Sequence details NCBI ID: XM_004853548.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vash2
Gene Name vasohibin 2, transcript variant X1
Entrez Gene ID 101715471

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VASH2 ENSCPOG00000003871 (Guinea pig)

Gene Details

vasohibin 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003495, Guinea pig)

Protein Percentage 96.61%
CDS Percentage 92.66%
Ka/Ks Ratio 0.04025 (Ka = 0.0147, Ks = 0.3655)

VASH2 ENSG00000143494 (Human)

Gene Details

vasohibin 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000355932, Human)

Protein Percentage 94.84%
CDS Percentage 91.94%
Ka/Ks Ratio 0.05703 (Ka = 0.0222, Ks = 0.39)

Vash2 ENSMUSG00000037568 (Mouse)

Gene Details

vasohibin 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036768, Mouse)

Protein Percentage 94.63%
CDS Percentage 88.14%
Ka/Ks Ratio 0.03622 (Ka = 0.026, Ks = 0.719)

Genome Location

Sequence Coding sequence

Length: 1065 bp    Location: 18303664..18332674   Strand: +
Raw sequence   
>XM_004853548.1
ATGACTGGCTCGGCGGCCGACACTCACCGCTGCCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCGGAGGAAGAGGACAGAGACGGTGGGGTGCTGTTCCACGTGAACAAGAGCGGCTTCCCCATGGACAGCCACACCTGGGAGCGCATGTGGATGCACGTGGCCAAGGTGCACCCCAAGGGCGGAGAGGTGGTGGGGGCCATCCGGGACGCCACCTTTTTGGCAAAGCCTTCAATACCCCAGGTCCCAAACTACAGGCTGTCCATGACGATCCCAGACTGGCTCCAGGCGATCCAGAATTACATGAAGACGCTACAATATAATCACACGGGGACCCAGTTCTTTGAAATTAGGAAAATGAGACCACTGAGCGGGTTAATGGAAACAGCGAAGGAAATGACCCGAGAGTCCTTGCCTATCAAATGCCTTGAAGCTGTCATCCTGGGCATATACTTAACCAATGGGCAGCCCTCTGTTGAGCGATTCCCCATCAGCTTTAAAACCTACTTCTCAGGAAATTACTTTCACCACGTTGTGCTGGGAATATACTGCAATGGCCGGTATGGCTCACTGGGCATGAGCCGAAGGGCTGAGCTGATGGACAAGCCACTGACCTTTCGGACTCTCAGTGACCTTGTCTTTGACTTTGAAGACTCCTACAAGAAGTACCTGCACACAGTCAAGAAGGTCAAGATTGGGCTCTGTGTCCCCCATGAGCCTCATAGCTTCCAACCCATCGAATGGAAGCAGCTGGTTCTCAATGTCTCAAAGATGCTGAGGGCCGACATAAGGAAGGAGCTGGAGAAATATGCCAGGGACTTGAGGATGAAGATCTTGAAGCCTTCGAGTGCCCATTCTCCGACCCAGGTGAGAAGCCGGGGGAAATCCCTGTCGCCTCGAAGGAGACCGGCAAGTCCCCCGAGAAGGTTCGCCAGGCGAGACAAGTCGCCTGCCCTGGCTGAGAAGAAGGTGGATCTCAGCACCCTGAATGAAGTGGGTTATCAGATCCGAATCTAG

Related Sequences

XP_004853605.1 Protein

Vash2 PREDICTED: vasohibin-2 isoform X1 [Heterocephalus glaber]

Length: 354 aa      View alignments
>XP_004853605.1
MTGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDRDGGVLFHVNKSGFPMDSHTWERMWMHVAKVHPKGGEVVGAIRDATFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKTLQYNHTGTQFFEIRKMRPLSGLMETAKEMTRESLPIKCLEAVILGIYLTNGQPSVERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRTLSDLVFDFEDSYKKYLHTVKKVKIGLCVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDLRMKILKPSSAHSPTQVRSRGKSLSPRRRPASPPRRFARRDKSPALAEKKVDLSTLNEVGYQIRI