Sequence details NCBI ID: XM_004853629.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psma5
Gene Name proteasome (prosome, macropain) subunit, alpha type, 5
Entrez Gene ID 101699124

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMA5 ENSCPOG00000013670 (Guinea pig)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012309, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 96.4%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1372)

PSMA5 ENSG00000143106 (Human)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000271308, Human)

Protein Percentage 100.0%
CDS Percentage 94.74%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2211)

Psma5 ENSRNOG00000019868 (Rat)

Gene Details

proteasome (prosome, macropain) subunit, alpha type 5 (Psma5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026928, Rat)

Protein Percentage 100.0%
CDS Percentage 92.39%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3616)

Genome Location

Sequence Coding sequence

Length: 726 bp    Location: 5148911..5127271   Strand: -
Raw sequence   
>XM_004853629.1
ATGTTCCTCACGCGGTCGGAATACGACAGAGGCGTGAATACTTTTTCTCCTGAAGGAAGATTGTTTCAAGTGGAATATGCCATTGAGGCTATCAAGCTTGGTTCTACAGCCATTGGGATCCAGACATCGGAAGGTGTATGCCTAGCTGTGGAGAAAAGAATTACTTCCCCACTCATGGAGCCTAGCAGCATTGAGAAAATAGTAGAGATTGATGCTCATATAGGTTGTGCCATGAGTGGGCTAATTGCTGATGCTAAGACTTTAATTGATAAGGCCAGAGTGGAGACACAGAACCACTGGTTTACCTATAATGAGACAATGACAGTGGAGAGTGTGACCCAGGCTGTGTCCAATCTGGCCCTCCAGTTTGGAGAAGAAGATGCAGATCCAGGCGCCATGTCTCGTCCTTTCGGAGTAGCACTGTTATTTGGAGGAGTTGATGAGAAGGGACCCCAGCTGTTTCACATGGACCCATCTGGGACCTTTGTACAGTGTGATGCTCGAGCAATCGGCTCTGCTTCAGAGGGTGCCCAGAGCTCCTTGCAAGAAGTTTACCACAAGTCTATGACACTGAAAGAAGCCATCAAGTCTTCACTTATCATCCTCAAACAAGTAATGGAGGAGAAGCTGAATGCAACTAACATAGAGCTAGCTACGGTGCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGAAGAACTTGAAGAGGTTATCAAGGACATTTAA

Related Sequences

XP_004853686.1 Protein

Psma5 PREDICTED: proteasome subunit alpha type-5 [Heterocephalus glaber]

Length: 241 aa      
>XP_004853686.1
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI