Details from NCBI annotation

Gene Symbol Colec12
Gene Name collectin sub-family member 12
Entrez Gene ID 101720198

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COLEC12 ENSCPOG00000010983 (Guinea pig)

Gene Details

collectin sub-family member 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009871, Guinea pig)

Protein Percentage 94.43%
CDS Percentage 91.39%
Ka/Ks Ratio 0.08259 (Ka = 0.0276, Ks = 0.3336)

COLEC12 ENSG00000158270 (Human)

Gene Details

collectin sub-family member 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000383115, Human)

Protein Percentage 93.91%
CDS Percentage 90.03%
Ka/Ks Ratio 0.06991 (Ka = 0.0285, Ks = 0.4073)

Colec12 ENSMUSG00000036103 (Mouse)

Gene Details

collectin sub-family member 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043220, Mouse)

Protein Percentage 90.66%
CDS Percentage 85.84%
Ka/Ks Ratio 0.07997 (Ka = 0.0488, Ks = 0.6106)

Colec12 ENSRNOG00000016366 (Rat)

Gene Details

collectin sub-family member 12 (Colec12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059663, Rat)

Protein Percentage 90.66%
CDS Percentage 86.15%
Ka/Ks Ratio 0.08379 (Ka = 0.0493, Ks = 0.5882)

Genome Location

Sequence Coding sequence

Length: 2220 bp    Location: 11013203..10860097   Strand: -
>XM_004853176.1
ATGAAAGACGACTTCGCAGAGGAGGAGGAGGTGCAGTCCTTCGGTTACAAGCGGTTTGGTATTCAGGAAGGAACACAATGTACCAAATGTAAGAATAACTGGGCACTGAAGTTTTCTATCATATTATTATATATTTTGTGTGCCTTGCTAACCATCACAGTAGCCATTTTGGGATACAAAGTTGTAGAGAAAATGGACAATGTGACAGGAGGCATGGAGACATCTCGCCAATCCTATGATGACAAGCTCACAGCAGTGGAAAGTGACCTGAAGAAATTAGGGGACCAAACTGGGAAGAAAGCTATCAGCACCAATTCAGAACTCTCCACATTCAGGTCAGATATTCTGGATCTTCGCCAACAGCTTCGTGAGATTACAGAAAAAACCAGCAAGAACAGAGATACGCTGGAGAAGCTGCAGGCAGGTGGGGATGCGCTGGTGGACAGGCAGAGCCAACTGAAAGAAACTCTAGAGAATAATTCTTTCCTCATCACCACTGTAAACAAAACCCTCCAGGCGTACAATGGCTACGTCACGAATCTGCAGCAAGACACCAGCGTGCTCCAGAGCAATCTGCAGAACCAGATGTACTCCCACAGCGTGGTCATCATGAACCTCAACAACCTGAACCTGACCCAGGTGCAGCAGAGAAACCTCATCACCAACCTGCAGCGATCGGTGGACGACACCAGCCAGGCCATCCAGCGCATCAAGAATGACTTCCAGAACCTGCAGCAGGTTTTCCTTCAAGCCAAAAAGGACACCGACTGGCTGAAGGAGAAAGTGCAGAGCTTGCAGACGCTTGCTGCCAACAATTCCGCCTTGGCCAAGGCCAACAACGACACCCTGGAGGATATGAACGGCCAGCTCAGCTCATTCACAGGTCAGGTGGACAACATCACCACCGTCTCACAGGCCAACGAGCAGAACCTGAAGGACCTTCAGGACTTGCACAAGGATGCAGAGAATAGAACGGCAATCAAGTTCAGCCAACTGGAGGAACGCTTCCAGCTCTTTGAGACGGACATTGTGACCATCATTAGCAACATCAGCTACACAGCTCACCACCTGCGGACGCTGACCAGCAATCTGAACGAAGTCAGGACCACGTGCACAGACACCCTAACCAGGCACACAGACGATCTGACCTCCTTGAATAACACACTGGCCAACATCCGTTTGGATTCTGTGTCTCTCAGGATGCAACAAGATATGATGCGGTCACGGTTAGACACTGAGGTAGCCAACTTGTCAGTGATTATGGAAGAAATGAAGCTCGTGGATTCCAAGCATGGTCAGCTTATCAAGAATTTTACCATCCTGCAAGGTCCTCCTGGCCCCAGGGGTCCAAAAGGCGACAGAGGCTCTCAGGGTCCCCCTGGTCCAACCGGCAACAGAGGACAAAAAGGAGAGAAGGGGGAGCCTGGGCCCCCCGGCCCCGCCGGTGAGAGAGGCCCAGTCGGACCAGCTGGGCCCCCGGGAGAGCGCGGCAGCAAAGGCTCCAGAGGCTCCCAGGGCCCCAAAGGCTCCCGTGGGTCCCCCGGGAAGCCCGGCCCGCAGGGAACCAGTGGAGACCCAGGCGCCCCGGGCCCAGCAGGCAAGGATGGGCTCCCCGGCCCCCAGGGCCCTCCTGGCTTCCAGGGCCTGCAGGGCACTGTGGGGGAGCCTGGGGAACCCGGACCTCGAGGACCGCCAGGCCTGCCAGGGGAGCCAGGACCCAAGGGTGCCCCTGGTCCCCCGGGGCCAGCAGGGGCAGGGGCACTCCTGGCTCTGCAGTATGAGCCAACCCCGGTGCCAGAGGCCAGCGGCTGTCCACCCCACTGGAAGAACTTCACAGACAAATGCTACTATTTTTCGGTGGAAAAAGAAATTTTTGAGGATGCGAAACTTTTCTGTGAAGACAAGTCTGCACATCTTGTTTTCATAAACACAAGAGAGGAGCAGCAATGGATAAAAAAGCAAGTAGTAGGGAGAGAGAGCCACTGGATCGGCCTCACAGACTCAGAGCAAGAAAACGAGTGGAAGTGGCTAGACGGAACCCCTGCAGAATACAAAAATTGGAAAGCTGGACAGCCAGATAACTGGGGTCATGGCCACGGGCCTGGAGAAGACTGTGCTGGGTTGATTTATGCTGGGCAGTGGAACGATTTCCAGTGTGAAGACATCAACAACTTCATTTGCGAAAAAGACAGGGAGACAGGACCATCATTGGCATTATAA

Related Sequences

XP_004853233.1 Protein

Colec12 PREDICTED: collectin-12 [Heterocephalus glaber]

Length: 739 aa      View alignments
>XP_004853233.1
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYKVVEKMDNVTGGMETSRQSYDDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQQLREITEKTSKNRDTLEKLQAGGDALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTNLQQDTSVLQSNLQNQMYSHSVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKNDFQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNGQLSSFTGQVDNITTVSQANEQNLKDLQDLHKDAENRTAIKFSQLEERFQLFETDIVTIISNISYTAHHLRTLTSNLNEVRTTCTDTLTRHTDDLTSLNNTLANIRLDSVSLRMQQDMMRSRLDTEVANLSVIMEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNRGQKGEKGEPGPPGPAGERGPVGPAGPPGERGSKGSRGSQGPKGSRGSPGKPGPQGTSGDPGAPGPAGKDGLPGPQGPPGFQGLQGTVGEPGEPGPRGPPGLPGEPGPKGAPGPPGPAGAGALLALQYEPTPVPEASGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSAHLVFINTREEQQWIKKQVVGRESHWIGLTDSEQENEWKWLDGTPAEYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQCEDINNFICEKDRETGPSLAL