Details from NCBI annotation

Gene Symbol Amigo1
Gene Name adhesion molecule with Ig-like domain 1
Entrez Gene ID 101701990

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AMIGO1 ENSCPOG00000014097 (Guinea pig)

Gene Details

adhesion molecule with Ig-like domain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012699, Guinea pig)

Protein Percentage 94.72%
CDS Percentage 94.11%
Ka/Ks Ratio 0.15439 (Ka = 0.0263, Ks = 0.1705)

AMIGO1 ENSG00000181754 (Human)

Gene Details

adhesion molecule with Ig-like domain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000358880, Human)

Protein Percentage 91.48%
CDS Percentage 90.47%
Ka/Ks Ratio 0.1506 (Ka = 0.046, Ks = 0.3052)

Amigo1 ENSMUSG00000050947 (Mouse)

Gene Details

adhesion molecule with Ig like domain 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102267, Mouse)

Protein Percentage 89.23%
CDS Percentage 86.45%
Ka/Ks Ratio 0.1192 (Ka = 0.0631, Ks = 0.5293)

Amigo1 ENSRNOG00000045665 (Rat)

Gene Details

adhesion molecule with Ig like domain 1 (Amigo1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066608, Rat)

Protein Percentage 90.06%
CDS Percentage 86.95%
Ka/Ks Ratio 0.12008 (Ka = 0.0589, Ks = 0.4901)

Genome Location

Sequence Coding sequence

Length: 1485 bp    Location: 5236492..5231266   Strand: -
>XM_004853638.1
ATGCAACCCCAGTGTGACCTGCGAGGCCTCTGGCTCCTGCTGCTGTCCTTGTTCCTGATCCTCTTTGAGGTGGCCAGAGCTGGCCGACCAGTGGCTAGCTGTCCTGCTGCCTGCCTGTGTGCCAGCAACATCCTCAGCTGCTCCAAACAGCAACTGCCCAATGTGCCCCATTCCTTACCCAGCTACACAGCACTACTGGACCTCAGCCACAACAACCTGAGCCGCCTTCGAGCTGAGTGGACCCCTACACACCTGATCCACCTGCATTCCCTGCTGCTGAGCCACAATCACCTGAACTTCATCTCCTCTGAGGCCTTTTCCCCAGTACCCAACCTGCGCTACCTGGACCTCTCCTCCAACCAGCTGCGAACACTGGACGAGTTTCTGTTCACTGAACTGCAAGCACTGGAGGTTCTGCTGCTCTACAATAACCATATCATGGCGGTGGACCGCTGTGCCTTCGATGACATGGCCCAGCTCCAGAAACTCTACTTGAGCCAGAACCAGATCTCCCGTTTCCCTCTGGAACTGGTCAATGAAAGAGCCAAGCGACCCAAACTAACACTCTTGGATCTGTCCTCCAACAAGCTGAAGACCTTGCCACTGAGTGACCTGCAGAAACTGCCAGCATGGATCAAGAATGGACTTTACCTACATAACAACCCCCTGGAATGCACCTGCAAGCTTTACCAGCTCTTTTCACACTGGCAGTACCGGCAGCTGAGCTCTGTTATGGACTTTCAGGAGGATCTGTACTGTGTGCGCTCCAAGGAGCTACACAGTGTCTTCAACCTGAGTTTCCTCAACTGCAGCGAGTACAAGGAGAGTGCCTGGGAGGCTCACCTGGGTGACACCTTCACTATCAACTGTGACACCAAGCAGCAGGGCATGACTAAGGTGTGGGTAACACCGAGCAATGAACAAGTGCTAGATGAGGTGGCCAATGGCACAGTGAGAGTGAGAGTCAAGGATGGCAATCTTCAATTTGAAAAGGTGCAGGTTGAAGATGGGGGTGTGTATACCTGCCATGCTATGGGGGAAACATTCAATGAGACACTGTCTGTGGAGTTGAAAGTATACAACTTCACCTTGCATGGACACCATGACACCCTCAACACAGCTTATACCACCCTAGTGGGTTGTATCCTCAGTGTGGTTCTGGTCCTCATATACCTGTATCTCACCCCTTGCCGCTGCTGGTGCCGGGGTGTAGAGAAGCCTTCCAGCCATCAAGGTGACAGCCTCAGCTCTTCCATGCTTAGTACCACACCCAACCATGATCCTATGGCTGGTGGGGACAAAGATGATGGTTTTGACCGGCGGGTGGCCTTCCTGGAACCTGCTGGACCTGGACAAGGTCAGAACGGCAAGCTCAAGCCAGGTAACACCCTGCCAGTGCCCGAGGCAACAGGCAAGGGCCAACGAAGGATGTCAGATCCAGAATCTGTCAGCTCGGTCTTCTCTGATACACCCATTGTGGTGTGA

Related Sequences

XP_004853695.1 Protein

Amigo1 PREDICTED: amphoterin-induced protein 1 [Heterocephalus glaber]

Length: 494 aa      View alignments
>XP_004853695.1
MQPQCDLRGLWLLLLSLFLILFEVARAGRPVASCPAACLCASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRLRAEWTPTHLIHLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFTELQALEVLLLYNNHIMAVDRCAFDDMAQLQKLYLSQNQISRFPLELVNERAKRPKLTLLDLSSNKLKTLPLSDLQKLPAWIKNGLYLHNNPLECTCKLYQLFSHWQYRQLSSVMDFQEDLYCVRSKELHSVFNLSFLNCSEYKESAWEAHLGDTFTINCDTKQQGMTKVWVTPSNEQVLDEVANGTVRVRVKDGNLQFEKVQVEDGGVYTCHAMGETFNETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSVVLVLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEPAGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV