Details from NCBI annotation

Gene Symbol Sec16b
Gene Name SEC16 homolog B (S. cerevisiae)
Entrez Gene ID 101713248

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEC16B ENSCPOG00000005359 (Guinea pig)

Gene Details

SEC16 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004821, Guinea pig)

Protein Percentage 80.82%
CDS Percentage 87.57%
Ka/Ks Ratio 0.47003 (Ka = 0.1081, Ks = 0.2301)

SEC16B ENSG00000120341 (Human)

Gene Details

SEC16 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000308339, Human)

Protein Percentage 75.17%
CDS Percentage 81.82%
Ka/Ks Ratio 0.38537 (Ka = 0.1557, Ks = 0.404)

Sec16b ENSMUSG00000026589 (Mouse)

Gene Details

SEC16 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000083300, Mouse)

Protein Percentage 70.9%
CDS Percentage 78.22%
Ka/Ks Ratio 0.40332 (Ka = 0.1986, Ks = 0.4924)

Sec16b ENSRNOG00000005229 (Rat)

Gene Details

SEC16 homolog B (S. cerevisiae) (Sec16b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046286, Rat)

Protein Percentage 70.44%
CDS Percentage 78.7%
Ka/Ks Ratio 0.41881 (Ka = 0.1964, Ks = 0.469)

Genome Location

Sequence Coding sequence

Length: 3105 bp    Location: 4236979..4274020   Strand: +
>XM_004853385.1
ATGGAACCTCGGGCTCCCCAGTGGCCATCTTGGCCACAGGGGAGGCCCAGGGCACCAGTAAAGGACCCAGATCGAGGGCTTCAGAGTGGACATCATCGGCCCATTCCTCACTCTCATCACAATGGAGAAGGGTTCTATCAATGGCAAGAGGTCCACGGGAGTCCGAAGCTGCAGCAGGACCCCAGGGCAGACCACCAGCAGCCCTGCTATGCATCCAGGCCTGGGCGTGCAGTTGACTACTACGATGGGGGTTATCCCACTCACTTATGCTCCAGGGCAGGCTACGAGGATCCCTATCAGAGATACCTCTCTCCAGCATTGACAGATGAATACGCTTATGCAAGTTATTACTACAGTGGGCACCTGCAGCGGCGGCTCGAGGAAAGAGTGCCAAGGCAGGGGAGTCCTTATGTCTGGCATGAAGGTTATGGAGATCAAAAGTACCTCAATGAATATCATCGGGAAAACCGGAATAGTCCATTTGGAACAAATGAGACCCAATTCCACTCTACCAGCTGGAATACTTATAAAGACAGCACTGCTTCTAGCTCTGGACATGAGCAGCCTGGGGAACTCCTTCCAGAGAACCTGCTAACTAGAGCCCCAAAGAATAAGCCGTCATTGACCAGCAAGTCCAACCTTCTCCAGCAGCAGGAGTCTGGTCTCAGCTCCAGCAGCTATGAGCTCAGTCAGTACATGGCAGATGCCTCTGAGCAGTATGGTCCTGGGGCTTCAGCAGCTTGGAGTCCAGTTCATGCCGGGGTTGTCTCAGCAGTTGGTCCCAAGACACCCATGAAGTTCTACATCCCTCATGTGTCTGTGACTTTTGGGCCAGGAGGTCAGCTGGTGTGTGTGTGTCCCAGGTCTCCCACGGATGGGCAGGTGCCCCTTGTTGAACTGCACAGCATGGAGGTAATTCTTAATGACTCTGAGGCCCACGAGGAGATGAGAAGTTTCTCAGGACCCCTGATCAGGCAAGATGTACACAAGGTGGATATCATGACATTTTGCCAGCAGAAAGCAGCTCAGAGCCTCAAATCTGGGACACCAGGGAGCAGGGACTCGGCTCTACTTTGGCAACTATTAGTTCTCCTTTGTCGCCAGAATGGGTCCATGGTGGGGTCTGACATAGCTGAGCTGCTGATGCAAGACTGCAAGAAATTGGAGAAATACAAGCAACAGCCCCCCGTGGCCAACCTCATCAGCCTGATGGGTGAGGACTGGCCTGTGATGAACCCTGGGACCCGCAACCTGCTCACTGGGGAGATCCCCCCCACTGTGGAGACGCCGGAGCAGGTTGTGGAGAAGTTCACCAAGCTGCTGTACTATGGAAGAAAGAAGGAGGCCTTGGAGTGGGCAATGAAGAACCACTTGTGGGGTCACGCTTTGTTCCTATCCAGCAAGATGGACCCAAGGTCCTACAACTGGGTCATGAGTAGCTTCACCAGTACCCTGGCTCTCAACGACCCCCTGCAGACCATCTTCCAGCTCATGTCGGGGAGAATTCCACAAGCAGCCACGTGCTGTGGGGACAAGCAGTGGGGAGACTGGAGGCCCCACTTGGCCGTGATTCTGTCAAATCAGTCTGGGGACCCAGAACTGCATCAGCGTGCGATTGTCACCATGGGGGATACTCTGGCTGGGAAGGGGTTTGTGGAGGCAGCTCACTTCTGCTATCTCATGGCTCATGTGCCCTTTGGCCACTACACTGTGAAGACAGACCTTCTGGCCCTGCTGGGCAGTAGCCACAGTCAAGAGTTCTTGAAATTCGCAACCACCGAGGCTATCCAGAGGACGGAAATCTTCGAGTACTGCCAGATGCTGGGCCGCCCCAGATCTTTCATTCCTTCTTTCCAGGTGTATAAACTCCTTTACGCTTCCCGTCTGGTGGATTGTGGCCTGGCATCCCAGGCCTTGCATTACTGCGAGGCCATTGGCGCAGCTGTCCTGAGCCAGGGAGAGAGCAGTCACCCTGTGCTATTAGTGGAGCTCATCAAGCTTGCAGAGAGACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGGCGCCCTGGGGACAGGGACCTGGAGCCGGACTGGCTAGTACAAGTGCGGAGGCTGCACCAGGAGCTTGAGCAAAAGGCAACGGCAGACATCGGGGATCCTCATTCTGCTCGCTTAGATCTTTCCGGAGCCAAAGGAACAACAGACACTTTCTACCAGGATTTTTGGGGACATCAGGTCTCTGGGTCCCATTCAGCCCCATGGCCAACTCTGGAGCAGACAGGCCTAACCCAGCCTGGCCCCCTTACCCTGCAGCTGGGCCCCTACCCAGTGGATGGAGGTACCGGCCACACTGGGGCAGCAGTGCCTCCTTACTTGGTCCCTGAGACCTGCCCTCCAGGGACTGGTGATGGCCAGGGCAGTGTGGCAGTGATGGGGCCTCACGGAAGAGGGGCCTGGGAGGAGACACTGCCGACACACCCTGGCCCTGGAGAGAACACAGTGTCTCAAGAAACCTCCCAGCATTATGATAGTCAGAATGTCATTCCCAAAACTCAGGTACCACAGGCTCCCAGAGCACGAAGTTTCTCTGAGAATTCTGGTGTCTCAGTCCAGGAGGTTGAGGAAGAGTCCTCTGATGAAGCAGATAAAAAACAGTCCTCAAATGTTTCGCAGAGAGAAAAGTCAGGAGACCTGAAAGACAACACAAAGAGCTCAGGATTTGGCTGGTTCAGCTGGTTTAGATTGAAGCCCTCCAACAGCCTGTCTGAAGAAGACTCGTTATCGGACTGTACAGACTCTGAGCAGGCTTCGCCTCCCTGCCAGACCAGCCCTGGCCTCTCACCGACACTGCCTCTTGAGTCCCTATCCCTGCCAGGTGGCGATGAGCTCCCAGAATCCCTGTCCAGTGGGGGCACAGCTGAGAGTACTGGGATTGGAGGATTCTCAGGGCTCGAGAGTGTTTCTTCTGAGCTCTACTCCAAACCTGGTGTCCTGCCTCCTCCTCCCGCCTTGCAAGGAGCAGTTCCGCTCTACAACCCATCTCAGATTCCTCAGCTACCAGCTACCAGCCTGAATCGACCAAACCGCCTAGCTCAGCGCCGCTATCCAACCCAGCCATGCTGA

Related Sequences

XP_004853442.1 Protein

Sec16b PREDICTED: protein transport protein Sec16B [Heterocephalus glaber]

Length: 1034 aa      View alignments
>XP_004853442.1
MEPRAPQWPSWPQGRPRAPVKDPDRGLQSGHHRPIPHSHHNGEGFYQWQEVHGSPKLQQDPRADHQQPCYASRPGRAVDYYDGGYPTHLCSRAGYEDPYQRYLSPALTDEYAYASYYYSGHLQRRLEERVPRQGSPYVWHEGYGDQKYLNEYHRENRNSPFGTNETQFHSTSWNTYKDSTASSSGHEQPGELLPENLLTRAPKNKPSLTSKSNLLQQQESGLSSSSYELSQYMADASEQYGPGASAAWSPVHAGVVSAVGPKTPMKFYIPHVSVTFGPGGQLVCVCPRSPTDGQVPLVELHSMEVILNDSEAHEEMRSFSGPLIRQDVHKVDIMTFCQQKAAQSLKSGTPGSRDSALLWQLLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKQQPPVANLISLMGEDWPVMNPGTRNLLTGEIPPTVETPEQVVEKFTKLLYYGRKKEALEWAMKNHLWGHALFLSSKMDPRSYNWVMSSFTSTLALNDPLQTIFQLMSGRIPQAATCCGDKQWGDWRPHLAVILSNQSGDPELHQRAIVTMGDTLAGKGFVEAAHFCYLMAHVPFGHYTVKTDLLALLGSSHSQEFLKFATTEAIQRTEIFEYCQMLGRPRSFIPSFQVYKLLYASRLVDCGLASQALHYCEAIGAAVLSQGESSHPVLLVELIKLAERLKLSDPLVLERRPGDRDLEPDWLVQVRRLHQELEQKATADIGDPHSARLDLSGAKGTTDTFYQDFWGHQVSGSHSAPWPTLEQTGLTQPGPLTLQLGPYPVDGGTGHTGAAVPPYLVPETCPPGTGDGQGSVAVMGPHGRGAWEETLPTHPGPGENTVSQETSQHYDSQNVIPKTQVPQAPRARSFSENSGVSVQEVEEESSDEADKKQSSNVSQREKSGDLKDNTKSSGFGWFSWFRLKPSNSLSEEDSLSDCTDSEQASPPCQTSPGLSPTLPLESLSLPGGDELPESLSSGGTAESTGIGGFSGLESVSSELYSKPGVLPPPPALQGAVPLYNPSQIPQLPATSLNRPNRLAQRRYPTQPC