Details from NCBI annotation

Gene Symbol Tnr
Gene Name tenascin R, transcript variant X3
Entrez Gene ID 101716740

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNR ENSCPOG00000007606 (Guinea pig)

Gene Details

tenascin R

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006855, Guinea pig)

Protein Percentage 95.29%
CDS Percentage 93.5%
Ka/Ks Ratio 0.09463 (Ka = 0.0219, Ks = 0.2311)

TNR ENSG00000116147 (Human)

Gene Details

tenascin R

External Links

Gene Match (Ensembl Protein ID: ENSP00000356646, Human)

Protein Percentage 93.45%
CDS Percentage 90.75%
Ka/Ks Ratio 0.09111 (Ka = 0.0325, Ks = 0.3563)

Tnr ENSMUSG00000015829 (Mouse)

Gene Details

tenascin R

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107298, Mouse)

Protein Percentage 91.97%
CDS Percentage 87.8%
Ka/Ks Ratio 0.07823 (Ka = 0.0408, Ks = 0.522)

Tnr ENSRNOG00000002468 (Rat)

Gene Details

tenascin R

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003407, Rat)

Protein Percentage 91.86%
CDS Percentage 87.86%
Ka/Ks Ratio 0.08364 (Ka = 0.0425, Ks = 0.5082)

Genome Location

Sequence Coding sequence

Length: 4080 bp    Location: 6621996..6724677   Strand: +
>XM_004853395.1
ATGGGGATGGTTGGGGAAACAGTGGCACTGAAGAACATGCTCATTGGCGTCAACCTGATCCTGCTGGGCTCCATGCTCAAGCCCTCGGAGTGTCAGCTGGAGGTGACCACAGAAAGGGTCCACAGACAGGCAGTGGAGGAGGAAGGAGGCATTGGCAACTACAGCGCACCCAGCAAAGAGCAGCCCGTGGTCTTCAACCATGTATACAACATTAACATGCCCCTGGACAGCCTCTGCTCCTCCTCGGGGCTGGAGGCCTCTGCTGAGCAGGAGGTGAGTGCAGAAGACGAGGCTCTGGCAGAGTACACTGGCCAAACCTCAGACCACGAGAGCCAGGTCACCTTCACCCACAAGATCAACCTCCCCAAAAAGGCCTGCCCATGTGCCAGCTCAGGCCACGTGCTACGGGAGCTGCTGAGCCGGATCGAGACGCTGGAGAGGGAGGTGTCAGTGCTGCGGGACCAGTGCACCACCAATTGCTGCCAGGAAAGCACCGCCACAGGACAACTGGACTATATCCCTCACTGCAGTGGCCATGGCAACTTCAGCCTGGAGTCCTGTGGCTGCATCTGCAATGAAGGCTGGTTTGGCAAGAACTGCTCAGAACCCTACTGCCCGCTGGGCTGCTCCAGCCGGGGCGTGTGCATGGACGGTCAGTGCATCTGCGACAGCGAATACAGCGGGGACGACTGCTCCGAGCTCCGGTGCCCAACAGACTGCAACTCCCGGGGGCTCTGCGTGGATGGGGAGTGTGTCTGTGAAGAGCCCTACACGGGCGAGGACTGCAGGGAGCTGAGGTGCCCTGGGGACTGCTCAGGGAAGGGGAGATGTATCAATGGCACCTGTCTATGCCAGGAAGGCTACATTGGTGAGGACTGCGGGCAGCAGCGGTGCCTGAACGCCTGCAGTGGCCAAGGACCCTGCCAAGAGGGGTTCTGTGTCTGTGAAGAGGGCTACCAGGGCCCTGACTGCTCAGCAGTTGCCCCTCCAGAGGACTTGCGAGTGGCTGGTATCAGCGACAGGTCCATTGAGCTGGAATGGGACGGGCCGATGGCAGTGACGGAATATGTGATCTCTTACCAGCCGACGGCCCTGGGGGGCCTCCGGCTCCAACAGCGGGTGCCTGGAGATGGGAGTGGTGTCACCATCACGGAGCTGGAGCCAGGGCTCACGTACAACATCAGCGTCTCCGCTGTCATTAGCAACATCCGCAGCCTTCCCATCACTGCCAGGGCAGCCACTCATCTCTCCACTCCTCAAGGACTGCGATTCAAGACCATCACAGAAACCACGGTGGAGGTGCAGTGGGAGCCCTTCTCCTTCTCCTTCGATGGGTGGGAGATCAGCTTCATTCCAAAGAACAATGAAGGAGGAGTGATTGCCCAGCTCCCCAGCGATGTCACCTCCTTTAACCAGACAGGATTAAAACCTGGGGAGGAGTACATTGTCAATGTGGTGGCACTAAAAGAGCAAGCACGGAGCCCCCCAACCTCAGCCAGCGTGTCCACTGTCATAGATGGGCCCACACAGATCCTGGTACGAGATGTCTCCGACACAGTGGCCTTTGTGGAGTGGACCCCTCCTCGTGCCAAAGTCGATTTCATTCTCCTGAAATATGGCCTGTTGGGTGGGGAAGGTGGGAAGACCACCTTCCGGCTGCAGCCTCCCCTGAGCCAATACTCAGTGCAAGCCCTGCGGCCTGGCTCCCGCTATGAGGTGTCCATCAGTGCAGTCCGAGGGACCAATGAGAGCGAGTCTACGACCACCCAGTTCACCACAGAGATTGATGCTCCCAAGAATTTGCGAGTTGGTTCCCGCACAGCAACCAGCCTTGACCTTGAGTGGGATAACAGTGAGGCAGAAGTGCAGGAGTACAAGGTCGTGTACAGCACCCTGGCAGGGGAGCAATACCATGAGATGCTGGTCCTCAAGGGCATCGGTCCCACCACCAGGGCCACCCTCACAGATCTGGTACCTGGCACTGAGTACGGAGTTGGAATATCTGCCGTCATGAACTCACAGCAAAGTGTGCCAGCCACCATGAATGCCAGGACTGAACTTGACATCCCCCGAGACCTCATGGTGACAGCCTCCTCGGAGACCTCCATCTCCCTCATCTGGACCAAGGCCAGTGGCCCCATTGACCACTACCGGATTACCTTTACACCGTCCTCTGGGATTGCCTCAGAAGTCACTGTGCCAAAGGACAGGACCTCATATACACTGACAGATCTAGAGCCTGGGGCAGAGTACATCATCTCCATCACTGCTGAGAGGGGTCGGCAGCAGAGCTTGGAGTCCACTGTGGATGCCTTCACAGGCTTCCGCCCTATCTCCCATTTGCACTTTTCTCATGTGACGTCCTCTAGTGTCAACATTACCTGGAGTGACCCATCTCCCCCAGCAGACAGACTCATTCTGAACTACAGTCCCCAGGATGAAGAAGAAGAAATGATGGAGGTCTCCTTGGATGCTACCAAGAGGCATTTTGTCCTGATGGGTTTACATCCAGCCACTGAGTATATTGTCAACCTGGTGGCTGTCCATGGCACAGTGACTTCTGAGCCCATCATGGGCTCCATCACCACAGGAATTGATCCTCCCAAAGACATCACAATTAGCAATGTGACCAAGGACTCAGTGATGGTCTCCTGGAGCCCTCCTGTTGCATCTTTTGATTACTACCGAGTATCATATCGACCCACCCAAGTGGGACGGCTGGACAGCTCAGTGGTGCCCAACACTGTGACCGAATTCACTATCAGCAGGCTGTACCCAGCTACTGAATATGAAATCAGTCTCAACAGTGTTCGAGGCAGGGAAGAGAGTGAGCGCATCTGCACTCTCGTGCACACAGCCATGGATAATCCTGTGAATCTGATTGCTACCAACATCACCCCAACACAAGCCCTGCTGCAGTGGAAGGCACCCGTGGGTGAAGTGGAGAACTATGTCATTGTTCTCACACACTTCACAGTTGCTGGAGAAACCATCCTGGTTGATGGACTTAGTGAGGAATTCCAGCTTGTGGACCTGCTTCCCAGCACCCACTATACTGTCACCATGTATGCTGCCAGTGGCCCTCTCACCAGTGGCACCATCAGCACCAACTTTTCTACCCTCCTGGACCCTCCAGCAAACCTGACTGCCAGTGAAGTCACTAGACAGAGTGCACTGATCTCCTGGCAGCCTCCCAGGGCAGAGATTGAGAATTACATTTTGACCTACAAATCTACCGATGGAAGCCGCAAAGAGCTGATTGTGGATGCAGAGGACACCTGGATCCGATTGGAAGGCCTGCTGGAAAACACAGACTACACAGTGCTCCTGCAGGCAGCTCAGGATGCTATGCGGAGCAGCCTCATCGCTACGGCCTTCACCACAGAGGGCCGAGTGTTCTCTCATCCTCAAGACTGTGCCCAGCATTTGATGAACGGAGACACTCTGAGTGGGGTTTACACCATCTTTCTCAATGGGGAGCTCAGCCAGAAGTTGCAAGTGTACTGCGACATGACCACGGATGGGGGCGGCTGGATTGTATTCCAGAGGCGTCAGAATGGCCAAACTGATTTCTTCCGGAAATGGGTTGACTACCGGGTTGGCTTTGGGAACCTGGAGGATGAGTTTTGGCTAGGGCTGGACAACATCCACAGGATCACAGCCCGGGGCCGCTACGAGCTACGCGTGGACATGCGGGACGGGCAGGAGGCCGCCTTCGCCCACTACGACAAGTTCTCTGTGGAAGACAGCAGAAGCCTGTACAAACTCCGCATAGGAAGCTACAATGGCACTGCGGGAGACTCCCTCAGCTACCACCAGGGACGCCCTTTCTCCACAGAGGACAGAGACAATGATGTTGCTGTTACTAACTGTGCCATGTCATACAAGGGCGCCTGGTGGTATAAGAACTGCCACCGGACCAACCTGAATGGGAAGTACGGGGAATCCAGGCACAGCCAGGGCATCAACTGGTACCACTGGAAAGGCCACGAGTTCTCCATACCCTTTGTGGAAATGAAGATGCGGCCCTACAACCACCGTCTCTCAGCCGGGAGGAAACGGCGGGCCTTGCAGTTCTGA

Related Sequences

XP_004853452.1 Protein

Tnr PREDICTED: tenascin-R isoform X3 [Heterocephalus glaber]

Length: 1359 aa      View alignments
>XP_004853452.1
MGMVGETVALKNMLIGVNLILLGSMLKPSECQLEVTTERVHRQAVEEEGGIGNYSAPSKEQPVVFNHVYNINMPLDSLCSSSGLEASAEQEVSAEDEALAEYTGQTSDHESQVTFTHKINLPKKACPCASSGHVLRELLSRIETLEREVSVLRDQCTTNCCQESTATGQLDYIPHCSGHGNFSLESCGCICNEGWFGKNCSEPYCPLGCSSRGVCMDGQCICDSEYSGDDCSELRCPTDCNSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRCINGTCLCQEGYIGEDCGQQRCLNACSGQGPCQEGFCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLRLQQRVPGDGSGVTITELEPGLTYNISVSAVISNIRSLPITARAATHLSTPQGLRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLLGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESESTTTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHEMLVLKGIGPTTRATLTDLVPGTEYGVGISAVMNSQQSVPATMNARTELDIPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHLHFSHVTSSSVNITWSDPSPPADRLILNYSPQDEEEEMMEVSLDATKRHFVLMGLHPATEYIVNLVAVHGTVTSEPIMGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRPTQVGRLDSSVVPNTVTEFTISRLYPATEYEISLNSVRGREESERICTLVHTAMDNPVNLIATNITPTQALLQWKAPVGEVENYVIVLTHFTVAGETILVDGLSEEFQLVDLLPSTHYTVTMYAASGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYILTYKSTDGSRKELIVDAEDTWIRLEGLLENTDYTVLLQAAQDAMRSSLIATAFTTEGRVFSHPQDCAQHLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWVDYRVGFGNLEDEFWLGLDNIHRITARGRYELRVDMRDGQEAAFAHYDKFSVEDSRSLYKLRIGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRLSAGRKRRALQF