCTACCTGCTGTACTAGCCTAGAATCAAGGATCCCAGCCACAATGCCTCTGTTCAAACTTCCAGCAGAAGAAAAACAAGTTGATGATGCAATGCGCAGCTTTGCTAAAAGAGTGTTTGCCTCTGAAGTCAAAGATGAGGGAGGCCGTCATGAAATTTCCCCCTTTGATGTGGATGAGATCTGTCCAATTTCTTTTCACGAGATGCAAGCACATATATTCCAGAAGGAAATTCTCTCCATTTCCACCGACGGCCAGAGAAAAAGGCGTTTCCAAGGACGGAAGACTGTGAATCTGTCAATTCCACTGAGTGAAACGTCTTCCACCAAACTGTCCCATATTGATGAATGCATTTCTTCGTCTCCAACCTACGAGACCGTGCCTGATTTTCAGAGAGTGCAGATCACTGGTGACTATGCCTCTGGGGTAACAGTTGAAGATTTTGAAGTGGTTTGTACAGGTCTGTATCGGGCATTATGTATCCGGGAAAAATACATGCAGAAGTCATTTCAGAGGTTCCCTAAAACCCCCTCCAAGTACTTGCGGAACATTGATGGCCAAGCATGGGTAGCAAATGAGAACTTCTATCCAGTCTTTACCCCTCCTCCGAAGAAGGGAGAAGACCCTTTCAGAGCAGATAACCTTCCTGAAAACCTGGGCTATCACCTCCAGATGAAGGACGGCGTAGTTCACATCTATCCTAATGAAGCAGCTGCCAGCAAAGATGAGCCCAAGGCATATCCTTACCCAAATCTGGACGCCTTCTTAGATGATATGAATTTTTTGCTTGCTCTAATTGCCCAAGGACCTGTAAAGACCTACACTCACCGGCGCCTGAAGTTCCTCTCCTCCAAGTTTCAGGTCCATGAGATGCTCAACGAGATGGATGAGCTAAAGGAGCTGAAGAACAACCCCCACCGAGATTTTTATAACTGCAGAAAGGTGGACACCCATATCCACGCAGCTGCTTGCATGAACCAGAAACATCTGCTGCGCTTTATTAAGAAATCATACTACATTGATGCTGACAGAGTGGTCTATAGCACCAAAGAGAAGAATCTGACCTTAAAGGAGCTTTTTGATAAATTGAAAATGCACCCATATGACCTGACTGTTGACTCTCTGGATGTGCATGCTGGACGCCAGACATTCCAGCGTTTCGATAAATTCAATGACAAATACAATCCTGTGGGAGCGAGCGAGCTACGGGACCTCTACCTGAAGACGGACAATTACATTAATGGAGAATATTTTGCCACTATAATCAAGGAGGTAGGAGCAGACCTGGTGGATGCCAAGTACCAGCACGCAGAGCCCCGCCTGTCCATCTACGGTCGCAGTCCTGATGAGTGGAGCAAACTGGCCTCCTGGTTTGTCCACAACCGCATCTACTGCCCCAACCTGACGTGGATGATCCAGGTCCCGAGGATCTATGATGTGTTTCGATCCAAGAACTTCCTTCCACACTTTGGAAAAATGCTGGAGAATATTTTCATGCCAGTGTTTGAGGCCACCATCAACCCCCAGGCTCATCCAGAACTCAGTATCTTCCTCAAGCATATCACTGGCTTTGACAGCGTGGATGATGAGTCCAAACACAGCGGTCACATGTTTTCCTCCAAGAGTCCCACGCCCCAGGAGTGGACAGTGGAAAACAATCCATCTTATACTTACTATGCCTACTACATGTACGCAAACATCATGGTGCTCAACTGCCTGAGGAAGGAACGAGGCATGAATACATTTCTGTTCCGACCTCACTGTGGGGAAGCTGGAGCTCTCACCCACCTCATGATAGCATTCATGATAGCAGATAATATCTCTCATGGCCTGAATTTGAAAAAGAGTCCTGTGTTACAGTACTTGTATTTCTTAGCCCAGATTCCCATCGCCATGTCACCATTGAGTAACAACAGCCTATTTCTCGAGTATGCAAAAAATCCATTTTTAGATTTCCTCCAGAAAGGCCTAATGGTCTCACTGTCAACCGATGACCCCATGCAGTTCCACTTCACCAAGGAGCCCCTGATGGAAGAGTATGCCATTGCTGCGCAAGTCTTCAAGCTGAGCACCTGCGACATGTGTGAAGTGGCGAGGAACAGCGTCTTACAGTGTGGGATTGCTCATGAGGAGAAAGCAAAGTTTCTGGGTAAGAATTATCTTGAGGAAGGCCCTACTGGAAATGATATCCAGAAGACCAATGTAGCCCAAATCCGCATGGCCTATCGTTATGAAACCTGGTGTTATGAACTCAATTTAATTGCTGAGGGTCTTAAATCAACAGAATAA

Related Sequences

XP_004853837.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: AMP deaminase 1 [Heterocephalus glaber]

Length: 780 aa      View alignments
>XP_004853837.1
MSVRIVYNVAQPSHSLXSLPTCCTSLESRIPATMPLFKLPAEEKQVDDAMRSFAKRVFASEVKDEGGRHEISPFDVDEICPISFHEMQAHIFQKEILSISTDGQRKRRFQGRKTVNLSIPLSETSSTKLSHIDECISSSPTYETVPDFQRVQITGDYASGVTVEDFEVVCTGLYRALCIREKYMQKSFQRFPKTPSKYLRNIDGQAWVANENFYPVFTPPPKKGEDPFRADNLPENLGYHLQMKDGVVHIYPNEAAASKDEPKAYPYPNLDAFLDDMNFLLALIAQGPVKTYTHRRLKFLSSKFQVHEMLNEMDELKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYYIDADRVVYSTKEKNLTLKELFDKLKMHPYDLTVDSLDVHAGRQTFQRFDKFNDKYNPVGASELRDLYLKTDNYINGEYFATIIKEVGADLVDAKYQHAEPRLSIYGRSPDEWSKLASWFVHNRIYCPNLTWMIQVPRIYDVFRSKNFLPHFGKMLENIFMPVFEATINPQAHPELSIFLKHITGFDSVDDESKHSGHMFSSKSPTPQEWTVENNPSYTYYAYYMYANIMVLNCLRKERGMNTFLFRPHCGEAGALTHLMIAFMIADNISHGLNLKKSPVLQYLYFLAQIPIAMSPLSNNSLFLEYAKNPFLDFLQKGLMVSLSTDDPMQFHFTKEPLMEEYAIAAQVFKLSTCDMCEVARNSVLQCGIAHEEKAKFLGKNYLEEGPTGNDIQKTNVAQIRMAYRYETWCYELNLIAEGLKSTE