Details from NCBI annotation

Gene Symbol Taf4b
Gene Name TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa
Entrez Gene ID 101702563

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TAF4B ENSCPOG00000001414 (Guinea pig)

Gene Details

TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001278, Guinea pig)

Protein Percentage 83.0%
CDS Percentage 86.83%
Ka/Ks Ratio 0.43708 (Ka = 0.1097, Ks = 0.2509)

TAF4B ENSG00000141384 (Human)

Gene Details

TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000269142, Human)

Protein Percentage 80.44%
CDS Percentage 85.05%
Ka/Ks Ratio 0.35774 (Ka = 0.1162, Ks = 0.3247)

Taf4b ENSMUSG00000054321 (Mouse)

Gene Details

TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000126909, Mouse)

Protein Percentage 74.23%
CDS Percentage 80.65%
Ka/Ks Ratio 0.39894 (Ka = 0.1678, Ks = 0.4206)

Taf4b ENSRNOG00000026023 (Rat)

Gene Details

Protein Taf4b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031359, Rat)

Protein Percentage 71.79%
CDS Percentage 80.1%
Ka/Ks Ratio 0.47666 (Ka = 0.1869, Ks = 0.3922)

Genome Location

Sequence Coding sequence

Length: 2568 bp    Location: 6162924..6031037   Strand: -
>XM_004853137.1
ATGCCGGCGGGCCTCACCGAGCCGGCCGGCGCCGCTCCACCCGCGGTCGGGAGCGCCTCGGGGACCGTGGCCCTGGCCCCCGCCGCGGCGCCGCCAGTCCGCGTGGAGAGCACCCCGCTGGCCCTGGGCGCCGTGACTAAGTCGCCCGGCGCTGTCTGCGTGGAGTCCCCGGCGCCCCAGCCCCTGCGGTCCCCCGTGGGGACCCTGGTAACCAAAGTAGCTCCGGTCTGTGCTCTTCCAAAACTCAGCGGCGGCCCTAGGCTGCCCGCTCCTCAGATCCTCACCGTGAAAGCCCCCGCCACCGCGACAATCCAGCTGCCTGCCAATCTGCAGCTTCCTCCAGGAACAGTTCTGATCAAAAGTAACAGTGGTCAGTTGATGTTGGTATCTCCTCAGCAAGGGGTGACGAGAGCAGACATGGCAAGTACTGTAACTTCCAGGCCAGCAGTACCAGTGAACACGCAAACTGTCAAAATCTGTACGGTGACGAATTCTAGCTCACAGGTAATGAAGAACGTGGCAGTGGCACCTGTTAAAACATTGGCACAAAGAGGAGCTACTGTGGCCCCCGCTGTTCCAAACCCTTCCTCAGTACAGCCTGTGTCTCTGCCGGCCAGTGTGGCTTCGGTTACGGCTGTGAAGCCGGTGAAGCCTTCGGTGTTGGGAGCATCGTCTGCACCCTCAAGTGTGCCCAGTTCTAGAGCAGACAGCTTGGCCGCCCTGCAGACTGACCTCTCGCCGGCAATGGTAGAAAATGTGAAGAAATGTACAAACTTTCTGGCAATGTTAATAAAGCTAGCGTGCCATGGGTCACAGTCTCCAGAGATGGGGAAGAGCGTGAAGGAGCTGGTGGAGCAACTATTGGATGCAAAAATTGAAGTGGAAGAGTTTACTAAGAAACTGTATATCGAACTCAAGTCGTCACCTCAGCCTCACCTAGTTCCTTTCCTTAAGAAAAGTGTGATTGTTTTACGACAACTTCTGCCTGACTCCCAGAGCTTTATTCAGCAGTGTGTTCAGGAGACTTCCAGCGAGTTTGTCGTTGGCACCCGTACCCCAACAGTAACCGCTCCTCCTGTAGTGACAGCTGCAAGTTCCTCAGCCCAAACTGAAAAGCCCATCATCGTTTCTGCAGCAACAGTGCCCACACCTGTGTCTGTGCAAACTCTGAATCCACTTGCTGGGCTGGAGGGAGCAAAAACTGGCCTTGTGACCCTGCATTCAATGGGCCCGGCTGCTGTGCCAGGAAGAACAACAGCTGGAACTATTTTGCTCCAGACCTCAAAGCCACTCTTTACATCGGTACCGAATGCAGTAACAACAGTCTCGCTTCAGCCTGAGAAGCCAGTTGTGTCTGGATCAGCAGTAACACTGGCTCTTCCATCAGTAACTTTTGGAGAAAAGTCGCCTGCAAGTCTTTGTCTTCCGCCTGTGAAAACTGTTGCTGCTTCTGCAGGGACCATGCTGGACAAGCCTGTCATTCGCACTCCGGTCCAAATCAAACTTGGCCAGCCAGGTGCCCTCCTGTCACAGCCAGTTGGGATTCCGTCAGGTGTCAAAGTCAAGCAACTAGTAGTCCAGCAGCCATCAGGAGGCCTTGGAAAACAAGGGACCACAGCTTCTCATCCCTCAGCATTGACCATTCAGAAATCTGCAGAGAAGATTCCAGTGAACACTGTAGTACCTACTAGTAAGTGTCCTCCAGCTTCCATTCTAAAGCAAATTACTTTGCCTGGAAATAAAATTTTGTCGCTTCAAGCATCTACTGCTATTCAGAAAAATAAAATAAAAGAGAACGGAACAACAGGCTTCAGAGATGAAGATGACATCAATGATGTGACTTCCATGGCAGGGGTCAACCTCAGTGAAGAAAATGCCTGCATTGTAGCAACAAACTCTGAATTAGTTGGCACACTCATTCAGTCATGCAAAGATGAGCCGTTTCTTTTTATTGGAGCTCTACAAAAGAGAATCGTAGACATTGGTAAAAAGCATGACATTACGGAGTTTAACTCTGATGCTGTGAACTTGATCTCCCATGCAACACAGGAGAGATTACGAGGCCTTCTAGAAAAACTGACTACAATTGCTCAGCATCGAATGACTACTTACAAGGCAAGTGAAAATTACATCTTGTCTAGTGATACTAAGTCACAGCTCAAATTTTTTGAAAAGCTGGATCAATTGGAGAAACACAGGAAGGATTTAGAAGAAAGAGAAATGTTACTTAAGGCTGCCAAGAGTCGTTCCAATAAAGAAGATCCAGAACAGCTGAGATTAAAGCAGAAAGCCAAAGAGTTGCAGCAGTTGGAGCTCGCCCAGATACAGCACAGAGATGCTAATCTCACAGCTCTTGCAGCTATTGGACCAAGGAAGAAGAGACCGCTGGAACCTGGAAGTGAGGGTTCAAAAGACAGTCTTGCTTGTGGGACATCCAGCCTGACAGCCACCAAACAGTTGCTCCGTCCAAGAATCACGAGAATCTGCCTCAGGGACCTGATATTCTGTATGGAACAGGAAAGGGAGATGAAGTACTCTCGAGCTCTGTACCTTGCCCTTCTGAAGTGA

Related Sequences

XP_004853194.1 Protein

Taf4b PREDICTED: transcription initiation factor TFIID subunit 4B [Heterocephalus glaber]

Length: 855 aa      View alignments
>XP_004853194.1
MPAGLTEPAGAAPPAVGSASGTVALAPAAAPPVRVESTPLALGAVTKSPGAVCVESPAPQPLRSPVGTLVTKVAPVCALPKLSGGPRLPAPQILTVKAPATATIQLPANLQLPPGTVLIKSNSGQLMLVSPQQGVTRADMASTVTSRPAVPVNTQTVKICTVTNSSSQVMKNVAVAPVKTLAQRGATVAPAVPNPSSVQPVSLPASVASVTAVKPVKPSVLGASSAPSSVPSSRADSLAALQTDLSPAMVENVKKCTNFLAMLIKLACHGSQSPEMGKSVKELVEQLLDAKIEVEEFTKKLYIELKSSPQPHLVPFLKKSVIVLRQLLPDSQSFIQQCVQETSSEFVVGTRTPTVTAPPVVTAASSSAQTEKPIIVSAATVPTPVSVQTLNPLAGLEGAKTGLVTLHSMGPAAVPGRTTAGTILLQTSKPLFTSVPNAVTTVSLQPEKPVVSGSAVTLALPSVTFGEKSPASLCLPPVKTVAASAGTMLDKPVIRTPVQIKLGQPGALLSQPVGIPSGVKVKQLVVQQPSGGLGKQGTTASHPSALTIQKSAEKIPVNTVVPTSKCPPASILKQITLPGNKILSLQASTAIQKNKIKENGTTGFRDEDDINDVTSMAGVNLSEENACIVATNSELVGTLIQSCKDEPFLFIGALQKRIVDIGKKHDITEFNSDAVNLISHATQERLRGLLEKLTTIAQHRMTTYKASENYILSSDTKSQLKFFEKLDQLEKHRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQIQHRDANLTALAAIGPRKKRPLEPGSEGSKDSLACGTSSLTATKQLLRPRITRICLRDLIFCMEQEREMKYSRALYLALLK