Details from NCBI annotation

Gene Symbol Pifo
Gene Name primary cilia formation, transcript variant X2
Entrez Gene ID 101725818

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PIFO ENSCPOG00000012325 (Guinea pig)

Gene Details

primary cilia formation

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011088, Guinea pig)

Protein Percentage 89.51%
CDS Percentage 91.77%
Ka/Ks Ratio 0.37025 (Ka = 0.0619, Ks = 0.1671)

PIFO ENSG00000173947 (Human)

Gene Details

primary cilia formation

External Links

Gene Match (Ensembl Protein ID: ENSP00000358753, Human)

Protein Percentage 71.68%
CDS Percentage 79.19%
Ka/Ks Ratio 0.46174 (Ka = 0.2003, Ks = 0.4338)

Pifo ENSMUSG00000010136 (Mouse)

Gene Details

primary cilia formation

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000010280, Mouse)

Protein Percentage 69.36%
CDS Percentage 75.92%
Ka/Ks Ratio 0.43846 (Ka = 0.2334, Ks = 0.5323)

Pifo ENSRNOG00000016842 (Rat)

Gene Details

Protein Pifo

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048012, Rat)

Protein Percentage 68.79%
CDS Percentage 74.76%
Ka/Ks Ratio 0.44415 (Ka = 0.2509, Ks = 0.5648)

Genome Location

Sequence Coding sequence

Length: 522 bp    Location: 7091037..7095995   Strand: +
>XM_004853714.1
ATGTGCCTCAGCAAAGCGGGGACTGTCAATGACTACTCCTTTGGAACACGTCAACAGAGGAAGCTCTTTCCTCTCTACCATCCTCCAAACCGATTGGGGAATTATTTTCCCCCTCTTAGAGGATCGCCTCACACAGGCCCTGGGCATTACATATCAGAAGACTATGGCCTGGCATACAAGCTGTCTAAGATTCCGACCAGTATAAAAGGATATGCAATTGGAGCCAGAACAGCTGTGAGGTTTAAGCCAGTCAATAAGGATGTGACACCTTGCCCAGGCAAGTACCAGAAGGCAAATACTTCAGAGGAAAAGCACAAACAAAATTTTGCTGCATTCAATGTCTTGATGCCTCGATCTGGACAATTTTCAAAGGACACTTCTTATCCTGGCCCTGGCACTTACAACCCAGAGAAGAAGCCTCCTCCAAAAGTTGCTTGGCCAATGAAATTTGGATCTCCAGACTGGGCTCAGGTTCCATGTCTGCAGAAAAGAACTCTAAAAGCTGAGAATCTCCAGGATTGA

Related Sequences

XP_004853771.1 Protein

Pifo PREDICTED: protein pitchfork isoform X2 [Heterocephalus glaber]

Length: 173 aa      View alignments
>XP_004853771.1
MCLSKAGTVNDYSFGTRQQRKLFPLYHPPNRLGNYFPPLRGSPHTGPGHYISEDYGLAYKLSKIPTSIKGYAIGARTAVRFKPVNKDVTPCPGKYQKANTSEEKHKQNFAAFNVLMPRSGQFSKDTSYPGPGTYNPEKKPPPKVAWPMKFGSPDWAQVPCLQKRTLKAENLQD