Sequence details NCBI ID: XM_004853349.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cacna1e
Gene Name calcium channel, voltage-dependent, R type, alpha 1E subunit, transcript variant X1
Entrez Gene ID 101701145

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CACNA1E ENSCPOG00000014861 (Guinea pig)

Gene Details

calcium channel, voltage-dependent, R type, alpha 1E subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013390, Guinea pig)

Protein Percentage 98.7%
CDS Percentage 95.75%
Ka/Ks Ratio 0.04106 (Ka = 0.0067, Ks = 0.1644)

CACNA1E ENSG00000198216 (Human)

Gene Details

calcium channel, voltage-dependent, R type, alpha 1E subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000356545, Human)

Protein Percentage 97.32%
CDS Percentage 92.79%
Ka/Ks Ratio 0.03993 (Ka = 0.0129, Ks = 0.3224)

Cacna1e ENSMUSG00000004110 (Mouse)

Gene Details

calcium channel, voltage-dependent, R type, alpha 1E subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004214, Mouse)

Protein Percentage 97.1%
CDS Percentage 90.6%
Ka/Ks Ratio 0.03155 (Ka = 0.0144, Ks = 0.4576)

Cacna1e ENSRNOG00000002863 (Rat)

Gene Details

calcium channel, voltage-dependent, R type, alpha 1E subunit (Cacna1e), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003928, Rat)

Protein Percentage 97.17%
CDS Percentage 90.6%
Ka/Ks Ratio 0.03198 (Ka = 0.0144, Ks = 0.4488)

Genome Location

Sequence Coding sequence

Length: 6945 bp    Location: 1733262..2045483   Strand: +
Raw sequence   
>XM_004853349.1
ATGGCTCGCTTCGGGGAGGCGGTGGTCGGCAGGCCGGGGTCGGGAGATGGAGACTCGGACCAGAGCAGGAACCGGCAAGGAACCCCGGTGCCGGCCTCGGGGCCGGCGGCCGCCTACAAGCAGTCGAAAGCGCAGAGGGCGCGGACTATGGCTTTGTACAACCCCATTCCCGTCCGGCAGAACTGTTTCACCGTCAACAGATCCCTGTTCATCTTCGGAGAAGATAACATTGTCAGGAAATACGCCAAGAAGCTCATCGATTGGCCGCCATTTGAGTATATGATCTTGGCCACCATCATTGCCAACTGCATCGTCTTGGCCCTGGAGCAGCATCTTCCCGAGGATGACAAGACCCCGATGTCCCGAAGACTGGAGAAGACAGAACCATATTTCATTGGGATCTTCTGCTTCGAAGCTGGCATCAAAATCGTCGCCCTAGGGTTCATCTTCCATAAGGGTTCATACCTCCGCAATGGCTGGAATGTCATGGACTTCATTGTGGTCCTCAGTGGCATCCTGGCCACTGCGGGAACCCACTTCAACACTCACGTGGACCTGAGGACCCTCCGGGCTGTGCGTGTGCTAAGGCCCTTGAAGCTTGTGTCAGGGATTCCTAGCCTGCAGATTGTGTTGAAGTCCATCATGAAGGCCATGGTGCCACTTCTGCAGATTGGCCTTCTGCTCTTCTTTGCCATCCTTATGTTTGCAATCATTGGCTTGGAATTCTACAGTGGGAAATTACATCGAGCATGCTTCATGAATAATTCAGGTATTCTAGAAGGATTTGATCCCCCACACCCATGTGGTGTGCAAGGGTGCCCAGCTGGTTATGAATGCAAGGACTGGATCGGCCCCAATGATGGGATCACACAGTTTGATAACATCCTTTTTGCTGTGCTGACTGTCTTCCAGTGCATCACCATGGAAGGATGGACCACCGTGCTGTACAATACCAATGATGCCTTAGGAGCCACCTGGAATTGGCTGTACTTCATCCCCTTGATCATCATTGGATCCTTCTTTGTTTTGAACCTAGTCCTCGGAGTGCTTTCTGGGGAATTTGCCAAAGAGAGAGAGAGAGTGGAGAACAGGAGAGCATTCATGAAACTGCGACGCCAGCAGCAGATAGAGCGTGAGCTGAATGGCTACCGGGCCTGGATTGACAAAGCCGAGGAAGTCATGCTTGCTGAAGAAAATAAAAATGCTGGGACATCAGCCTTAGAAGTGCTTCGAAGGGCCACCATCAAAAGGAGCCGGACGGAGGCCATGACCCGAGACTCCAGCGATGAGCACTGCGTTGATATCTCTTCTGTGGGCACACCACTTGCCCGAGCCAGTATCAAGAGCACAAAGGTAGATGGAGCTTCCTATTTCCGGCACAAGGAAAGGCTTCTACGCATCTCTATTCGCCACATGGTTAAATCCCAGGTGTTTTACTGGATCGTCCTGAGCCTTGTGGCTCTCAACACTGCCTGCGTAGCCATCGTACATCACAACCAGCCCCAGTGGCTCACTCACCTCCTCTACTATGCAGAATTTTTGTTTCTGGGACTCTTCCTCTTGGAGATGTCCCTGAAGATGTATGGCATGGGGCCTCGCCTTTATTTTCACTCTTCATTCAACTGCTTTGATTTTGGGGTCACAGTGGGCAGCATCTTTGAAGTAGTCTGGGCAATCTTCAGACCTGGTACATCTTTTGGAATCAGTGTTTTGAGAGCTCTCCGGCTTCTAAGGATATTTAAAATAACCAAGTATTGGGCATCTCTTCGGAATTTGGTGGTCTCCTTGATGAGCTCCATGAAGTCCATCATCAGTTTGCTCTTCCTCCTCTTCCTCTTCATCGTTGTTTTTGCTCTACTAGGCATGCAGCTGTTTGGTGGCAGGTTTAACTTTAATGATGGAACTCCTTCAGCAAATTTTGATACCTTCCCTGCAGCTATTATGACTGTGTTCCAGATCCTGACAGGGGAGGACTGGAATGAGGTGATGTACAATGGGATCCGTTCCCAGGGTGGAGTCAGCTCAGGCATGTGGTCAGCCATCTACTTCATTGTGCTCACCTTGTTTGGAAACTATACACTACTGAATGTCTTCTTAGCCATTGCTGTGGACAATCTGGCCAATGCCCAGGAACTGACCAAGGATGAGCAGGAGGAAGAGGAGGCCTTCAATCAGAAACATGCACTTCAGAAGGCCAAGGAGGTCAGCCCGATGTCTGCACCCAACATGCCTTCTATCGAAAGAGACAGAAGGAGAAGACACCACATGTCGATGTGGGAGCCACGCAGCAGCCACCTGAGGGAGCGGAGGCGCCGGCACCACATGTCAGTGTGGGAGCAGCGCACCAGCCAGCTGAGGAGGCACATGCAGATGTCCAGCCAGGAGGCCCTCAACAAAGAGGAGGCCCCACCGATGAACCCCCTCAACCCCCTCAACCCTCTGAGCCCCCTCAACCCACTCAATGCCCACCCCAGCCTCTACCGGAGGTCCAGGCCCATTGAGGGCCTGGCCCTAGGCTTGGGCCTGGAAAAGTGTGAGGAAGAACGCATCAGTCGGGGGGGATCCCTCAAAGGGGACGGAGGGGACCTGACCGGTGCCCTGGACAACCAGAGGAGCCCCTTGTCCCTAGGCAAACGAGAGCCACCGTGGCTGGCCAGGCCTTGTCATGGGAACTGTGACCCCACCCAGCAGGAGGCTGGGGGAGGAGAGACTGTGGTGACCTTTGAGGATCGGGCCAGGCACAGGCAGAGCCAGAGGCGCAGCCGGCACCGTCGCGTCAGGACCGAAGGCAAAGAGTCTGCGTCGGCCTCCCGGAGCAGGTCTGCCAGCCAGGAGAGGAGTCTGGATGAAGTGGGGGCCCCTGAAGGGGAGAAGGACCATGAGTTCCGGGGCAGCCATGGTGGCAAGGAGCCAACGATCCATGAAGAAGAACAATCCCAGGACTTGAGGAGGACCAATAGTCTGATGGAGCCCAGAGGCTCTGGGCTTGCAGGAGCCCTTGATGAGCCAGACACACCCCTGGTCCTGCCCCAGCCTGAGCTGGAAGTGGGGAAGGACACAGTGCTGGCAGAGCAGGAGCCAGAGGGCAGCAGTGAGCAAGCCCTCCTGGGGGATGTACAGCTGGATGTGGGCCGAGGCATCAGTCAGAGTGAGCCCGACCTGTCCTGCATCACGGCCAGCACCGACAAAGCCGCCACGGAGAGCACCAGCGTCACCGTCGCCATCCCTGAAGTGGGCCCCTTGGTGGATTCGACAGTGGTGCACATTAGCAATAAGACTGATGGAGAAGCCAGTCCCTTGAAGGAGGCAGAGATCAAAGAGGAGGAGAACGAAGTAGAGAAGAAGAAGCAGAAAAAGGAGAAGCGAGAGACAGGCAAAGCCATGGTGCCTCACAGCTCCATGTTCATCTTCAGCACCACCAACCCGATCCGGAGGGCCTGCCACTACATTGTAAACCTGCGCTACTTTGAGATGTGCATTCTTCTGGTGATCGCAGCCAGCAGCATTGCCCTGGCAGCAGAGGACCCAGTCCTGACCAACTCGGAGCGCAACAAAGTCCTGAGATATTTCGACTATGTTTTCACAGGCGTGTTCACCTTTGAGATGGTTATAAAGATGATAGACCAAGGCTTGATCCTGCAGGATGGGTCCTACTTCCGAGACCTCTGGAACATCTTGGACTTTGTGGTGGTGGTTGGTGCATTGGTCGCCTTTGCTCTAGCGAACGCTTTGGGAACCAACAAGGGGCGTGACATCAAGACCATCAAGTCTCTTCGGGTGCTCCGAGTTCTGAGGCCCCTGAAAACAATCAAGCGCTTGCCCAAGCTCAAGGCTGTGTTCGACTGTGTGGTGACCTCCTTGAAGAATGTCTTCAACATACTCATTGTCTACAAGCTCTTCATGTTCATCTTTGCTGTCATCGCAGTTCAACTCTTCAAGGGAAAGTTCTTTTATTGTACAGACAGTTCCAAGGACACAGAGAAGGAGTGCATAGGCAACTATGTAGACCATGAAAAAAACAAGATGGAGGTGAAGGGCCGGGAATGGAAGCGCCATGAATTCCATTATGACAACATCATCTGGGCCCTGCTGACCCTCTTCACAGTTTCCACAGGGGAAGGATGGCCTCAGGTTCTGCAGCATTCTGTAGATGTGACAGAGGAGGACCGAGGCCCAAGCCGCAGCAACCGCATGGAAATGTCCATCTTTTACGTGGTCTACTTTGTGGTCTTTCCTTTCTTCTTTGTCAATATCTTCGTGGCTCTCATCATCATCACCTTCCAGGAGCAAGGAGACAAGATGATGGAGGAGTGTAGCCTGGAGAAGAATGAGCGGGCTTGCATTGACTTTGCCATCAGCGCCAAACCGCTCACCCGCTACATGCCACAGAACAGGCACACCTTCCAGTACCGTGTGTGGCACTTTGTGGTGTCTCCGTCCTTTGAGTACACCATCATGGCCATGATTGCCTTGAACACAGTGGTGCTGATGATGAAGTATTACTCTGCTCCCTGTACCTATGAGCTGGCCCTAAAGTACCTGAATATCGCCTTCACCATGGTGTTTTCCCTGGAATGTGTCCTGAAGGTCATCGCTTTTGGCTTCTTGAACTATTTCCGAGATACCTGGAATATCTTTGACTTCATCACCGTGATTGGCAGTATCACAGAAATTATCCTGACAGACAGCAAGCTGGTGAACACCAGTGGTTTCAATATGAGCTTTCTGAAGCTCTTCCGAGCTGCCCGTCTCATAAAGCTTCTGCGTCAGGGCTACACCATACGTATTTTACTTTGGACCTTTGTGCAGTCCTTCAAGGCCCTCCCCTATGTCTGCCTTTTGATTGCCATGCTTTTCTTCATTTATGCCATCATTGGGATGCAGGTATTTGGAAACATAAAATTAGATGAGGAGAGTCATATCAACCGGCACAACAATTTCCGGAGTTTCTTTGGGTCCCTCATGTTACTCTTCAGGAGTGCCACAGGTGAAGCCTGGCAGGAGATTATGCTGTCGTGCCTTGGGGAGAAAGGCTGCGAGCCTGACACCACTGCACCGTCTGGGCAGAATGAGAATGAGCGCTGTGGCACTGACCTGGCCTATGTTTACTTTGTCTCTTTCATCTTCTTCTGCTCCTTCCTGATGCTCAACCTGTTTGTGGCTGTCATCATGGACAACTTTGAGTACCTGACTCGGGACTCCTCCATCCTGGGACCTCACCATTTGGACGAGTTTGTCCGAGTGTGGGCAGAATATGACAGAGCAGCATGTGGCCGCATCCATTACACTGAGATGTATGAAATGCTGACTCTCATGTCACCACCGCTAGGCCTCGGCAAGAGATGTCCCTCCAAAGTGGCATATAAGAGGTTGGTCCTGATGAACATGCCAGTAGCTGAGGATATGACTGTCCACTTCACCTCTACACTAATGGCTCTGATCCGGACAGCTCTGGACATTAAAATCGCCAAAGGTGGTGCAGACAGGCAGCAGCTAGACTCGGAGCTACAAAAGGAGACCCTGGCCATCTGGCCACACTTGTCCCAGAAGATGCTGGATCTGCTTGTGCCCATGCCCAAAGCCTCTGACCTGACTGTGGGCAAAATCTATGCAGCAATGATGATCATGGACTACTACAAACAGAGTAAAGTAAAGAAGCAGAGGCAACAACTAGAGGAACAGAAAAATGCACCCATGTTCCAGCGTATGGAGCCCTCGTCTCTGCCTCAGGAGATCATTGCTAATGCCAAAGCCCTGCCTTATCTCCAGCAGGACCCTGTTTCAGGCCTGAGTGGCCGGAGTGGATACCCTTCCATGAGTCCACTCTCCCCTCAGGAAATATTCCAGTTGGCTTGTATGGACCCAGCTGATGATGGACAATTCCAGGAACAACAATCTCTGGAGCCAGAGGTTAGTGAATTAAAAAGCGTGCAGTCCTCTAATTATGGCATCTACCTTCCTTCGGACACCCAGGAGCATGCGGGATCTGGGAGGGCATCCTCTATGCCACGTCTGACTATGGATCCCCAGGTGGTGACAGACCCTAGCTCCATGAGACGTTCATTTTCTACCATTCGGGATAAGCGTTCAAATTCCTCATGGTTGGAGGAATTCTCCATGGAGCGAAGCAGTGAAAATACCTACAAGTCTCGTCGCCGGAGTTACCACTCTTCCCTGCGGCTGTCAGCCCACCGCCTAAACTCAGATTCAGGCCACAAGTCTGACACCCATCGCTCAGGGGGCAGGGAGCGGGGACGATCCAAAGAGCGAAAGCATCTTCTCTCTCCTGATGTCTCCCGTTGCAATTCTGAGGAGCGAGGGACTCAGGCTGACTGGGACTCCCCAGAGCGCCATCAGTCCAGGTCACCCAGTGAGGGCAGGTCGCAGACGCCCAACAGACAGGGAACAGGTTCCCTGAGTGAAAGCTCCATCCCTTCCGTTTCTGACACCAGCACCCCAAGACGAAGTCGTCGGCAGCTCCCACCTGTCCCACCAAAGCCTCGGCCCCTCCTTTCCTACAGTTCCCTGATGCGACATGCTGGCAGCATCTCTCCACCAGCTGATGGAAGCGAGGGTGGATCTCCTCTGACCTCCCAAGCACTGGAGAGCAACAATGCTTGCCTGACCGAGTCTTCCAACTCCCCACACCCCCAGCAGGGCCAGCACTTTTCCCCCCAGCGCTACATCTCTGAGCCCTACCTGGCCCTGCATGAAGACTCCCATGCCTCAGACTGTGGTGAGGAGGAGACACTCACCTTTGAAGCGGCTGTGGCTACAAGCCTGGGTCGGTCCAACACCATTGGCTCAGCCCCACCCCTGCGGCACAGCTGGCAGATGCCCAATGGGCATTATCGGCGACGGAGGCGTGGGGGGCCTGGGCCCGGCACGATGTGTGGAGCTGTCAGTGACCTCCTGAGTGACACAGAAGAAGACGACAAATGCTAG

Related Sequences

XP_004853406.1 Protein

Cacna1e PREDICTED: voltage-dependent R-type calcium channel subunit alpha-1E isoform X1 [Heterocephalus glaber]

Length: 2314 aa      
>XP_004853406.1
MARFGEAVVGRPGSGDGDSDQSRNRQGTPVPASGPAAAYKQSKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFMNNSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNAGTSALEVLRRATIKRSRTEAMTRDSSDEHCVDISSVGTPLARASIKSTKVDGASYFRHKERLLRISIRHMVKSQVFYWIVLSLVALNTACVAIVHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNMPSIERDRRRRHHMSMWEPRSSHLRERRRRHHMSVWEQRTSQLRRHMQMSSQEALNKEEAPPMNPLNPLNPLSPLNPLNAHPSLYRRSRPIEGLALGLGLEKCEEERISRGGSLKGDGGDLTGALDNQRSPLSLGKREPPWLARPCHGNCDPTQQEAGGGETVVTFEDRARHRQSQRRSRHRRVRTEGKESASASRSRSASQERSLDEVGAPEGEKDHEFRGSHGGKEPTIHEEEQSQDLRRTNSLMEPRGSGLAGALDEPDTPLVLPQPELEVGKDTVLAEQEPEGSSEQALLGDVQLDVGRGISQSEPDLSCITASTDKAATESTSVTVAIPEVGPLVDSTVVHISNKTDGEASPLKEAEIKEEENEVEKKKQKKEKRETGKAMVPHSSMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESHINRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDTTAPSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQLDSELQKETLAIWPHLSQKMLDLLVPMPKASDLTVGKIYAAMMIMDYYKQSKVKKQRQQLEEQKNAPMFQRMEPSSLPQEIIANAKALPYLQQDPVSGLSGRSGYPSMSPLSPQEIFQLACMDPADDGQFQEQQSLEPEVSELKSVQSSNYGIYLPSDTQEHAGSGRASSMPRLTMDPQVVTDPSSMRRSFSTIRDKRSNSSWLEEFSMERSSENTYKSRRRSYHSSLRLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVSRCNSEERGTQADWDSPERHQSRSPSEGRSQTPNRQGTGSLSESSIPSVSDTSTPRRSRRQLPPVPPKPRPLLSYSSLMRHAGSISPPADGSEGGSPLTSQALESNNACLTESSNSPHPQQGQHFSPQRYISEPYLALHEDSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQMPNGHYRRRRRGGPGPGTMCGAVSDLLSDTEEDDKC