| Gene Symbol | Rc3h1 |
|---|---|
| Gene Name | ring finger and CCCH-type domains 1 |
| Entrez Gene ID | 101698119 |
For more information consult the page for NW_004624771.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
| Protein Percentage | 93.9% |
|---|---|
| CDS Percentage | 92.75% |
| Ka/Ks Ratio | 0.19228 (Ka = 0.0371, Ks = 0.1929) |
ring finger and CCCH-type domains 1
| Protein Percentage | 94.27% |
|---|---|
| CDS Percentage | 91.84% |
| Ka/Ks Ratio | 0.11253 (Ka = 0.0295, Ks = 0.262) |
RING CCCH (C3H) domains 1
| Protein Percentage | 91.61% |
|---|---|
| CDS Percentage | 88.21% |
| Ka/Ks Ratio | 0.1197 (Ka = 0.0469, Ks = 0.392) |
| Protein Percentage | 84.77% |
|---|---|
| CDS Percentage | 83.53% |
| Ka/Ks Ratio | 0.22064 (Ka = 0.1051, Ks = 0.4763) |
>XM_004853573.1 ATGCCTGTACAAGCTCCACAATGGACGGATTTCCTTTCCTGCCCAATTTGCACTCAGACTTTCGACGAAACAATTCGAAAACCTATCAGTTTGGGTTGTGGCCATACTGTCTGCAAGATGTGCCTGAATAAACTCCACCGCAAGGCTTGCCCATTTGACCAGACCACTATCAATACAGACATTGAGCTCCTCCCTGTGAACTCAGCATTGCTACAGCTAGTGGGTGCTCAGGTCCCTGAGCAGCAGCCCATTACATTGTGTAGTGGTGTTGAAGATACAAAGCATTATGAGGAAGCCAAGAAATGTGTAGAAGAATTAGCATTGTACCTGAAACCGCTCAGCAGTGCTAGAGGAGTGGGTTTGAATAGCACTACTCAGAGTGTTCTCAGTCGCCCGATGCAAAGGAAGCTTGTGACTCTGGTCCACTGCCAACTAGTGGAGGAAGAAGGCAGAATTCGTGCCATGAGAGCTGCTCGATCTTTAGGTGAACGAACAGTTACAGAGCTCATTCTCCAGCACCAGAATCCTCAGCAACTCTCTTCCAACCTTTGGGCAGCAGTCAGAGCTAGGGGCTGTCAGTTCCTTGGACCAGCGATGCAAGAGGAAGCTTTAAAGCTGGTTCTCCTGGCCTTAGAAGATGGTTCTGCTTTGTCAAGAAAAGTATTGGTTCTCTTTGTGGTGCAGAGGTTGGAGCCACGGTTTCCTCAAGCCTCTAAGACTAGCATTGGTCATGTTGTTCAGCTTCTTTATAGAGCTTCTTGCTTTAAGGTCACCAAGCGTGATGAAGATTCTTCTTTGATGCAGCTGAAAGAAGAATTCAGAACCTATGAAGCTTTGCGACGAGAGCATGATTCCCAGATAGTGCAGATTGCTATGGAAGCAGGCTTGAGAATTGCACCAGATCAATGGTCCTCTCTGCTTTATGGAGACCAGTCTCATAAATCTCATATGCAGTCCATTATTGACAAGTTGCAGACCCCAGCCTCTTTTGCACAGAGCGTTCAGGAACTAACAATTGCTCTCCAGAGGACTGGAGACCCAGCAAACTTGAACCGCCTAAGACCCCATTTGGAGCTATTAGCAAATATTGACCCTAGTCCAGATGCTCCTCCTCCTACATGGGAACAGCTAGAAAATGGGCTGGTTGCTGTGCGTACCGTGGTACATGGCCTGGTTGATTATATTCAGAACCACAGCAAAAAAGGAGCAGATCAACAGCAGGGTCCCCCAGCCCTATTCCGTAAAATGAACAAACGTCTGGTCCCTAGAAGACCCCTGAGTGCCTCTTTGGGTCAGCTTAATGAGGTGGGCCTGCCTTCAACAGCAATCCTTCCAGATGAAGCTGCAGTGGATCTGCCTAGCAGAAAAGCCTCTGCTCTGCCCAATGGAATTGTGTCATCAGGGAACGCAGTAACACAGCTCATCCCACGAGGCACGGACCCCAGCTATGATTCTAGTCTGAAACCAGGAAAGATAGATCATCTGAGCAGTAGTGCTCCCGGATCCCCTCCTGATCTGCTAGAGTCTGTCCCTCAAAGTATTTCTGCCTTACCTGTGACTACACATCCCGTACCTCAGAGGGGGCCACCAGAGCTGCCTCCCCTGCCTGTCACCAAGCCCCTTCAGATGGTACCTCGAAGTTCTCAGTTATACCCACCACAGCAAGCTGATGTTTATTATCAGGATCCTCGAGGAGCTGCCCCACCATTTGAACCAGCACCTTATCAGCAGGGGATGTACTATACTCCACCACCACAGTGTGTGTCCCGCTTTGTCCGACCTCCACCATCTGCTCCTGAAGGTGGTCCTCCATACTTGGATCATTATTCACCCTACCTCCAAGATCGTGTTGTAAGCTCTCAGTATGGCACACAGCCTCAACAGTACCCAGCTATGTACCCACCTCACTATGACGGCCGTCGAGTGTACCCTGCTCAGTCTTACACAGCAAGAGAAGAGATTTTCAGAGAAAGTCCTATACCCATTGAGATTCCGCCTGCAGCAGTACCATCTTATGTACCAGAGACCAGAGAAAGGTACCAGCAGATGGAAGGTTACTACCCAGTGGCTCCTCATCCAACTCAGATCAGACCTTCATATCCCAGAGAGCCTCCTTATGGCCGACTTCCTCCTCCTCCACAGCCGCATCCTAGTCTGGATGAACTGCATCGTAGACGAAAGGAAATAATGGCCCAGTTAGAGGAAAGAAAGGTTATCTCTCCACCTCCTTTTGCACCTTCACCAACATTACCACCTGCATTCCATCAAGAGGAATTTTTGGATGACGAATTGAAGGTAGCTGGGAAATACAAAACAAATGATTATAGCCAATACTCTCCTTGGTCATGTGACACCATTGGCTCCTACATTGGAACCAAAGATGCAAAACCCAAAGATGTTGTGGCAGCAGGGAGTGTGGAAATGATGAATGTAGACACTAAAGGAATGCGAGACCAGCGATTGGATCTTCAAAGAAGAGCAGTAGAAACCAGTGATGATGACCTTATCCCATTTGGAGACCGACCAACAGTATCTAGGTTTGGTGCCATCTCTCGAACGTCCAAAACGATATATCAGGGTGCTGGCCCAGTGCAGGCTATGGCACCTCAGGGAGCTCCTACAAAATCTGTTAACATTTCAGATTATAGTCCATATGGAGCCCATGGTGGCTGGGGAGGCTCTCCATATTCACCCCATCAAAGTATACCTTCTCAGGGACACTTCAGTGAGAGGGAGAGAATTTCCATGGCAGAAGTGGCCAGTCATGGAAAGCCCCTTCCGTCTGCTGAGAGAGAACAGCTCCGACTAGAACTGCAACAACTGAACCATCAGATTAGCCAACAGACCCAGCTACGGGGATTGGAGGCTGTTAGTAACAGGCTGGTGTTGCAGAGGGAGCCAAATGCCCTGGCAGGCCAGCCGCAGCCCCCACCTCCACCTCCAAAGTGGCCTGCAATGATCTCCAGTGAGCAGCTGAGCTTGGAACTGCACCAGGTGGAAAGGGAAATTGGGAAGAGAACTCGGGAGCTCAGTATGGAGAATCAGTGTTCTCTGGACATGAAAAGCAAATTGAATACAAGTAAGCAACCAGAAAATGGACAACCAGAACCACAAAACAAGGTTCCAGCTGAGGACCTTACATTGACATTCAGTGATGTACCGAACGGATCATCCTTGGCACAAGAGGATATCAGCCTCCTGTCAAACAAGACCAGCTCTCTGAACCTGTCAGAGGAACCCGAGGGCAGAGGGGATGACAGTGACTCCCAGAGATCGAGAGTTACTCCCAGTTCTGCTCCCTAA
Rc3h1 PREDICTED: probable E3 ubiquitin-protein ligase Roquin [Heterocephalus glaber]
Length: 1100 aa View alignments>XP_004853630.1 MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQGPPALFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPDEAAVDLPSRKASALPNGIVSSGNAVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLLESVPQSISALPVTTHPVPQRGPPELPPLPVTKPLQMVPRSSQLYPPQQADVYYQDPRGAAPPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEGGPPYLDHYSPYLQDRVVSSQYGTQPQQYPAMYPPHYDGRRVYPAQSYTAREEIFRESPIPIEIPPAAVPSYVPETRERYQQMEGYYPVAPHPTQIRPSYPREPPYGRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPAFHQEEFLDDELKVAGKYKTNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEMMNVDTKGMRDQRLDLQRRAVETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPVQAMAPQGAPTKSVNISDYSPYGAHGGWGGSPYSPHQSIPSQGHFSERERISMAEVASHGKPLPSAEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREPNALAGQPQPPPPPPKWPAMISSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQPENGQPEPQNKVPAEDLTLTFSDVPNGSSLAQEDISLLSNKTSSLNLSEEPEGRGDDSDSQRSRVTPSSAP