Details from NCBI annotation

Gene Symbol Snrpd1
Gene Name small nuclear ribonucleoprotein D1 polypeptide 16kDa, transcript variant X1
Entrez Gene ID 101717437

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNRPD1 ENSCPOG00000004679 (Guinea pig)

Gene Details

small nuclear ribonucleoprotein D1 polypeptide 16kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004212, Guinea pig)

Protein Percentage 85.47%
CDS Percentage 80.91%
Ka/Ks Ratio 0.09147 (Ka = 0.0877, Ks = 0.9585)

SNRPD1 ENSG00000167088 (Human)

Gene Details

small nuclear ribonucleoprotein D1 polypeptide 16kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000300413, Human)

Protein Percentage 100.0%
CDS Percentage 89.36%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.5231)

Snrpd1 ENSMUSG00000002477 (Mouse)

Gene Details

small nuclear ribonucleoprotein D1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002551, Mouse)

Protein Percentage 100.0%
CDS Percentage 88.8%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.54)

Snrpd1 ENSRNOG00000013714 (Rat)

Gene Details

small nuclear ribonucleoprotein D1 (Snrpd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018646, Rat)

Protein Percentage 100.0%
CDS Percentage 87.11%
Ka/Ks Ratio 0.001 (Ka = 0.0007, Ks = 0.6745)

Genome Location

Sequence Coding sequence

Length: 360 bp    Location: 10147298..10135425   Strand: -
>XM_004853170.1
ATGAAGCTCGTGAGATTTTTGATGAAACTGAGCCATGAAACTGTCACCATTGAATTGAAGAATGGAACACAGGTCCATGGAACAATCACAGGCGTAGATGTCAGCATGAACACACATCTGAAGGCGGTGAAGATGACCCTGAAGAACAGAGAGCCAGTGCAGCTGGAAACCTTGAGCATTCGCGGAAACAACATTCGCTATTTTATCCTGCCAGACAGCTTGCCTCTGGACACGCTACTTGTGGATGTTGAACCTAAGGTGAAATCTAAGAAGAGGGAAGCTGTTGCAGGAAGAGGCCGAGGCCGAGGCCGAGGCCGAGGGCGTGGCCGTGGCAGAGGAAGAGGAGGCCCTAGGCGGTAA

Related Sequences

XP_004853227.1 Protein

Snrpd1 PREDICTED: small nuclear ribonucleoprotein Sm D1 isoform X1 [Heterocephalus glaber]

Length: 119 aa      View alignments
>XP_004853227.1
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR