Sequence details NCBI ID: XM_004853145.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cabyr
Gene Name calcium binding tyrosine-(Y)-phosphorylation regulated, transcript variant X4
Entrez Gene ID 101706764

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CABYR ENSCPOG00000008281 (Guinea pig)

Gene Details

calcium binding tyrosine-(Y)-phosphorylation regulated

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007445, Guinea pig)

Protein Percentage 48.95%
CDS Percentage 61.17%
Ka/Ks Ratio 0.53301 (Ka = 0.4972, Ks = 0.9327)

CABYR ENSG00000154040 (Human)

Gene Details

calcium binding tyrosine-(Y)-phosphorylation regulated

External Links

Gene Match (Ensembl Protein ID: ENSP00000382419, Human)

Protein Percentage 42.22%
CDS Percentage 58.4%
Ka/Ks Ratio 0.58077 (Ka = 0.5774, Ks = 0.9941)

Cabyr ENSMUSG00000024430 (Mouse)

Gene Details

calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000111523, Mouse)

Protein Percentage 64.35%
CDS Percentage 77.55%
Ka/Ks Ratio 0.84434 (Ka = 0.2699, Ks = 0.3196)

Cabyr ENSRNOG00000047436 (Rat)

Gene Details

calcium binding tyrosine-(Y)-phosphorylation regulated (Cabyr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065843, Rat)

Protein Percentage 64.23%
CDS Percentage 77.11%
Ka/Ks Ratio 0.64038 (Ka = 0.254, Ks = 0.3966)

Genome Location

Sequence Coding sequence

Length: 1392 bp    Location: 8079389..8056295   Strand: -
Raw sequence   
>XM_004853145.1
ATGATTTCTTCAAAATCCAGACTTGTCATACCCAATGGCCTCAAGACTCTGCTTGAGGGAGTTAGCAGAGCTATTCTCAAAACCAATCCATCAAACATCACCCAGTTTGCAGCAGTTTATTTTAAAGAACTTGCAGTGTTTAGAGAAGGGAATGCTTCTCTGGATATAAAAGATCTGGTTAAACAATTCCATCAGATTAAAGTACAGAAATGGTCAGAAGGAATGATACTGGAGAAGAAACTAGTACGTATAAAGGAATCCGAAGGAACATCTAAGGTCTTCCAAGAATCTACACAGATGGAAAAATGCACAGACACGGAGGAGGACAATATTGCTGGGCCACAATTCATCAACAAAAGCACCCAGTTTCCGTTAGACCGTGCTGAGCACCGACAGCCTGAGGAGAAGGCTGAAGCAGCTCATGGTCCTTCTTCCAAACCGGCCACCCCCAAGGCCACCAGCCCAGCCCCATCGCCATCTCCAGCACCCGTCTCGGCAGAGTTCGCTTATGTTCCTGCTGACCTGGCTCAGCTTGCCGCTCAGATGCTAGGTAATGTTGCATCTACTCATTCTCATGAATCTGATGTATTAATGGTGGACATGGCGACCAGTATGCCCATTTTTACCGAGGAGGTGCTGAGTGCAGAGGTTGCTGAAGAAGTGGTGGCTGCCCCTCTGGGGTGCCCCAGAGAGGTGCAGGTTGTAAGCCAAGCATCTGTGCAGGTAGATGTGGGTCCTAAAGCTAAAGACTATGAGGCTGAACCATCCACACCTTCCTCAGTCCCCTTGCAGGACGAACACCACCCTCCTGTTTATGATCAAGCTCCTAAGGCCCCTTTGCAGGCTGACACCCCGGTCACATCAGCCCTTCGCATATCATCTATATATAACAATGCGCCTGTCACTGAAGAAGTTGTCTATGTTAAGCGAACCCCTGTTCCTGAAAAGCAGCAGTCACCACCAGGTAGTCCCAAACTTGTAGTATACGAGATGGCCTCAGGCATGTGCAAAAAATCTGTAGAGTCTGTAAAATTTGCAGAGGTGGAGAAGACAAATTACCAGCCCTTAGTCCATGTGGAGGTAGAAGCTATAGTACTGCTGCACTCTGACTCCTGTTTGCAAGGTCAGCCGGAGGCACCTGCAGAACCCCTGCATGCAGAGGACCTTATCGAAACAGGTCCCAAAAAGTCTCTGCACCTTGAAGTGGAGATCATGTCCGCAGACCTTGACAAACCCGGGCAGGAGGAGAAGCCCCAGGAGACAGAGGCCGAAGCGGTGCCCCCAGGGGCGGCTGCAACATCATCTAGTGGCCCCTTCCCTCCTGTGCTAGAAGGTCTTACTGAGCCAGAAATTGAACCAGAAGGGGAAGCAGCACCTGAACAGGTTTGGTGA

Related Sequences

XP_004853202.1 Protein

Cabyr PREDICTED: calcium-binding tyrosine phosphorylation-regulated protein isoform X4 [Heterocephalus glaber]

Length: 463 aa      View alignments
>XP_004853202.1
MISSKSRLVIPNGLKTLLEGVSRAILKTNPSNITQFAAVYFKELAVFREGNASLDIKDLVKQFHQIKVQKWSEGMILEKKLVRIKESEGTSKVFQESTQMEKCTDTEEDNIAGPQFINKSTQFPLDRAEHRQPEEKAEAAHGPSSKPATPKATSPAPSPSPAPVSAEFAYVPADLAQLAAQMLGNVASTHSHESDVLMVDMATSMPIFTEEVLSAEVAEEVVAAPLGCPREVQVVSQASVQVDVGPKAKDYEAEPSTPSSVPLQDEHHPPVYDQAPKAPLQADTPVTSALRISSIYNNAPVTEEVVYVKRTPVPEKQQSPPGSPKLVVYEMASGMCKKSVESVKFAEVEKTNYQPLVHVEVEAIVLLHSDSCLQGQPEAPAEPLHAEDLIETGPKKSLHLEVEIMSADLDKPGQEEKPQETEAEAVPPGAAATSSSGPFPPVLEGLTEPEIEPEGEAAPEQVW