Sequence details NCBI ID: XM_004853727.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ddx20
Gene Name DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
Entrez Gene ID 101699950

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DDX20 ENSCPOG00000001817 (Guinea pig)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001645, Guinea pig)

Protein Percentage 90.6%
CDS Percentage 92.76%
Ka/Ks Ratio 0.28723 (Ka = 0.0489, Ks = 0.1703)

DDX20 ENSG00000064703 (Human)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

External Links

Gene Match (Ensembl Protein ID: ENSP00000358716, Human)

Protein Percentage 85.4%
CDS Percentage 88.24%
Ka/Ks Ratio 0.26454 (Ka = 0.0806, Ks = 0.3045)

Ddx20 ENSMUSG00000027905 (Mouse)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088176, Mouse)

Protein Percentage 80.51%
CDS Percentage 83.96%
Ka/Ks Ratio 0.24896 (Ka = 0.112, Ks = 0.4498)

Ddx20 ENSRNOG00000015274 (Rat)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 (Ddx20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062813, Rat)

Protein Percentage 81.49%
CDS Percentage 83.96%
Ka/Ks Ratio 0.22747 (Ka = 0.1077, Ks = 0.4736)

Genome Location

Sequence Coding sequence

Length: 2469 bp    Location: 7450614..7475673   Strand: +
Raw sequence   
>XM_004853727.1
ATGGCGGCGATGTTTGAAGCCCCGGCGGCCTCAGCGGCCGCGGAAACCGATATGCCCACGGAGCGTGTAGCCGCGCAGGCCTCTGAGCTGGAGCCACGCACAGAGCCAGTGTGGAGGATGCGGACGGCTCACGACATCGGCAGCCCCCGGACCCGCACAGGAGATGTGCTGCTGCCCGAGCCGGCGGACTTCGAGTCGCTGCTGCTGTCTCGGCCGGTGCTCGAGGGCCTGCGGGCGGCCGGTTTCCAGAGGCCTTCGCCAGTGCAGCTCAAGGCCATCCCGCTGGGGCGTTGCGGTTTCGATTTAATTGTTCAAGCTAAATCAGGCACTGGGAAAACCTGTGTATTCTCCACCATTGCTTTGGACTCTCTTGTTCTTGAAAACTGTAGTACTCAGATTTTGATCTTGGCTCCTACAAGAGAAATTGCTGTACAGATACATTCTGTTATTACAGCCATTGGAATAAAAATGGAAGGCTTAGAGTGTCATGTCTTTATTGGAGGAACTCCATTATCACAAGACAAAGCCAGACTTAAAAAGTGTCATATTGCTGTTGGATCTCCTGGAAGAATTAAACAACTCATAGAACTTGACTACTTGAATCCAGGCAGTATACGTCTCTTTATTCTTGATGAAGCAGACAAGCTTTTAGAAGAAGGCAGTTTTCAGGAGCAAATAAATTGGATTTATTCTTCCTTGCCTGCCAGTAAACAGATGTTGGCAGTATCAGCTACTTACCCAGAATTTTTGGCTAATGCTTTGACAAGGTATATGAGAGAACCCACTTTCGTAAGATTGAATTCCAGTGATCCAAGTCTCATAGGTTTGAAGCAGTATTACAAAGTTGTCAATTCTTACCCTTTGGCCTATAAGATTTTTGAGGAAAAGGCTCAGCATTTACAGGATCTTTTCAGCAGAATTCTGTTTAATCAAGCCTTGGTCTTTTCTAATTTGCACAGCAGAGCACAACATTTGGCTGATATTCTTTCTTCTAAAGGCTTTCCTGCCGAATGCATTTCAGGCAACATGAATCAGAATCAGCGCCTAGATGTTATGGCTAAACTAAAACAGTTTCATTGCAGAGTTCTCATTTCTACAGATTTGACTTCCCGTGGGATTGATGCTGAGAAGGTGAATCTGGTTGTAAATCTGGATGTACCATTGGACTGGGAGACATACATGCATCGGATTGGCAGAGCTGGGCGTTTTGGTACATTGGGACTGACAGTGACCTACTGTTGCCGGGGAGAAGAAGAAAATATGATGATGCAAATTGCCCAGAAATGTAACATCAACCTTCTCCCCTTACCAGATCCCATTCCTCTTGGTCTGATGGAAGAGTGTTTGGATGGGGATGTGGAGGTTAAAACTGCTGTAGATGCAAATGGCCTAGCAAGTGTACCTGCCCAACCCTCGAAAAAACAAATTCAAAAAATTGAGAAAACCTTTCAAACTCAGAAAACAAATGGTAACCACATGGCTTCTTCTAGAAATACTTCTGTTTCTCTATTATCAGTCAAATCAAAACATAATACCAAACAAAAGCTTCCTGTGAAAAGCCACTCAGAGTGTGGAATCATAGAAAAAGCATTGTCACCAAAAGAACTGGGGTGTGCCATAAAACTGAAAGAACAGACGAATTCTATTCAGGCCTCTGTTCAGAACTCTACCAACAGTCAGCAGCAGGTCAAAGAAACTTCACATGTGTCACTCCCTAAAATTCCTTGTCTGTCTTCCTTTAAAATCCATCAGCCATGCACTTTGAGTTTTGTAGAGCTGGTGGAGGATTATGAACACTATATCAAAGAAGGGTTAGAGAAACCTGTGGAAATTATCAGGCACTACACAGACCCTGGGGATCAGACTGTCAACTCTCAGAATGGTTTTGTAAGAAATAGAGTTACTGAAGAGAGAGTACAGATACTTGCAAGTAGTAGCCAATCTGGAGACTCGGAAAGTGACAGTGATTCTTATAGCTCAGGGACTTCCTCCCAGAGCAAAGGAAATAAGTTGTACGTGGAAGGCTCTTCTGATTCTCAACTGAAAGACTCTGAATCTACTCCTGTGCCTGGCTATATCTCTTTGGAACAACCTCTGAATGGAAGTGACACCACCAATCCAGAGGAATATCAAGAATCTCCTGAAATCCAGATAAAGACAAGGCATAAAGAGGGATCTAACCGGAGAGTGAAGCAGAGCCGGAGAAACCTACCTGAGCATTCTTCTTATCGATCGCAACCAGAACTTTGGGAAGATGGTTGGTATCAGTGTCATAGGGAAACACATCCTAGTTTTTCTGATGCCTACCAGGATTATGAATACTGGAGTGCTTACTACAGGGCATGGCAAGAATACTATGCTGCTGCTTCTCAGTCATATTATTGGAATGCTCAGAGAAATCCAAATTGGATGGCAGCTTATCATATGAATACAGTTTATCTACAGGAAATGATGCATGGTAACCAGTGA

Related Sequences

XP_004853784.1 Protein

Ddx20 PREDICTED: probable ATP-dependent RNA helicase DDX20 [Heterocephalus glaber]

Length: 822 aa      View alignments
>XP_004853784.1
MAAMFEAPAASAAAETDMPTERVAAQASELEPRTEPVWRMRTAHDIGSPRTRTGDVLLPEPADFESLLLSRPVLEGLRAAGFQRPSPVQLKAIPLGRCGFDLIVQAKSGTGKTCVFSTIALDSLVLENCSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKARLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTRYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAYKIFEEKAQHLQDLFSRILFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDVMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMQIAQKCNINLLPLPDPIPLGLMEECLDGDVEVKTAVDANGLASVPAQPSKKQIQKIEKTFQTQKTNGNHMASSRNTSVSLLSVKSKHNTKQKLPVKSHSECGIIEKALSPKELGCAIKLKEQTNSIQASVQNSTNSQQQVKETSHVSLPKIPCLSSFKIHQPCTLSFVELVEDYEHYIKEGLEKPVEIIRHYTDPGDQTVNSQNGFVRNRVTEERVQILASSSQSGDSESDSDSYSSGTSSQSKGNKLYVEGSSDSQLKDSESTPVPGYISLEQPLNGSDTTNPEEYQESPEIQIKTRHKEGSNRRVKQSRRNLPEHSSYRSQPELWEDGWYQCHRETHPSFSDAYQDYEYWSAYYRAWQEYYAAASQSYYWNAQRNPNWMAAYHMNTVYLQEMMHGNQ