Sequence details NCBI ID: XM_004853222.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Soga2
Gene Name SOGA family member 2, transcript variant X2
Entrez Gene ID 101709035

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOGA2 ENSCPOG00000013933 (Guinea pig)

Gene Details

SOGA family member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012555, Guinea pig)

Protein Percentage 82.28%
CDS Percentage 85.34%
Ka/Ks Ratio 0.13397 (Ka = 0.094, Ks = 0.7015)

SOGA2 ENSG00000168502 (Human)

Gene Details

SOGA family member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000352927, Human)

Protein Percentage 76.95%
CDS Percentage 80.27%
Ka/Ks Ratio 0.11977 (Ka = 0.1297, Ks = 1.0828)

Soga2 ENSMUSG00000052105 (Mouse)

Gene Details

SOGA family member 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000083899, Mouse)

Protein Percentage 73.14%
CDS Percentage 76.4%
Ka/Ks Ratio 0.11307 (Ka = 0.1622, Ks = 1.4349)

Soga2 ENSRNOG00000025527 (Rat)

Gene Details

Protein Soga2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031219, Rat)

Protein Percentage 74.61%
CDS Percentage 77.57%
Ka/Ks Ratio 0.09338 (Ka = 0.145, Ks = 1.5526)

Genome Location

Sequence Coding sequence

Length: 5532 bp    Location: 17702793..17788072   Strand: +
Raw sequence   
>XM_004853222.1
ATGGAGACGCTGAGCGGCCCCGCGGGCGGCGCCCCGGACGCCAAGCCGCAGCCGCCCGGCGCCCGCCACCCGCTCCTCCTGCGCCCGCCGGCCGAGCGCAGGCGGCTGCACCGCGAGCCCTCGCCCGCCCGCCCCGCAACCTGGGCCCCGGGCCCCGCGCCCGCCGCTTTGCGCGCCCCGGTTCTCGCGGGCCGCCCGCCGTCGTCCTCGGGGCCCCCTGCCCAGCCCGGCAGCCTTTCCCGGCGCAGCACCGGCGTCCCGGGCGCGAAGGACAAGCCGCCGCCGGGCTTCGGGACCAGGACTGCGAGCGGCGCCAAGGCCGCCCTGGGAGCCCGCAAGGCGGCGCGCGCGGTGCCCAACGAGCCGCTGCCCCGCGCCGCGAAGCCGCCGGGGCCCGTGCCGCCCGGAGCCGCCGCCAAGGCCCACAGGGCTAAACGCGAACCCGGGGCGGCCCCCTCCCGCGCCCTTGCCTCCCCGAGCCCCACCGCCCGCGCCCCCAACGCGCGCCTCGCCGGGGCCCCGGGTGCGCGCGCGGGCCACACAGACAGCAGCTCTGATCTCTCCGACTGCGCCTCTGAGCCGCCCGCCGCCGGCAGCGACGCCGAGTCCGGCACCGGCTCCAGCGACCGCGAGCCCGCGCGGGGGGCGCCGCCCGGCAGCCCCGAGACCCTCGCGCTCCTCGCCGCGCCCGCCGCCGGCCTCGGGGGCCGCAGCAGCCCTGGCGGGGTCCCCCCAGGGTCTCCGGGGCGCGGCGCGGTGGACGATGGCGAGGGGCGCGTGCCGCCCGAGCGAGCGGTCCCGGGGACCCCACAGGAGTCCGGCCCGGGCCTGCAGCCGCGGCTCGGGCCGAGCTTGGAGGAGGAGGAGCTGCTTCGGGAGATGGAGGAGCTGCGCTCAGAGAACGACTACCTCAAGGATGAGCTGGATGAACTCCGTGCCGAGATGGAGGAGATGAGAGACAGCTATTTGGAGGAAGACGTGTACCAGCTGCAGGAACTTCGGCGAGAGCTGGACCGAGCTAACAAAAACTGCCGCATCCTGCAGTACCGACTCCGGAAGGCCGAGCAGAAGAGCCTGAAAGTAGCAGAGACCGGGCAGGTGGACGGCGAGCTTATCAGGAGTCTGGAGCAGGACCTGAAGGTAGCCAAAGACGTGTCTGTGCGGCTGCACCATGAGCTAGAGACTGTGGAGGAGAAGCGGACTAGAGCTGAGGATGAGAACGAGACGCTGCGGCAGCAGGTGATCGAGGTGGAGATAGCCAGGCAGGCCCTGCAGAACGAGCTGGAAAGGCAGAAGGAGAGTTTCCTGAAGAGAAGAGGCAGTCGGGAAATGTACAAGGAGAAGAAAACCCTCAGCCAGGATGACAGTGCCGACCTGAAGTGCCAGCTTCAGTTTGCCAAAGAAGAGGCCTCGCTGATGCGCAAGAAAATGGCCAAGCTGTGCAGGGAGAAGGACGAGCTGGAGCAGGAGCTGCAGAAGTACAAGTCCCTCTATGGGGACGTGGACAGCCCCCTGCCCACTGGGGAGGCCGGCGGGCCCCCCAGCACGCGAGAGGCTGAGCTGAAGCTGCGGCTCAGGCTGGTGGAGGAGGAAGCCAACATCCTGGGCCGCAAGATTGTGGAGCTGGAGGTGGAGAACCGGGGCCTCAAGGCGGAGATGGAGGACCTGCAGGTCCAGCACAAGCAGGAGGGAGCTGGCCAGGACCGTGTGCCCCGTGCCCCGACCTCACCCTTCGGGGACTCCCTGGAATCCTGTGCCGAGCTGCGCCGGCACCTGCAGTTTGTGGAGGAGGAGGCCACACTGCTGCGGAGGTCCATCTCCGAGATCGCGGCCCACAACCAGCAGCTGACCCACGAGCTGAGCAAATTCAAGTTCGAGCCCTGCCCGGAGCCAGGGTGGCGCAGGGACAGCCTGGGGAAGGGCACCATGGCCCCGCTGCAGGAGGAACTGCGGTCAGCCAGGCTGCAGATCAGCAAGCTCAGCGGGAAGGTGCTCAAGCTGCAGAGCGAGAACCTGGCGATGCTGTCCAGTGCCCACCTCGGGCTGCAGGCCCCGAGCCCCCGTGACAGCGACGCCAACAGCGACACCGGCCAGAAGGAGAGTGACGTGGAGGACGGCCGCCTGCCCCAGCCCAAGCGGGAGGGCCCTGTGGGTGGGGAGAGCGACTCGGATGAGACGGTCGAGAAGACGTCAGGCTTCGGGAGCCGAAAGCCGTCGGAGGCCAGCGAGCCCTGCCTGGCGGAGCTTCGGGGGCCCAAGGACGCCGAGCACCTGGTGGCCCTGAAGCGCAAGGCCCAGCAGCTGGAGCGCACCATGGAGCACCTCATCACCGACACCGACAGTTTCCTCCGGAACTCACCTGGGCTCCAGGCTGAGGGCGAGAGGGCCCTCGGGGGCCAGGACGAGCCTCACCTGCTGGGGGCCATCAACAGGAAGATGAAGGCCTTCCGGAAGGAGCTGCAGGCCTTCCTGGAGCAGGTGGCCCGCCTCGGGGACAGCCTGTCAGCCCTGCCCCACCACACGGAGTCATCCAGCTTCCTGTCCACCGTGACCTCCATGCCCCGGGACTCCCCTGTTGGGAACCTGGGGAAGGAGCTGGGCCCCGACGTGCAGTCCAGAATGAGAGACCAGCAGGAGTGGCGGCTGGGGCCAGACCGAGGGGAGGACCACGACAGCGCGCACCTCCACACTGCACAGGAGCTGCACCGCCGGGCCGATGGGGACACCGGGAGCCACTGTCCAGGAGGCCAGAGCTGCTTCAGTCCCAAGATGGAGGAGGAGCACCTGTACGCACTGCGCTGGAAGGAGCTGGAGATGCAGAGCCTGGCGCTGCAGAGCACACTGCACACACGCACCTGGGGCGAGGAGCGGATGCTGCTGCAGCAGGAGCTGGGGGTGCTGAGGCAGAGCATCTTCCTCTTCTACCTCAAGCTGCGGTGGCTGCTGAAGCACTGGCGGCAGGCGAAGCAGGCAGGCGGCAGTGGGGAGGACGGCGCAGAGGGCGAGCATCCAGAGACCCTCCCCAGGCTCGGGGAGCTCGGAGTCCAGGGGTGCCTCCAGGCAGACGGGCTGGAGCACAGTGACGGTGACCGAGGCTGTGCCTTTCCGGTGGGGGAGGCTGCTCCATGCGCCCCAGTGCAGATCGGCGACCACGCATCGCGGCTGCAGACTGTGGACGGGGCGCCACTCCACAGGCAGGTGGTGGAGCACTGGCAGCTGTTCAGCACCCTCAAGGCCCTGCTGGAGGACTTCCGCTCCGAGCTGTGGGAGGACGAACTGGCCCGGCGGCGCCTGCAGCAGCAGTACGCCAGCGACAAGGCGGCCTGGGACGTGGAGTGGGCTGTGCTCAAGTGCCGCCTGCAGCAGCTGGAGGAGAAGACAGAGAAGAGCCTGGGTGAGCCCGACGCCGTGGTGGAGAGCAAGGGCGCACTGAAGAGGGAGCGGGAGGCGCACCAGAAGCTGCTGGCCGACAGCCACGGCCTGGTCCTGGACCTGCGCTGGCAGATGCACCACCGCGAGAAGAGTTGGAGGCGCGAGAAGATGGAGCTGCTCGAGCGCCTGGACCGAGAGCGGCGTGCTTGGGAGCAGCAGCAGCAGGAGCTGGCCTGGAGGATAGAGCAGTTGCAGAAAGAGAGCAGTCCCCAGAGAGGCGGCAGTTTCCCCTGTGATCAAAAAGGAGGCAACCTGCGCCCCTCTCCCCACCCCGGAGGAGCTCGCGGGTCGCGGCCTCTGTCTGCGTGGCACTGTGAGGTCACGGACTCTGCACCGCGTGAGGACCAGCCACTGTCCAAGCTGAAGGAGTCGGACAGGTGCTCGGCCAGCGAGAACCTCTACCTGGATGCCCTGTCCCTGGACACTGAGCAGGAGGAGCCGCCCCGACCCCGAGGGCCCAAGAGGACCTTCAGGAGCCACCTCCCCAAGGAAGAAGACAATCACAAGAGAAATCTTCAAAGGGCCATGTCTGTGTCCTCCATGTCCGAGTTCCAGCGCCTAATGGATGTGTCCCCCTTCCTGCCGGAGAGGGGCCTGGCGCCAGCCAGCAGCCGGGACGACGTCACCCCGCCCCTGTCCCCCGATGACCTGAAGTACATCGAGGAGTTCAACAGCGAGAGCTGGGGCTATGAGGTGGCCCCCAGGGCCGGCCTCGAGCGGCCCCCGGACTCCTGGGCAGACAGGACCGAGGGCGGGCGGGTGGGACAGGAGACCCCGGCAGAGCCCTTCCCCTCCTCCTCCTGGTACCTGACCACGAGTGTCACCATGCCCACGGACACCGTGAGCAGCCCCGAGCACTGCCGGAAGCAGGCGCTGCACAGCCACATCATTGCCGAGCCATCGAGGGTGCGTGTGCTGCACAGCCCGCCTGCCATCCGCAGGGTGGACAGCATTGGGCCCGCAGCAGGTGCCGAGGGCAGGGGCCGACTGGACCCTGAGGGCCCCTCACCCTCGGGCAGAGCCAGGGGGAGCCTTGCAGAGGCCAAGGAACCTCCCACACCGGGCAGGTGGCCCTGCACCCCTGCCAGACAGCCCCGAGACCATGTGGAGGGGGCCCTGTGCCCGCTCGACCTCCCTCTCTGTGCCCCACTGGGGCTCGCGTCCCCGCCGCACAGCCTGGACATGGCCAAGAACATGAGCGATGACACGAAGGCAGCGGCCTTCTCTGTCAGGAACGCCCTGTGCTCCGGGCCCCCAAGGCCGCGCGTCAAGGACATGGCCTGCCAGACAAACGGGTCCCGCGTGGCGGGGACGCAGGCCGTGCAGACAGTCAGCGTGGGCCTGCAGACTGAAGCCCTGCGCACCGGCACCATCACCAGCAGCCCCCACCGCTGCCTCACCCCAAAGGCGGGGGGCGGTGCCACTCCCGTGTCATCCCCGTCCCGGAGCCTTAGGAGCAGGCAGGTGGCCCCTGCCATCGAGAAGGTCCAGGCCAAGTTTGAGCGCACCTGCTGCTCCCCCAAGTACGGGTCCCCCAAGCTGCAGAGGAAGCCCCTCCCCAAAGCTGACCAGCCAGGCAGCAGGACCTCGGCAGGGGCCGGCCAGAAGGGGTTCAGCGAGTCGGCCTGGGCCCGCTCCACCACCACGCGGGAAAGCCCAGTGCACACCACCATCAACGACGGCCTCTCTAGCCTGTTCAGCATCATCGACCACAGCCCGGCCATGCAGGACGCCTTCCAGAAGGGTGCTCGGGCCGGGTCCCGGCCAGAGCTGGGCCCTGGCCAGGAAACGGGCCCGGGTTCCCAGGGAAGGTTGCCCAGCCCACTGGGCATGGGCACAGAGACGATGGGCAGGGAGGACAGGGGGGAGGGCACACCTGTGAGGCAGGACCTGTCCGCACCCCCTGGCTACACGCTGGCCGAGAGCGTGGCGCGGATCCTCAACAGGAAGCTGCTGGAGCACGCCTTAAAGGAGGACAGGAGGCAGGCTGCCCACGGCCTGGCGCTCAACAGCGACAGCCTTCCAGGAGAAGCGGCCTCAGCTGAGCCAGGGGCCATAGAGAACCCACCCGTCTTACTAACTGCCCCGTGGGGACTCTAG

Related Sequences

XP_004853279.1 Protein

Soga2 PREDICTED: protein SOGA2 isoform X2 [Heterocephalus glaber]

Length: 1843 aa      View alignments
>XP_004853279.1
METLSGPAGGAPDAKPQPPGARHPLLLRPPAERRRLHREPSPARPATWAPGPAPAALRAPVLAGRPPSSSGPPAQPGSLSRRSTGVPGAKDKPPPGFGTRTASGAKAALGARKAARAVPNEPLPRAAKPPGPVPPGAAAKAHRAKREPGAAPSRALASPSPTARAPNARLAGAPGARAGHTDSSSDLSDCASEPPAAGSDAESGTGSSDREPARGAPPGSPETLALLAAPAAGLGGRSSPGGVPPGSPGRGAVDDGEGRVPPERAVPGTPQESGPGLQPRLGPSLEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELETVEEKRTRAEDENETLRQQVIEVEIARQALQNELERQKESFLKRRGSREMYKEKKTLSQDDSADLKCQLQFAKEEASLMRKKMAKLCREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLRLVEEEANILGRKIVELEVENRGLKAEMEDLQVQHKQEGAGQDRVPRAPTSPFGDSLESCAELRRHLQFVEEEATLLRRSISEIAAHNQQLTHELSKFKFEPCPEPGWRRDSLGKGTMAPLQEELRSARLQISKLSGKVLKLQSENLAMLSSAHLGLQAPSPRDSDANSDTGQKESDVEDGRLPQPKREGPVGGESDSDETVEKTSGFGSRKPSEASEPCLAELRGPKDAEHLVALKRKAQQLERTMEHLITDTDSFLRNSPGLQAEGERALGGQDEPHLLGAINRKMKAFRKELQAFLEQVARLGDSLSALPHHTESSSFLSTVTSMPRDSPVGNLGKELGPDVQSRMRDQQEWRLGPDRGEDHDSAHLHTAQELHRRADGDTGSHCPGGQSCFSPKMEEEHLYALRWKELEMQSLALQSTLHTRTWGEERMLLQQELGVLRQSIFLFYLKLRWLLKHWRQAKQAGGSGEDGAEGEHPETLPRLGELGVQGCLQADGLEHSDGDRGCAFPVGEAAPCAPVQIGDHASRLQTVDGAPLHRQVVEHWQLFSTLKALLEDFRSELWEDELARRRLQQQYASDKAAWDVEWAVLKCRLQQLEEKTEKSLGEPDAVVESKGALKREREAHQKLLADSHGLVLDLRWQMHHREKSWRREKMELLERLDRERRAWEQQQQELAWRIEQLQKESSPQRGGSFPCDQKGGNLRPSPHPGGARGSRPLSAWHCEVTDSAPREDQPLSKLKESDRCSASENLYLDALSLDTEQEEPPRPRGPKRTFRSHLPKEEDNHKRNLQRAMSVSSMSEFQRLMDVSPFLPERGLAPASSRDDVTPPLSPDDLKYIEEFNSESWGYEVAPRAGLERPPDSWADRTEGGRVGQETPAEPFPSSSWYLTTSVTMPTDTVSSPEHCRKQALHSHIIAEPSRVRVLHSPPAIRRVDSIGPAAGAEGRGRLDPEGPSPSGRARGSLAEAKEPPTPGRWPCTPARQPRDHVEGALCPLDLPLCAPLGLASPPHSLDMAKNMSDDTKAAAFSVRNALCSGPPRPRVKDMACQTNGSRVAGTQAVQTVSVGLQTEALRTGTITSSPHRCLTPKAGGGATPVSSPSRSLRSRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPKADQPGSRTSAGAGQKGFSESAWARSTTTRESPVHTTINDGLSSLFSIIDHSPAMQDAFQKGARAGSRPELGPGQETGPGSQGRLPSPLGMGTETMGREDRGEGTPVRQDLSAPPGYTLAESVARILNRKLLEHALKEDRRQAAHGLALNSDSLPGEAASAEPGAIENPPVLLTAPWGL