Sequence details NCBI ID: XM_004853392.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rfwd2
Gene Name ring finger and WD repeat domain 2, E3 ubiquitin protein ligase, transcript variant X2
Entrez Gene ID 101715822

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RFWD2 ENSCPOG00000010759 (Guinea pig)

Gene Details

ring finger and WD repeat domain 2, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009659, Guinea pig)

Protein Percentage 97.94%
CDS Percentage 95.87%
Ka/Ks Ratio 0.07426 (Ka = 0.012, Ks = 0.1619)

RFWD2 ENSG00000143207 (Human)

Gene Details

ring finger and WD repeat domain 2, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000356641, Human)

Protein Percentage 97.05%
CDS Percentage 94.2%
Ka/Ks Ratio 0.06879 (Ka = 0.0148, Ks = 0.2146)

Rfwd2 ENSMUSG00000040782 (Mouse)

Gene Details

ring finger and WD repeat domain 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000076160, Mouse)

Protein Percentage 97.05%
CDS Percentage 92.29%
Ka/Ks Ratio 0.04615 (Ka = 0.0148, Ks = 0.3201)

Rfwd2 ENSRNOG00000042492 (Rat)

Gene Details

ring finger and WD repeat domain 2, E3 ubiquitin protein ligase (Rfwd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048511, Rat)

Protein Percentage 98.32%
CDS Percentage 91.59%
Ka/Ks Ratio 0.0249 (Ka = 0.0106, Ks = 0.4276)

Genome Location

Sequence Coding sequence

Length: 2151 bp    Location: 5922074..6119674   Strand: +
Raw sequence   
>XM_004853392.1
ATGTCCAGTAGCCGCCAGGCCGGGCCGGGCTCCGCTGGGACGAGCCCTGGCTCCTCGGCGGCCTCCTCGGTGACTTCCGCCTCCTCGTCCTTATCCTCGTCCCCGTCGCCCCCTTCCGTGGCAGCGGCGGCAGCCTTGGTGTCTGGCGGGGCGGCTCAGGCCGCGGGCTCCGGCGGCCTCGGGGGCCCGGGGCGGCCTGTGCTGGTGGCGGCCGCTGTGTCGGGAAGCGGCGGTGGGGCGGTGTCCGCGGGCCTGTCCCGGCTCAGCTGCGCGGCCAGGCCCAGCGCCGGCGTGGGAGGGAGCGGCTCCAACCTCAGCGGCGGCGGTGGCAGCAGCAGGAAGCGCCCTTTGCTCGCCCCCCTCTGCAACGGGCTCATCAACTCATACGAGGACAAAAGCAACGACTTCGTCTGCCCCATCTGCTTTGATATGATTGAGGAAGCATACATGACGAAATGTGGCCACAGCTTTTGCTACAAGTGTATTCATCAGAGTTTGGAGGACAATAATAGATGTCCCAAGTGTAACTATGTTGTGGACAATATTGACCATCTCTATCCTAATTTCTTGGTGAATGAACTCATTCTCAAACAGAAGCAAAGATTTGAGGAAAAGAGGTTCAAATTGGACCACTCAGTGAGTAGCACCAATGGCCACAGGTGGCAAATATTTCAAGATTTATTGGGAACTGATCAAGATAACCTTGATTTGGCCAATGTCAACCTCATGTTGGAGTTACTAGTACAGAAGAAGAAACAACTGGAAGCAGAATCACATGCAGCCCAACTACAGATCCTTATGGAATTCCTCAAAGTTGCAAGAAGAAATAAGAGAGAGCAACTGGAACAGATCCAGAAGGATCTAAGTGTTGTGGAAGAGGATATTAAAAGAGTGGAAGAAATGAGCGGCTTATACTCTCCTGTGAGTGAAGACAGCACAGTGCCTCAGTTTGAAGCTCCTTCTCCATCACACAGTAGTATTATTGATTCCACAGAATACAGCCAACCTCCAGGTTTCAGTGGCAGTAATCAGACAAAGAAACAGCCCTGGTATAACAGCACATTAGCATCAAGACGAAAACGACTAACTGCTCATTTTGAAGATTTAGAGCAATGTTATTTTTCTACAAGGATGTCTCATATCTCAGATGACAGCCGTACTGCAAGTCAGTTGGATGAGTTTCAGGAATGCTTGTCCAAATTTACTCGATATAATTCAGTCCGACCTTTGGCCACACTGTCATATGCTAGTGATCTTTATAATGGTTCCAGCATAGTCTCTAGTATTGAATTTGACCGGGATTGTGACTATTTTGCAATTGCTGGGGTTACAAAGAAGATTAAAGTGTATGAATATGGCACAGTCATCCAGGATGCAGTGGATATTCATTACCCTGAGAATGAAATGACCTGCAATTCCAAAATCAGCTGTATCAGTTGGAGTAGTTACCATAAGAACCTATTAGCTAGCAGTGATTATGAAGGCACTGTTATCCTATGGGATGGATTCACAGGACAGAGGTCAAAGGTCTACCAGGAGCATGAGAAGAGGTGTTGGAGTGTTGACTTTAATTTGATGGACCCTAAACTTTTGGCTTCAGGTTCTGATGATGCAAAAGTGAAGCTGTGGTCTACCAACCTAGACAATTCAGTGGCAAGCATTGAGGCAAAGGCTAATGTGTGCTGTGTTAAATTCAGCCCGTCTTCCAGATATCATTTGGCTTTTGGCTGTGCAGATCACTGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAGGGACACCGAAAAGCAGTGTCATATGCAAAGTTTGTGAGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGCCAGCTAAAACTGTGGAATGTAGGAAAGCCATACTGCCTACGTTCCTTCAAGGGTCATATCAATGAAAAAAACTTTGTAGGCCTTGCTTCCAACGGAGATTATATAGCTTGTGGAAGTGAGAACAATTCCCTGTACCTATATTATAAAGGACTTTCTAAGACTTTGTTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTGGATAAAGACCGAAAAGAAGATGATACAAATGAATTTGTCAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGATCCTGAATGA

Related Sequences

XP_004853449.1 Protein

Rfwd2 PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform X2 [Heterocephalus glaber]

Length: 716 aa      View alignments
>XP_004853449.1
MSSSRQAGPGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAAAAALVSGGAAQAAGSGGLGGPGRPVLVAAAVSGSGGGAVSAGLSRLSCAARPSAGVGGSGSNLSGGGGSSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKDLSVVEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSNQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSHISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGDPE