Sequence details NCBI ID: XM_004853280.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Seh1l
Gene Name SEH1-like (S. cerevisiae), transcript variant X2
Entrez Gene ID 101726416

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEH1L ENSCPOG00000006314 (Guinea pig)

Gene Details

SEH1-like (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005691, Guinea pig)

Protein Percentage 98.61%
CDS Percentage 93.15%
Ka/Ks Ratio 0.02295 (Ka = 0.0066, Ks = 0.2858)

SEH1L ENSG00000085415 (Human)

Gene Details

SEH1-like (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000382779, Human)

Protein Percentage 96.67%
CDS Percentage 88.8%
Ka/Ks Ratio 0.03187 (Ka = 0.0179, Ks = 0.5617)

Seh1l ENSMUSG00000079614 (Mouse)

Gene Details

SEH1-like (S. cerevisiae

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025421, Mouse)

Protein Percentage 96.11%
CDS Percentage 88.8%
Ka/Ks Ratio 0.03117 (Ka = 0.0177, Ks = 0.5673)

Genome Location

Sequence Coding sequence

Length: 1083 bp    Location: 19913546..19936488   Strand: +
Raw sequence   
>XM_004853280.1
ATGTTCGTGGCGCGCAGCATCGCGGCAGACCATAAGGACCTCATCCACGATGTCTCCTTCGACTTCCACGGGCGGCGCATGGCCACCTGCTCCAGCGACCAGAGCGTCAAGGTCTGGGATAAAAGCGAAAGTGGAGATTGGCATTGTACAGCTAGCTGGAAGACGCACAGTGGATCTGTGTGGCGTGTGACATGGGCCCATCCTGAATTTGGACAGGTTTTGGCTTCCTGTTCTTTTGATCGAACAGCCGCTGTGTGGGAAGAAATAGTCGGAGAGTCGAATGATAAGCTGCGTGGACAGAGTCACTGGGTGAAGAGGACCACACTGGTGGATAGCAGAACATCTGTTACTGATGTGAAGTTTGCTCCCAAGCACATGGGTCTCATGTTGGCCACCTGCTCAGCAGATGGAATAGTCCGGATATATGAGGCACCTGATGTCATGAATCTCAGCCAGTGGTCCCTACAGCATGAGATCTCTTGCAAACTGAGCTGCAGTTGCATTTCTTGGAACCCTTCAAGCTCCCGTGCTCACGCGCCCATGATCGCTGTAGGAAGTGATGACAGCAGCCCAAACGCCGTGGCCAAGGTTCAGATTTTTGAATACAATGAAAACACCAGGAAATATGCAAAAGCTGAGACTCTGCTGACTGTCACCGACCCAGTGCATGACATTGCCTTTGCTCCAAACTTGGGACGGTCTTTCCACACGCTGGCAGTTGCAACCAAAGATGTAAGAATTTTCACGTTAAAACCTGTGAGGAAAGAACTCACTTCCTCAGGTGGGCCAACAAAATTTGAAATCCATATCGTGGCTCAGTTTGATAACCACAACTCCCAGGTCTGGCGAGTGAGTTGGAACATTACAGGAACTGTGCTGGCATCTTCAGGAGATGACGGCTGTGTCAGGTTGTGGAAAGCTAATTACATGGACAATTGGAAGTGCACTGGGATTCTGAAAGGTAATGGGAGCCCAGTCAATGGGAGTTCTCAGCAGGGAAACTCAAATCCTTCCCTAGGTTCAAACGTTCCAAATCTTCAAAGCTCATTAAATGGATCTTCTGCTAGCAGAAAGCACAGCTGA

Related Sequences

XP_004853337.1 Protein

Seh1l PREDICTED: nucleoporin SEH1 isoform X2 [Heterocephalus glaber]

Length: 360 aa      View alignments
>XP_004853337.1
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHAPMIAVGSDDSSPNAVAKVQIFEYNENTRKYAKAETLLTVTDPVHDIAFAPNLGRSFHTLAVATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSLGSNVPNLQSSLNGSSASRKHS