Sequence details NCBI ID: XM_004853771.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ap4b1
Gene Name adaptor-related protein complex 4, beta 1 subunit, transcript variant X2
Entrez Gene ID 101714886

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AP4B1 ENSCPOG00000001286 (Guinea pig)

Gene Details

adaptor-related protein complex 4, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001165, Guinea pig)

Protein Percentage 92.82%
CDS Percentage 92.05%
Ka/Ks Ratio 0.20024 (Ka = 0.0415, Ks = 0.2071)

AP4B1 ENSG00000134262 (Human)

Gene Details

adaptor-related protein complex 4, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000358582, Human)

Protein Percentage 93.5%
CDS Percentage 90.39%
Ka/Ks Ratio 0.11414 (Ka = 0.0355, Ks = 0.3114)

Ap4b1 ENSMUSG00000032952 (Mouse)

Gene Details

adaptor-related protein complex AP-4, beta 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044262, Mouse)

Protein Percentage 90.51%
CDS Percentage 87.13%
Ka/Ks Ratio 0.12459 (Ka = 0.0551, Ks = 0.442)

Ap4b1 ENSRNOG00000019455 (Rat)

Gene Details

adaptor-related protein complex 4, beta 1 subunit (Ap4b1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026382, Rat)

Protein Percentage 90.53%
CDS Percentage 87.6%
Ka/Ks Ratio 0.14166 (Ka = 0.0562, Ks = 0.3968)

Genome Location

Sequence Coding sequence

Length: 2220 bp    Location: 9579170..9569651   Strand: -
Raw sequence   
>XM_004853771.1
ATGCCGTACCTTGGCTCAGAGGACGTGGTGAAGGAACTGAAGAAGGCTCTGTGTAACCCTCACATTCAGGCTGATAGGCTGCGCTACCGGAATGTCATCCAGCGAGTGATTAGGCACATGACTCAGGGCTTGGACATGTCTTGTGTTTTCATGGAAATGGTGAAGGCCAGTGCCACTGTAGATATTGTTCAGAAGAAGCTGGTTTACCTGTACATGTGCACGTATGCACCCCTGAAACCAGACCTAGCTCTCCTGGCCATCAATACCCTGTGCAAAGACTGCTCGGACCCCAACCCAATGGTGCGAGGGCTGGCACTGCGGAGCATGTGTAGCCTCAGGATGCCTGGTGTGCAGGAGTATATCCAACAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTTAGGAGGGTGGCAGTTCTTGGATGTGCCAAAATGCATAACCTTCACGGAGACTCTGAAGTGGACGGTGCCCTGGTAAATGAGTTATACAGTTTACTGCGGGACCAAGATCCAATTGTGGTTGTGAACTGCTTAAGGTCTCTAGAGGAAATTCTGAAATATGAAGGAGGTGTTGTCATCAATAAGCCCATCGCTCACCATCTCTTAAATCGGATGTCGAAACTGGACCAATGGGGCCAGGCTGAAGTGTTGAACTATCTGCTCCGCTACCAACCCCACAGTGAGGAGGAACTGTTTGACATTCTCAACCTGTTGGATAGCTTTCTCAAGAGTAGCAGCCCCGGTGTAGTAACAGGAGCCACCAAACTCTTTCTGATTTTGGCAAAGAAGTTCCCCCATGTGCAAACTGATGTGCTTGTGAGAGTCAAGGGACCTTTGCTTGCTGCTTGTTCTTCTGAGAGCAGGGAGCTCTGTTTTGTCGCCCTCTGTCATGTGCGCCAGATCTTGCATAGTTTGCCAGGTCACTTTAGCAGCCACTACAAAAAGTTTTTTTGCTCCTACTGGGAGCCCCACTATATCAAGCTACAGAAGGTGGAGGTACTGTGTGAGCTGGTGAACGATGAGAACGTCCAGCAGGTGCTTGAGGAGCTTCAAGGATACTGCACTGATGTGTCTATTGACTTTGCACAGGCTGCCATCTTTGCCATTGGTGGCATTGCCAGGACTTACACAGATCAGTGTGTGCAGATTCTCACAGAGTTGCTGGGGCTCCGACAAGAGCACATTACTACAGTGGTGCTACAGACTTTCCGAGACCTTGTTTGGTTGTGTCCTCAGTGTACTGAAGCTGTGTGTCAGGCCCTGCTCAGCTGTGAGGAGAACATTCAAGACAGTGAGGGGAAACAGGCACTTATTTGGCTACTTGGGGTCCATGGAGAAAGAATTCCCAATGCTCCTTATGTTTTAGAGGACTTTGTAGAAAGTGTGAAGTCAGAGACATTTCCTGCTGTTAAGATGGAGCTCCTCACTGCACTGCTGCGCCTGTTTCTCTCACGCCCTGCTGAGTGCCAAGACATGCTGGGACGCCTGTTATATTACTGCATAGAGGAAGAAAAGGATATGGCTGTACGGGACCGAGGCCTCTTCTATTACCGCCTCCTTTTACTTGGCATTGATGAAGTTAAGCAGATCCTGTGTAGTCCTAAATCGGACCCTTCTCTCGGACTTTTGGAGGATCAACCAGAAAGACCTGTGAATAGCTGGGCTTCAGACTTTAATACCCTGGTGCCAGTGTATGGCAAAGCCCATTGGGCAACTATATTTAAACGCCAAGGGACAGAGCAGTGTGGCCCAGAGCTTCCTCGTACTGCATCCTTTGCTCCATCAGGACACCTGATTTCTGAAGAGAACAAGGAGAGAGTACAAGAACTCCCTGATACTGAAGCTCTCATGCTAATCCCCAATTGCCAGCTTACTGCTGAATATTTTGAGAAAACTTGGCTTAGCCTCAAAGTTGCTCATCAGCAGGTGTTGCCTTGGCAGGGAGAAGTTCATCCTGACACCCTCCAGATGGCTCTGCAGGTAGTGAACATTCAGACCATTGCAATGAGCAGGGTTGGGGCTCGGCCATGGAAAGCCTACCTCAGTGCTCAGGATGCTACTGGTTGTCTGTTCTTAACAGAACTGCTGTTGGAGCCCAAGAACTCAGAAATGCAGATCTCTGTGAAACAAAGTGAGACAAGGACTGAGATACTGAGCAGTTTTGTTTCGGTATTAGAAACTGTGATTGGAACAATTGGAAACATGAAATCATAA

Related Sequences

XP_004853828.1 Protein

Ap4b1 PREDICTED: AP-4 complex subunit beta-1 isoform X2 [Heterocephalus glaber]

Length: 739 aa      View alignments
>XP_004853828.1
MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGLDMSCVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKYEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNYLLRYQPHSEEELFDILNLLDSFLKSSSPGVVTGATKLFLILAKKFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYWEPHYIKLQKVEVLCELVNDENVQQVLEELQGYCTDVSIDFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVLQTFRDLVWLCPQCTEAVCQALLSCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVESVKSETFPAVKMELLTALLRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLLGIDEVKQILCSPKSDPSLGLLEDQPERPVNSWASDFNTLVPVYGKAHWATIFKRQGTEQCGPELPRTASFAPSGHLISEENKERVQELPDTEALMLIPNCQLTAEYFEKTWLSLKVAHQQVLPWQGEVHPDTLQMALQVVNIQTIAMSRVGARPWKAYLSAQDATGCLFLTELLLEPKNSEMQISVKQSETRTEILSSFVSVLETVIGTIGNMKS