Details from NCBI annotation

Gene Symbol Clcc1
Gene Name chloride channel CLIC-like 1, transcript variant X2
Entrez Gene ID 101722225

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLCC1 ENSCPOG00000001079 (Guinea pig)

Gene Details

chloride channel CLIC-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000975, Guinea pig)

Protein Percentage 85.85%
CDS Percentage 90.69%
Ka/Ks Ratio 0.37887 (Ka = 0.0734, Ks = 0.1936)

CLCC1 ENSG00000121940 (Human)

Gene Details

chloride channel CLIC-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000358988, Human)

Protein Percentage 83.33%
CDS Percentage 86.73%
Ka/Ks Ratio 0.30684 (Ka = 0.1004, Ks = 0.3273)

Clcc1 ENSMUSG00000027884 (Mouse)

Gene Details

chloride channel CLIC-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102224, Mouse)

Protein Percentage 76.58%
CDS Percentage 80.92%
Ka/Ks Ratio 0.26576 (Ka = 0.1454, Ks = 0.5471)

Clcc1 ENSRNOG00000020360 (Rat)

Gene Details

chloride channel CLIC-like 1 (Clcc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042185, Rat)

Protein Percentage 74.77%
CDS Percentage 81.26%
Ka/Ks Ratio 0.32875 (Ka = 0.156, Ks = 0.4746)

Genome Location

Sequence Coding sequence

Length: 1713 bp    Location: 4738302..4705198   Strand: -
>XM_004853608.1
ATGAGCAGGCGCGGTTTGCTGGCGTTCGCCGTAGGGTTGTGCGGGGTCGGATCGTCGTCGGCTCCGGCTGGTCAGACAGCCCTACACAGGATGCTATGTTCTCTGCTCCTCTGTGAGTGTCTGCTGCTGCTCACTGGCTGTGCTCATGATGACGACTGGATTGACCCCACAGACATGCTCAACTATGATGCCGCTTCAGGAACAATGAGAAAAGCTCAGGTGAAGTATGGTATATCAGAGAAAAAAGATGTCAGTCCTGAATGGTCACATGCTGATGAAATGTCAGAATGTTATAACAGAGTTGATTCTTTAACTCATAAGATTGATGAGTGTGAAAAGAAAAAGAGGAAAGACTATGAAAGTCAAAGTAATCCTGTTTTTAGGAGATACCTAAATAAGATCTTAATTGAAGCTGGAAAGCTTGGACTTCCTGATGAAAACAAAGGTGATATGCATTATGATGCTGAGATTATCCTTAAAAGACAAACCTTACTAGAAATACAGAAGTTTCTCGGTGGAGAGGAATGGAAACCAGGAGCCCTGGATGATGCACTGAGTGATATTTTAATTAACTTTAAGCTTCATGATTTTGAAACATGGAAGTGGCGATTTGAAGATTCCTTTGGAATGGATCCATACAGTGTGTTGATGGTACTCCTGTGTCTGCTCTGCATTGTGATGTTAGTAGCTACCGAGCTGTGGACACGTGTTCGTTGGTACACCCAGTTGAGACGTGTTTTTATCATCAGTTTTCTTGTCAGTTTGGGATGGAATTGGATGTATTTATATAAGCTAGCTTTTGCACAGCACCAGGCTGAAATTGCCAAGATGGAGCCATTAGGCAATGCGTGTGCAGAGAAGATGGATTGGACTGGCAGTCTCTGGGAATGGTTCAGAAGTTCATGGACCTATAAGGATGACCCATGCCAAAAATACTATGAGCTCTTATTAGTCAACCCTATTTGGTTGGTTCCACCAACAAAGGCACTTGCAGTTACATTTACCAACTTTGTAACAGAACCATTAAAGCACATTGGAAAAGGAACTGGTGAATTTATTAAAGCACTCATGAAGGAGATCCCAGTGTTACTTCAGATTCCTGTGTTGATAATTATGGCACTGGCCGTCCTGAGTTTCTGCTATGGTGCTGGAAAGTCAGTTAGTGTGATGAGACATTTAGGTGGTCCTGAGAGAGAACTTCCCCGGGCACTGAAGCCAGGTGATCGAAGACGGCAGGAGGAAATTGATGATAGACTCGGTGGAGCAGGTGATGCAGATTTCTATTACAGGGGCCATTCTGCCTCCCTTGAGCAAGGCCCTTATGACAAAACACGTGAATGTAGAAAAGATGTTTTGAGGGAGACAGACATTGACTTGAGATTTCAGACTGGCAACAAGAGCCCTGAAGTGATCCGGGCATTTGATTTACCAGACACAGAGGCACAAGAGCATCCCAAGGTGGTACCCAGTCATAAATCACCTATTCTGGATACAAAGTCTGGAGAGATTGGTGGCATCACAGGAGAAAGCACTGGGACAGAAAGCAGCCAGGCTGCTAAGCCTGCCTCTGGCCAAGCAGTCTCAGGAGCCCCCGAAGGCTCACTTGGCGTGGAAAAGGCCCCGCTGAAGAGTGAAGCTGAAGGCAGCCCCCAGAAGGGCAGTGTATGCAGCCCAGCATGCGGAAGGGATCCTATTAGCAGCCCCTGCGGCTAG

Related Sequences

XP_004853665.1 Protein

Clcc1 PREDICTED: chloride channel CLIC-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 570 aa      View alignments
>XP_004853665.1
MSRRGLLAFAVGLCGVGSSSAPAGQTALHRMLCSLLLCECLLLLTGCAHDDDWIDPTDMLNYDAASGTMRKAQVKYGISEKKDVSPEWSHADEMSECYNRVDSLTHKIDECEKKKRKDYESQSNPVFRRYLNKILIEAGKLGLPDENKGDMHYDAEIILKRQTLLEIQKFLGGEEWKPGALDDALSDILINFKLHDFETWKWRFEDSFGMDPYSVLMVLLCLLCIVMLVATELWTRVRWYTQLRRVFIISFLVSLGWNWMYLYKLAFAQHQAEIAKMEPLGNACAEKMDWTGSLWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTNFVTEPLKHIGKGTGEFIKALMKEIPVLLQIPVLIIMALAVLSFCYGAGKSVSVMRHLGGPERELPRALKPGDRRRQEEIDDRLGGAGDADFYYRGHSASLEQGPYDKTRECRKDVLRETDIDLRFQTGNKSPEVIRAFDLPDTEAQEHPKVVPSHKSPILDTKSGEIGGITGESTGTESSQAAKPASGQAVSGAPEGSLGVEKAPLKSEAEGSPQKGSVCSPACGRDPISSPCG