Details from NCBI annotation

Gene Symbol Tmem200c
Gene Name transmembrane protein 200C
Entrez Gene ID 101716989

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM200C ENSG00000206432 (Human)

Gene Details

transmembrane protein 200C

External Links

Gene Match (Ensembl Protein ID: ENSP00000463375, Human)

Protein Percentage 74.73%
CDS Percentage 81.35%
Ka/Ks Ratio 0.14517 (Ka = 0.1372, Ks = 0.9451)

Tmem200c ENSMUSG00000095407 (Mouse)

Gene Details

transmembrane protein 200C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000137246, Mouse)

Protein Percentage 70.99%
CDS Percentage 75.08%
Ka/Ks Ratio 0.1263 (Ka = 0.1802, Ks = 1.4268)

Tmem200c ENSRNOG00000049880 (Rat)

Gene Details

transmembrane protein 200C (Tmem200c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064607, Rat)

Protein Percentage 72.56%
CDS Percentage 76.53%
Ka/Ks Ratio 0.13377 (Ka = 0.1663, Ks = 1.2428)

Genome Location

Sequence Coding sequence

Length: 1677 bp    Location: 15516355..15512059   Strand: -
>XM_004853310.1
ATGATCGCCACCGGCGGCCTGCTGAGGATTTCCGCCCGCAAGCAGGATCCCCTGCGCCCCCCGGGCCAGGTGCCCAAGCGCAAGCGCAAGGCCAAGAAGAGGCGCAAGAACGACGTGGTGGTGGTGAAAGGCAAGCTGAAGCTGTGCTCCGTCTCGGGGCTCATCGCCCTGTGCGGAATCCTGGTGCTGCTGGTGGGGATCGCCCTGGCCGTGGTGGGCTACTGGCCCAAAGCTGGGGGGGCCGCAGGGGAGGGGGCCAGGCAGCTGCCCCCCGCGGGCCCTGAGCACCGCGCCCTGGCCAGCGGCAGCGGCCGCGCCCCGCCTAGGAGCGCCTCGGGGGACGCCCCCTCCAGCTCGGAAAGTGTGCCCCGAAGCACGCACGCGCCCGCTCCGTCCTCGCCCGCGCCCGCGGGCTTCTTCTTCCGCGTCTTCTCGGGCTACCTGCACTCTGACAAGCTCAAGGTCTTCGGGCCCCTCATCATGGGCATCGGCATCTTCCTCTTCATCTGCGCCAACGCCGTGCTGCACGAGAACCGCGACAAGAAGACCAAGGTCATCAACCTGCGGGACCTCTACTCCACTGTCATCGACGTGCACAGCCTCCGTGCCAAGGACCCGGACGCCGCCGCCGCCGCGCCCCCGGGGCCCGCGCCGCTCAACGGCTTCCCGGGCCGCGTGCAACTGCGCGGCCTGGAGCGGACGCCGGCGCTGCTGGCCCGCGGCGCCTGGCGCCCCCGCGCGGCGTCCCCGGCAGACCTGGCCTCGTCCCCCCGCCGCCCGCCCGAGCCCCCGAGCCTGGCTGAGGCGGTGTACAGCATCTGCCGCGAGCGTGCCGGTGTGGCCGGCCGCCCCCAGACCGCGGCGCCCCCGGCCGCCAGCGGCTGCAGCAGCCCGGCGCCCTGCAGCCCGCCCGGGAGCTGGGGACGCCCGAGCACTGCCAGCTCGCTCGTGGGCTCCTCGCTGAGCGCTTTCGCGCTGCTGCCCTTGCCCGGGGACCGCGAGCGAGACGGGGACGCGGAGGGCGCGAGCTGCAGCTGGCGGAAGTCGCCCTGGGAGCGAGGCCCCCGGGAGCTCCCGCGGGGCGGCGCCCTCGACCTGAGCCTGGCCGACCTCCGCGGCGCCGAGGGCGGCGCTCCCTGGGCGCACGGCGCGCTGGGGAAGCCAGAGAGCGGGGGCCAGGGCGGCCGCCTGCCCAGGACCGGCAGGTACGCAGCCCTGCGGCGCCGCAGCACCAGCGGGCTCCCGGACTACCGTGCCCCGCCGTCGCCGGAGACCCCGCCTTCCCCGAGGGGCGCGGACCCCGGCTCCGCCCATCCCGACGCAGCCTCCTCCCCCTCGCCTCCCCCGCACCTGGAGGAATCGCCCGGGGCCAGCAGGCGGGACTCGCAGAGCTCACAATCGGACGACCCGTCCGCCAGCAGCAATAAGGGCTACACCCCCCTGCGGGAGGCCGGCACCTCCATGGAGTCGGTGGTGGACTCAGCGGACAGCCTCAGGCAAGACTGTGCAGCCGCCTCCGATGTGGGGGGCGAGCAGCACCTCCCTGAGGGTTCAGGCCGAGAGCCGCCCAAGGCCGAGCCACCCCACCCGGTGCAGAGGCAGTTTACAAACAAGGAGAAACTCTTCATGATCTCCCGGTCTCACGCCGTGGGGGCAGAAGAAAGCCCCGGGGACTAG

Related Sequences

XP_004853367.1 Protein

Tmem200c PREDICTED: transmembrane protein 200C [Heterocephalus glaber]

Length: 558 aa     
>XP_004853367.1
MIATGGLLRISARKQDPLRPPGQVPKRKRKAKKRRKNDVVVVKGKLKLCSVSGLIALCGILVLLVGIALAVVGYWPKAGGAAGEGARQLPPAGPEHRALASGSGRAPPRSASGDAPSSSESVPRSTHAPAPSSPAPAGFFFRVFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKVINLRDLYSTVIDVHSLRAKDPDAAAAAPPGPAPLNGFPGRVQLRGLERTPALLARGAWRPRAASPADLASSPRRPPEPPSLAEAVYSICRERAGVAGRPQTAAPPAASGCSSPAPCSPPGSWGRPSTASSLVGSSLSAFALLPLPGDRERDGDAEGASCSWRKSPWERGPRELPRGGALDLSLADLRGAEGGAPWAHGALGKPESGGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPETPPSPRGADPGSAHPDAASSPSPPPHLEESPGASRRDSQSSQSDDPSASSNKGYTPLREAGTSMESVVDSADSLRQDCAAASDVGGEQHLPEGSGREPPKAEPPHPVQRQFTNKEKLFMISRSHAVGAEESPGD