Sequence details NCBI ID: XM_004853295.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Dsg3
Gene Name desmoglein 3
Entrez Gene ID 101702663

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DSG3 ENSCPOG00000005404 (Guinea pig)

Gene Details

desmoglein 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004864, Guinea pig)

Protein Percentage 85.63%
CDS Percentage 88.31%
Ka/Ks Ratio 0.29907 (Ka = 0.083, Ks = 0.2777)

DSG3 ENSG00000134757 (Human)

Gene Details

desmoglein 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000257189, Human)

Protein Percentage 76.66%
CDS Percentage 82.37%
Ka/Ks Ratio 0.32233 (Ka = 0.142, Ks = 0.4406)

Dsg3 ENSMUSG00000056632 (Mouse)

Gene Details

desmoglein 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064718, Mouse)

Protein Percentage 75.39%
CDS Percentage 78.08%
Ka/Ks Ratio 0.21581 (Ka = 0.1566, Ks = 0.7257)

Dsg3 ENSRNOG00000016632 (Rat)

Gene Details

desmoglein 3 (Dsg3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022584, Rat)

Protein Percentage 74.4%
CDS Percentage 77.75%
Ka/Ks Ratio 0.21947 (Ka = 0.1613, Ks = 0.7352)

Genome Location

Sequence Coding sequence

Length: 2919 bp    Location: 1416517..1386803   Strand: -
Raw sequence   
>XM_004853295.1
ATGGTCTTTGTATTGGTTCATGGAGAATTACAGATAGAGACAAAAGAGCCCCATGGAGAAGATGAGACAGCAGTTCAACAGGGGAAAAGAAGGCACAAACGAGAGTGGGTGAAATTTGCAACGCCCTGCAGAGAAAGAGAAGACAACTCCAAAAGAAACCCCATTGCCAAGATTACTTCAGATTTCCAAACAACCCAGAAAATTACCTATAGAATTTCTGGGGTGGGAATTGATCAGCCTCCTTTTGGAATCTTTATTGTTAACCCAAACACGGGTGAAATTAATATAACAGCCATCGTTGACCGAGAGGAAACCCCAAGCTTCCTGATCACGTGTCGAGCTCTAAGTGTCCTAGGACAAGATGTAGAGAAACCGCTTATACTAACGGTCAAAATTTTAGATGTTAATGATAATGCTCCAGTATTTTCACAAAGAATATTCAAGGGCGAAATTGAAGAAAACAGTGCTTCAAACTCGCTGGTGATGATACTAAATGCCACAGACGCAGATGAGCCAAACCATCTGAACTCTAAAATCGCCTTCAAAATCGTCTCCCAGGAGCCCACAGGAACACCCACGTTCCTCATAAGCAGAAACACTGGAGAAGTCCGTACTTTGACCAATGGTCTCGATCGAGAGCAATTTAGCAGCTATCGGCTGGTTGTGAGTGGTGCAGACCAGGATGGAGTAGGACTGTCAACTCAATGTGAATGCGATATTAAAGTGAAAGATGTCAACGACAATTTCCCAGTGCTTAAATATTCTCAGTATTCAGCACGTATTGAGGAAAATACTGTAAGCTCTGACTTACTTCGATTTCAAGTGACAGATTGGGATGAAGAGTATACAGATAATTGGTTGGCCGTGTATTTCTTTACCTCTGGAAATGAAGGGAAGTGGTTTGAAATAGAAACTGACCCAAGGACCAATGAAGGCATCCTGAAAGTGGTAAAGCCTCTAGATTATGAACAAATACAAAGCATGCAATTTAGTATTGCTGTCAAAAATAAAGCTGAATTTCACCAGTCAGTAGTCTCTCAATATAGAGTTCAGTCAACCCCAGTCATAATTCAGATCATAGATGTAAAAGAAGGAATTGCATTCCGCCCTGCTTCCAAGACGTTTACTGTGAAAAAAGGCATTAGTAGTAAACACTTGATTAATTATATCGTGGGAATATATCAAGCCATCGATGAAGACACTAACATGGCTGCCTCATCTGTTAGATATGTCATGGGTCGTAATGATGGCAATTTGTTAACTATTGATCCAAAAACTGCTCAAATCAAATTTGTCAAAAACATCGCCCGGGATTCTACTTTCATAGTTAACAAGACAATCACAGCTGAGGTTCTGGCCATAGACGAAAACACGGGTAAAACTGCCACTGGCACCGTACATGTTGAAGTACCTGGATTTAATGACAATTGTCCACCAGTTGTCCTGGAAAAAGGTGAAATCTGTAGTTCGTCACCTTCCGTGGTTGTGTCAGCAAGAGCCCTGGAAAGAGACAGATACATGGGTTCCTACACATTTTCAGTGGAGGAGCAACCTCTAAAGTTGCCAGTTGTGTGGAGAATCACAACTCTCAATGCTACCTCGGCACTGGTAAGAGCCCAGCAGCAGATATCTCCTGGAGTGTACAGAGTCCCCCTCACGGTTACAGGCAACAAGGACCGGAATTGCGAGTCCTCGGAGACCTTGACCCTGACGGTCTGTCAGTGTAACGACAGGGGCTCCTGTAGAAGTTCAAACACTGACCCTCATATCCAGCCCCAGAGGCAGCTGTCCAGGCTGGGGCCCGACGCCATCGGTTTGCTCCTTCTCGGGCTTTTGCTGCTGCTGTTGGTCCCTCTCCTACTGCTAACCTGTGACTGTCAAAGGGGTCCCACTGGGGGAGTGGCAGGTGGTTTTATTCCAGTTCCTGATGGTTCAGAAGGAACAATTCATCAGTGGGGAATTGAAGGAGCTCAACCTGAGGACAAGGAAATCACAAATATTTGTGTGCCACCTATAACAACTAATGGAGTAGATATTGTGGAGAATTCTGAAGTTTGTACAAATACATATACCGGAGGGACAGTGGTGGAAGGTGTTTCTGGAATGGAACTGACCACCAAGGTGGGAGCAGCTACAGGGTCTGGAGCTGTGCCGGGATTTGGAGCAGCAGCTGCACTAGGCCCCTGTCCCCTGGGGCATCTGGGACTTGAAACTATGAGAACAAGACATTCCACCAGGGGAACCCTGAAGGACTATGCAGAGGGGGCCATAAACATGAATTTCCTAGATTCCTACTTTTCCCAGAAAGCATTTGTCTGTGCAGAGGAAGAGGGTATCCAAGAAGCAAATGACTGCTTGCTGATCTATGATAACGAAGGCACAGATGATGCTCCTGATTCTCCCGTGGGATCCCTGGATTGCTGTAGTTTTATTGTTGATGACCTGGATGACAGCTTCTTGGACTCACTTGGCCCCAAGTTTAAAAAACTTGCAGAGATAACCCTTGGTATTGATGAGGAAGCCAAACAAGCTCATTCACCCCCTCAATACAGTGGTCCTGGGATTGACCACAAGATGGACTCCTGTAGTCGACTCATAGAAGTCCAGCAGTCAGGACTTGAGAGGTACCAGACTTTGTCTGGCAGTCAAGAACCTCATGCTTTGTCTACCTATGGGTCGCTCCAGCCAGCCATTCCCATACCCGACCCTCTGCAGCATAGTAACTATTTGGTAACAGAGTCTTACTCAGCTTCAAGTTCCTTTATGCAACCTACCACTGCAGTCTTTGATCCACTTCTCACACGAAATGTAACAATGACAGAAAGGGTGATTTGTCCCCTTTCCAATATCCCCAGTTCCACAGACCCACAAGGGTCATGCAATATGCTTTGTACTGAAGATACTTGTTCCCGTCAGTGA

Related Sequences

XP_004853352.1 Protein

Dsg3 PREDICTED: desmoglein-3 [Heterocephalus glaber]

Length: 972 aa      View alignments
>XP_004853352.1
MVFVLVHGELQIETKEPHGEDETAVQQGKRRHKREWVKFATPCREREDNSKRNPIAKITSDFQTTQKITYRISGVGIDQPPFGIFIVNPNTGEINITAIVDREETPSFLITCRALSVLGQDVEKPLILTVKILDVNDNAPVFSQRIFKGEIEENSASNSLVMILNATDADEPNHLNSKIAFKIVSQEPTGTPTFLISRNTGEVRTLTNGLDREQFSSYRLVVSGADQDGVGLSTQCECDIKVKDVNDNFPVLKYSQYSARIEENTVSSDLLRFQVTDWDEEYTDNWLAVYFFTSGNEGKWFEIETDPRTNEGILKVVKPLDYEQIQSMQFSIAVKNKAEFHQSVVSQYRVQSTPVIIQIIDVKEGIAFRPASKTFTVKKGISSKHLINYIVGIYQAIDEDTNMAASSVRYVMGRNDGNLLTIDPKTAQIKFVKNIARDSTFIVNKTITAEVLAIDENTGKTATGTVHVEVPGFNDNCPPVVLEKGEICSSSPSVVVSARALERDRYMGSYTFSVEEQPLKLPVVWRITTLNATSALVRAQQQISPGVYRVPLTVTGNKDRNCESSETLTLTVCQCNDRGSCRSSNTDPHIQPQRQLSRLGPDAIGLLLLGLLLLLLVPLLLLTCDCQRGPTGGVAGGFIPVPDGSEGTIHQWGIEGAQPEDKEITNICVPPITTNGVDIVENSEVCTNTYTGGTVVEGVSGMELTTKVGAATGSGAVPGFGAAAALGPCPLGHLGLETMRTRHSTRGTLKDYAEGAINMNFLDSYFSQKAFVCAEEEGIQEANDCLLIYDNEGTDDAPDSPVGSLDCCSFIVDDLDDSFLDSLGPKFKKLAEITLGIDEEAKQAHSPPQYSGPGIDHKMDSCSRLIEVQQSGLERYQTLSGSQEPHALSTYGSLQPAIPIPDPLQHSNYLVTESYSASSSFMQPTTAVFDPLLTRNVTMTERVICPLSNIPSSTDPQGSCNMLCTEDTCSRQ