Details from NCBI annotation

Gene Symbol Vapa
Gene Name VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa, transcript variant X2
Entrez Gene ID 101713962

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VAPA ENSCPOG00000006042 (Guinea pig)

Gene Details

VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005454, Guinea pig)

Protein Percentage 96.48%
CDS Percentage 95.01%
Ka/Ks Ratio 0.11815 (Ka = 0.0172, Ks = 0.1454)

VAPA ENSG00000101558 (Human)

Gene Details

VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000345656, Human)

Protein Percentage 97.19%
CDS Percentage 91.83%
Ka/Ks Ratio 0.04162 (Ka = 0.0136, Ks = 0.3256)

Vapa ENSMUSG00000024091 (Mouse)

Gene Details

vesicle-associated membrane protein, associated protein A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024897, Mouse)

Protein Percentage 95.58%
CDS Percentage 90.23%
Ka/Ks Ratio 0.05975 (Ka = 0.0232, Ks = 0.3884)

Mospd4 ENSRNOG00000003575 (Rat)

Gene Details

motile sperm domain containing 4 (Mospd4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004747, Rat)

Protein Percentage 70.68%
CDS Percentage 71.9%
Ka/Ks Ratio 0.13926 (Ka = 0.1928, Ks = 1.3847)

Genome Location

Sequence Coding sequence

Length: 750 bp    Location: 18411789..18447004   Strand: +
>XM_004853239.1
ATGGCGTCCGCCTCCGGGGCCATGGCGAAACACGAGCAGATCTTGGTCCTCGACCCGCCCACAGACCTCAAATTCAAAGGCCCCTTCACAGATGTAGTCACTACAAATCTTAAATTGCGAAATCCATCAGACAGAAAAGTGTGTTTCAAAGTGAAGACTACAGCACCTCGCCGGTACTGTGTGAGGCCCAACAGTGGAATTATTGACCCAGGGTCGACGGTGACTGTTTCAGTAATGTTACAGCCCTTTGATTATGATCCAAATGAAAAGAGCAAACACAAGTTTATGGTACAGACGATTTTTGCTCCACCAAACACTTCGGATATGGAAGCAGTGTGGAAAGAGGCAAAACCTGATGAATTAATGGATTCTAAATTGAGATGTGTATTTGAAATGCCGAATGAAAATGATAAATTGAACGATATGGAACCTAGCAAAGCTGTCCCGCTGAATGCATCTAAACAAGACGGACCCATGCCAAAACCGCACAGTGTTTCACTCAGTGATACTGAGACGCGGAAGCTCATGGAAGAGTGTAAAAGACTTCAGGGAGAAATGATGAAGCTGTCAGAAGAAAATCGACACCTGAGAGAGGAAGGCTTAAGGCTCAGGAAGGTAGCACATTCGGAGAAGCCTGGCTTGCCCTCGGCCACGTCCTTCAGAGACAACGTCACCAGTCCTCTCCCCTCACTCCTCGTTGTGATCGCAGCCATCTTCATCGGGTTCTTTCTAGGGAAGTTCATCTTGTAG

Related Sequences

XP_004853296.1 Protein

Vapa PREDICTED: vesicle-associated membrane protein-associated protein A isoform X2 [Heterocephalus glaber]

Length: 249 aa     
>XP_004853296.1
MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLSDTETRKLMEECKRLQGEMMKLSEENRHLREEGLRLRKVAHSEKPGLPSATSFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL