Sequence details NCBI ID: XM_004853716.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atp5f1
Gene Name ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
Entrez Gene ID 101696522

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP5F1 ENSCPOG00000014070 (Guinea pig)

Gene Details

ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012673, Guinea pig)

Protein Percentage 89.84%
CDS Percentage 92.45%
Ka/Ks Ratio 0.34245 (Ka = 0.0539, Ks = 0.1575)

ATP5F1 ENSG00000116459 (Human)

Gene Details

ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1

External Links

Gene Match (Ensembl Protein ID: ENSP00000358737, Human)

Protein Percentage 84.38%
CDS Percentage 87.24%
Ka/Ks Ratio 0.28743 (Ka = 0.0887, Ks = 0.3085)

Atp5f1 ENSMUSG00000000563 (Mouse)

Gene Details

ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113022, Mouse)

Protein Percentage 87.89%
CDS Percentage 87.11%
Ka/Ks Ratio 0.18205 (Ka = 0.0702, Ks = 0.3856)

Genome Location

Sequence Coding sequence

Length: 771 bp    Location: 7167145..7178755   Strand: +
Raw sequence   
>XM_004853716.1
ATGCTGTCCCGGGTGGTATTTTCTGCTGCCGCTACAGCGGCCCCTTCTCTGAAGAACGTAGCCCTCCTAGGACCAGGGGTCTTGCAGGCAACAAGGATCTTTCACACAGGGCAGCCAAGACTTGCTCCTCTACCACCTCTTCCTGAATATGGCGGAAAAGTTCGCCTTGGGTTGATTCCTGAGGAATTCTTCCAGTTCCTTTATCCTAAAACTGGTGTAACAGGACCCTACATGCTTGGAACTGGGCTTATCTTATATTTTCTGTCCAAAGAAATTTATGTGATTACCCCAGAGACCATCTCTTCCATATCTGTAATAGGACTGATTGTCTATGCAATTAAAAAATATGGTGCCTCTTTTGCAGAATTTGTTGATAAACTCAATGAGGAAAAAATTGCCCAACTAGAAGAGTCAAAGCAAGCTTCCATTAAACAAATCCAGGATGCAATTGATTTGGAGAAATCACAGCAGACACTTGCTCAGAAGCGCCACTACCTTTTTGATGTCCAGAGGAATAATATTGCTATGGCCTTGGAGGTTACTTACCGGGAACGGCTACATAGAGTATACAAGGAGGTAAAGAATCGCCTGGACTATCATATCTCTGTGCAGAATGTGATGCATCGAAAGGAACAAGAGCACATGATAAACTGGGTGGAGAAGCAAGTGGTGCAGAGCATCTCTGCACAGCAGGAAAAGGAGACAATTGCCAAGTGCATTGCAGATCTAAAGCTGCTTGCAAAGAAGGCTCAAGCACAGCCCATTATGTAA

Related Sequences

XP_004853773.1 Protein

Atp5f1 PREDICTED: ATP synthase subunit b, mitochondrial [Heterocephalus glaber]

Length: 256 aa      
>XP_004853773.1
MLSRVVFSAAATAAPSLKNVALLGPGVLQATRIFHTGQPRLAPLPPLPEYGGKVRLGLIPEEFFQFLYPKTGVTGPYMLGTGLILYFLSKEIYVITPETISSISVIGLIVYAIKKYGASFAEFVDKLNEEKIAQLEESKQASIKQIQDAIDLEKSQQTLAQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKNRLDYHISVQNVMHRKEQEHMINWVEKQVVQSISAQQEKETIAKCIADLKLLAKKAQAQPIM