Sequence details NCBI ID: XM_004853356.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tdrd5
Gene Name tudor domain containing 5
Entrez Gene ID 101704115

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TDRD5 ENSCPOG00000003070 (Guinea pig)

Gene Details

tudor domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002779, Guinea pig)

Protein Percentage 86.11%
CDS Percentage 90.05%
Ka/Ks Ratio 0.40951 (Ka = 0.0808, Ks = 0.1973)

TDRD5 ENSG00000162782 (Human)

Gene Details

tudor domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000406052, Human)

Protein Percentage 80.88%
CDS Percentage 86.24%
Ka/Ks Ratio 0.39515 (Ka = 0.1145, Ks = 0.2896)

Tdrd5 ENSMUSG00000060985 (Mouse)

Gene Details

tudor domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000137298, Mouse)

Protein Percentage 76.76%
CDS Percentage 81.99%
Ka/Ks Ratio 0.30829 (Ka = 0.1406, Ks = 0.4562)

Tdrd5 ENSRNOG00000004018 (Rat)

Gene Details

tudor domain containing 5 (Tdrd5), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005353, Rat)

Protein Percentage 75.08%
CDS Percentage 78.91%
Ka/Ks Ratio 0.27713 (Ka = 0.1638, Ks = 0.5912)

Genome Location

Sequence Coding sequence

Length: 3102 bp    Location: 2817729..2714909   Strand: -
Raw sequence   
>XM_004853356.1
ATGTCAGAACAAGAGCGTATACAGGACTGTCTGAGGAAAGAAATAAGGTCACTTCTTATTTCCACTAAAGATGGTTTGACCCCACACCAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCGTCTACCACTCCGAATCCTCGGGTACCGGTCCACCATGGAGCTGGTGTTGGACATGCCTGATGTGGTTAGTGTCTGCCCCTGTGGGGATGGTAGTGTAATACTGAAAGCCATTCCAGATGAATCCACCAAAGGAATAGCAAGTTTAGTCGCAAAGCAGAGGAGTAGCCATAAGGTGCAAAACTCCACGCAGAAGGGAAGGGCCAGTGTTTGCTCTGGGACAAGTTCTCGTCGAGTGCCTTACCGAGGAAGGGTGCCCCCTATTCTTCCTGCAGTTGTGAAGAGTGAGTTAAAAGACCTCTTGGCATTGTCTCCTGTTCTCCTTTCTGATTTTGAAAAAGCATTTGCCAAGCGATTTGGACGATCGTTTCAGTATATGCAATATGGATTCATCTCTATGTTTGAAGTGCTGAATGCAGCTTCAGATGTTATTTCTGTAGAGCAGACCAGAGCAGGTTTTTTATTGATGCTGAAGAAGAGTATATCAGAGGAAAAGCATAGAGCGTGGCCAGCAGGTGAAATTTTTACCCAGCCATTTAGAATAAAACAACGAGGGTCATATTCTACAGGCTGTCCAGTTGCAAAGTCATATTTTTCACAACCGACTTCAAACATGGTACCACCAAAGCAAATAATGAACGTGGAGACAACTTCCATATTCAGTACAGGAAAGACTTCAAAGCTGAATCACACTGAAAAATTAAACCAGTTGGAGAACTCATTCAAGTCAGTTATTGCACAAATTGGACCTGGAGGGACAATTGATCCAGAACTAAAACATAAGATAAAATGTGTTGTATCTAAGTTTCCAGAGGGTTTGTTTATTTCTAAACTGCTTGGAGAGTTTGAGACAATTTTTAAAGAGCAACTTTCACCAAAGAACTTGGGCTTCTTAAATGTGACAGAACTTGTTGGAGCTCTAAGTGACATTCTTCGTGTTGAGTTTAGGGAAGGAGAACAAGACTTGCTAGTGTTTATTGCTGATATGAAGGCTATACCACCTGATGGAGATGCTTCATCAATCAGAAATTCGTGTTTTGTTCAATCAGATAAGAAAATAGAACCCAAAGCTTATGTCTCCAGTCCTAGAAATTCACCATCTACTGCTGCTGTTAAGGAGACTACGTGGGATTGCTCTTTGAGAAAACATAAAGATCCAGAACCGAAGATTTGTAAGGAGCCTAATCTGGTGGAACTAGAGATAAACAAACCACATCTCAACTTGTCAGTGGCAAATCATGATATCCCACCAGATGCTGTACAAGAAAAGAAATTATGCAGACTTCCACCATTAGATACCAGTGCCCTCGTGGGGGTCTTTGTGGAGTACATTATCTCTCCTAGTCAATTCTACGTCCGGATCTATAGCAGAGATTCATCAGAGTTACTGGAAGACATGATGATTGAAATGCGGCGCTGCTACTCTAACCAGCTGGTTTCTGAGCGATATACCATGCCAGAACATTTTATCCAACCGGGACATCTCTGTTGTGTAAGGATTTCTGAGGATAAGTGGTGGTATCGGGTTGTTATCCATCGAGTCCTTGGGAAAAATGAAGTTGAAGTGTTCTACCCAGACTTTGGAAATATTGGAACTGTGCAGAAGTCCTCTCTGAGGTTCCTGAAGTGCTGCTACACAAAGCTTCCAGCTCAGGCTATCCCTTGTTCTTTGGCTTGGGTAAGACCAGTAAAGGAACACTGGACATCCAGGGCTATTTTGCAGTTTCAGAAGTTATGTGGTTTAAAGCCATTAGTGGGAGTAGTGGATGAATATATAGATGGAATCCTTAACATTTTTCTCTGTGATACATCTTCAAATGAAGACATTTATTTCCATCATGTCTTGAGAACAGAGGGCCATGCTGTTGTATGTCGAGAAAATATCCCTTCTAAGGGTTTCAGAAACCTAAACCCTTTAGCTTTATACACTAAATCCATTGGAGGGCTGGATGATGTCTTGACAGACCTGGGTTATCTTTCCCAGCACCACTATTTTAATGAAGACCGAAAGATAAGTCCACAGTCTAAAGAGAATGAATTACATACCCTGCAATGTGCTAATGATAATCTGTCTTTAACTCACCTTAAATTTGTGTCAAAGGAGCCATTAAAGGATTCTGAATTCAGTTCTTTGAAAATTCAGAAGAAATGTGAAGATGATCCAAAGTGGTCCATCACAGAGCCAAAGGATCTGAAGGAAGAAAGTGAGGATGAGATCCCCACTGGCATGCCATGCCTGGAGTCAGTGACCATAGGTGATGATATTTGGGATGAGAATTGGCTGAAAATGGAAAAGGAAGGCGATGCTGTCTCCCATCTAGTCACCTCAAGTCTTGGTGGAAAGAAACAATATTCATCATGTGAAGAAATAGCACGAAAGGATTGTTGTTTTTCTCCACTCAAAGATAAATGGGATGATTTACAGCAACCTTCAACCCTTATGAATGGAATGAAAGTAGAAATTCAAAAACCAGTAGGGCTGAATGCTCAAGAAAAAAATACTGGTACAACCAAGATTGAAAAGGACATAGATTTGGAAGATTCTTTGGATTCTTCCACATTGCCCAAATTGGAAGAGTTTTACATCTCTTTAATCCAGTCACAGCAATCAGCAGAAGGGAGCCAGTTTGAACCTAACAGCATTCTCACTCAGCCAAAGCAAATCCAGCTATCCACAGCAGTATCCAGTTCAACTCCTACAGTTCTTGACTCCCCCCAAAAAGAGTCTGCTTCTGTGGAAAGCTCTCCAGGGAGCCAAAAGAATGAAGATTTTTCCAGCAGTACTATCCCAGCATTCAAGGAGAAGAGTCAAGGATCTATGGACCAACTGTCTTTTATTTTGTCTCCAGAGAACAAGATTTCTCAGAAGCTCTACATTCCTCGAAGCACAGCCACTGCTGCCTTAGGGGCTGCTGCACGGTTAGCTACATCCAGGAGCTTCCTGCGTTGGTACCCCCATGTGAAAAGGATGGAAGCATGA

Related Sequences

XP_004853413.1 Protein

Tdrd5 PREDICTED: tudor domain-containing protein 5 [Heterocephalus glaber]

Length: 1033 aa      View alignments
>XP_004853413.1
MSEQERIQDCLRKEIRSLLISTKDGLTPHQLEKEYLLMVGNRLPLRILGYRSTMELVLDMPDVVSVCPCGDGSVILKAIPDESTKGIASLVAKQRSSHKVQNSTQKGRASVCSGTSSRRVPYRGRVPPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFISMFEVLNAASDVISVEQTRAGFLLMLKKSISEEKHRAWPAGEIFTQPFRIKQRGSYSTGCPVAKSYFSQPTSNMVPPKQIMNVETTSIFSTGKTSKLNHTEKLNQLENSFKSVIAQIGPGGTIDPELKHKIKCVVSKFPEGLFISKLLGEFETIFKEQLSPKNLGFLNVTELVGALSDILRVEFREGEQDLLVFIADMKAIPPDGDASSIRNSCFVQSDKKIEPKAYVSSPRNSPSTAAVKETTWDCSLRKHKDPEPKICKEPNLVELEINKPHLNLSVANHDIPPDAVQEKKLCRLPPLDTSALVGVFVEYIISPSQFYVRIYSRDSSELLEDMMIEMRRCYSNQLVSERYTMPEHFIQPGHLCCVRISEDKWWYRVVIHRVLGKNEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVKEHWTSRAILQFQKLCGLKPLVGVVDEYIDGILNIFLCDTSSNEDIYFHHVLRTEGHAVVCRENIPSKGFRNLNPLALYTKSIGGLDDVLTDLGYLSQHHYFNEDRKISPQSKENELHTLQCANDNLSLTHLKFVSKEPLKDSEFSSLKIQKKCEDDPKWSITEPKDLKEESEDEIPTGMPCLESVTIGDDIWDENWLKMEKEGDAVSHLVTSSLGGKKQYSSCEEIARKDCCFSPLKDKWDDLQQPSTLMNGMKVEIQKPVGLNAQEKNTGTTKIEKDIDLEDSLDSSTLPKLEEFYISLIQSQQSAEGSQFEPNSILTQPKQIQLSTAVSSSTPTVLDSPQKESASVESSPGSQKNEDFSSSTIPAFKEKSQGSMDQLSFILSPENKISQKLYIPRSTATAALGAAARLATSRSFLRWYPHVKRMEA