Details from NCBI annotation

Gene Symbol Vamp4
Gene Name vesicle-associated membrane protein 4, transcript variant X2
Entrez Gene ID 101704828

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VAMP4 ENSCPOG00000014647 (Guinea pig)

Gene Details

vesicle-associated membrane protein 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013198, Guinea pig)

Protein Percentage 95.74%
CDS Percentage 95.27%
Ka/Ks Ratio 0.11774 (Ka = 0.019, Ks = 0.1613)

VAMP4 ENSG00000117533 (Human)

Gene Details

vesicle-associated membrane protein 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000236192, Human)

Protein Percentage 95.74%
CDS Percentage 95.27%
Ka/Ks Ratio 0.11088 (Ka = 0.0187, Ks = 0.1688)

Vamp4 ENSMUSG00000026696 (Mouse)

Gene Details

vesicle-associated membrane protein 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000121977, Mouse)

Protein Percentage 90.07%
CDS Percentage 90.31%
Ka/Ks Ratio 0.14026 (Ka = 0.0535, Ks = 0.3812)

Vamp4 ENSRNOG00000003071 (Rat)

Gene Details

vesicle-associated membrane protein 4 (Vamp4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004243, Rat)

Protein Percentage 90.07%
CDS Percentage 90.54%
Ka/Ks Ratio 0.16611 (Ka = 0.0545, Ks = 0.3282)

Genome Location

Sequence Coding sequence

Length: 426 bp    Location: 9995362..10034112   Strand: +
>XM_004853439.1
ATGCCTCCCAAATTCAAGCGCCACCTAAATGATGATGACGTCACTGGTTCTGTGAGAAGTGAAAGGAGAAATCTTTTGGAAGATGATTCAGATGAAGAAGAGGACTTTTTTCTAAGGGGACCATCTGGACCAAGATTTGGACCTAGAAATGATAAAATTAAGCATGTTCAGAATCAGGTGGATGAAGTTATTGATGTCATGCAAGAAAATATTACAAAGGTAATTGAAAGAGGGGAGAGACTAGATGAACTACAGGACAAATCAGAAAGCTTATCGGATAATGCAACTGCTTTTAGCAACAGATCCAAACACCTTCGAAGGCAAATGTGGTGGCGTGGATGCAAAATAAAAGCTATCATGGCTTTGGTTGCTGTTTTCCTCTTGCTAGTGATCATAATTCTTATAGTTGTGAAATATCATACTTGA

Related Sequences

XP_004853496.1 Protein

Vamp4 PREDICTED: vesicle-associated membrane protein 4 isoform X2 [Heterocephalus glaber]

Length: 141 aa      View alignments
>XP_004853496.1
MPPKFKRHLNDDDVTGSVRSERRNLLEDDSDEEEDFFLRGPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKHLRRQMWWRGCKIKAIMALVAVFLLLVIIILIVVKYHT