Sequence details NCBI ID: XM_004853128.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Dsc2
Gene Name desmocollin 2, transcript variant X1
Entrez Gene ID 101698754

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DSC2 ENSCPOG00000005506 (Guinea pig)

Gene Details

desmocollin 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004959, Guinea pig)

Protein Percentage 85.14%
CDS Percentage 87.58%
Ka/Ks Ratio 0.25539 (Ka = 0.0827, Ks = 0.3238)

DSC2 ENSG00000134755 (Human)

Gene Details

desmocollin 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000280904, Human)

Protein Percentage 79.76%
CDS Percentage 83.28%
Ka/Ks Ratio 0.24003 (Ka = 0.116, Ks = 0.4833)

Dsc2 ENSMUSG00000024331 (Mouse)

Gene Details

desmocollin 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042905, Mouse)

Protein Percentage 76.45%
CDS Percentage 77.67%
Ka/Ks Ratio 0.1832 (Ka = 0.1475, Ks = 0.8053)

Dsc2 ENSRNOG00000039969 (Rat)

Gene Details

desmocollin 2 (Dsc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000058135, Rat)

Protein Percentage 76.29%
CDS Percentage 76.29%
Ka/Ks Ratio 0.15424 (Ka = 0.1502, Ks = 0.9736)

Genome Location

Sequence Coding sequence

Length: 2700 bp    Location: 1748559..1778566   Strand: +
Raw sequence   
>XM_004853128.1
ATGGCGGCGCCCAGACCCGCGCGCTCCTGGAGCGGAGGCCTCTGCCGGCAGCTCCTGCTGACCCTCTCGATCTTAACATTTGCCTGTGATGCCTGCAAACCAGTGATACTGTATGTTCCTTCCAAACTGGATGCTGAGAAATTCATTGGTAGAGTTAACCTGGAGGAGTGCTTTAAATCTGCAACTCTAATTCATTCAAGTGACCCCGATTTCCAGGTTTTAGAAGATGGATCAGTCTATACAACAAATGCTGTTCTTTTGGCCTCCGAGAAGAGAGAGTTTATCATATCACTTTTTGACACAGAAAGCCAAGAAGAGAAGACAATCTCTGTCTTTTTAGAGGATCAAACAAAGGTACAAAAGGAAAAGCATTCTACAGAAAAACTTCTAAGACGTTCCAAAAGAAGATGGGCTCCTATTCCCTGTTCAATGCTAGAGAATTCTTTGGGTCCGTTCCCACTTTTCCTTCAACAGATCCAATCTGACACAGCCCAAAACTACACTATATACTATTCCATCAGTGGACCTGGAGTGGACCAAGAACCTCGAAATTTATTTTATGTGGAGAGAGATACTGGGAACCTGTATTGTACAGGTCCAGTAGATCGTGAGCAGTATGAGTCTTTTCAGCTGGTTGCCTTTGCAACAACTTCAGATGGGTACACACCAGAACTTCCATTGCCACTAATAATCAAAATAGAGGATGAAAATGATAACTACCCGATTTTTACTGAAACAACATACATTTTTACAGTTCTTGAAAATGGCAGAGTTGGCACTACAGTGGGACAGGTTTGTGCAACGGACAAGGATGAGCCCGATACCATGCACACGCGCCTGAGGTACTCAATCCTTGAGCAGCTACCATCGCGACCCACTCTCTTTACTATGCATCCAGGCACGGGTGTGATCACCACAACATCATCTCAGCTGGACAGAGAGGTAATTGATAAATACCAGTTGAAAGTAAAAGTACAAGACATGGATGGTCAACATTTTGGTTTGCAGACAACTGCAACTTGTATCATAAATATTGGGGATGTGAATGACAACTTGCCAACATTTACCCACTCTTCTTATGTGACATCAGTGGAAGAAAATACAGCTGATGTGGAAATCTTACGTGTTACTGTTGAGGATAAAGATTTAGCTAATACTGCTAATTGGAGAGCTAATTACACCATTTTAAAGGGCAATGAAAACGGAAATTTTAAAATTGTAACAGATCCCAAAACCAATGAAGGAATTCTGTGTATAGTCAAGCCACTAGATTATGAAGAAAGACAACAGATGACCCTGGAAATTGGTGTAACTAATGAAGCTCCATATACCAGAGAGGCTACTTCCAAATCAGCCATTAGCACAGCGACAGTCACAGTTACTGTCAAAAATCAGGACGAGGGCCCTGAGTGCCAACCTTCGGCACAAACTGTTCGGATTAAAGAAAGTGAGCCAGTGGGGACCCGGAGCAATGGCTACAAAGCGTATGACCCAGAAACAGGAAGTAACAGTGGCATAAGGTACAGAAAGTTAAGTGATCCGAAAGGGTGGGTCACCCTTGATGAAGATTCAGGATCAATCACAATTTTCCGAAATTTGGATAGAGAGGCAGAGTCCATCAACAATGGTGTATATAATATTACAGTCCTTGCATCAGATAAAGATGGAAGAAGTTGTACTGGAACCCTGGGAATTGTAATGGAGGACGTGAATGATAACGGCCCATTCATACCTAAGACTACAGTGACCATCTGTAAACCCACCATGTTCTCCACGGAGATTGTCGCTGTTGATCCTGATGAACCCATAAATGGCCCACCATTTGCCTTTAGTTTGGAAAGTTCTGATTCAGAAGTACGGAGAATGTGGAGACTGAAAAAAATTAATGACACAGCAACATGGCTTTCTTATCAGAATGACCCTCCGTTTGGATCATATGTTGTGCCCATCCGAGTTACAGACAGACTCGGCCTGTCTACCATCAACTCATTGACTGTTAGGCTGTGTGATTGTGTTACCGAGGCAGAGTGTGATATTCGCTCAATTGAGAGAGCTGGCGAAGTAAGACTTGGAACATGGGCCATCCTCGCAATATTGTTGGGCATAGCGCTGCTATTTTGTATCCTGTTTACATTGGTGTGTGCGGCTTCTAGGGCAACCAGAGAGGTAAAAACACTTCCTGATGATTTAGCCCAACAGAACCTGATTGTATCTAACACTGAAGCTCCCGGAGATGACAAAGTGTATTCCACAAATGCCTTCACGACCCATACCGTGGGCACTTCTGGTCAGGGCGTCTGTGGCACCTTGGGATCTGGGGTCAGAAACGGTGGGCAAGAGACCATAGAACTGGTGAAAGGAGGACAGCAGACCTTGGACTCCTGGCGGGGTGCTGGGTACCACCACACCCTGGACCCCTGCAGGGGAGGACACGTGGAGATGGACAACTGTCGCTACACCTACTCCGAGTGGCACAATTTCACCCAGCCCCGACTCGGTGAAAAGGTGCATCTGTGTGATCAGGATGACAACCACAAGCACGCTGAAGACTACGTCCTTTTGTATAACTATGAGGGCAAAGGATCAGTGGCTGGTTCCGTGGGGTGTTGTAGTGATCGACAGGAAGAAGATGGGCTTGAGTTTTTGGATCATTTGGAGCCCAAATTTAGGACCCTAGCTGAAGCATGCATGAAGAGATGA

Related Sequences

XP_004853185.1 Protein

Dsc2 PREDICTED: desmocollin-2 isoform X1 [Heterocephalus glaber]

Length: 899 aa      View alignments
>XP_004853185.1
MAAPRPARSWSGGLCRQLLLTLSILTFACDACKPVILYVPSKLDAEKFIGRVNLEECFKSATLIHSSDPDFQVLEDGSVYTTNAVLLASEKREFIISLFDTESQEEKTISVFLEDQTKVQKEKHSTEKLLRRSKRRWAPIPCSMLENSLGPFPLFLQQIQSDTAQNYTIYYSISGPGVDQEPRNLFYVERDTGNLYCTGPVDREQYESFQLVAFATTSDGYTPELPLPLIIKIEDENDNYPIFTETTYIFTVLENGRVGTTVGQVCATDKDEPDTMHTRLRYSILEQLPSRPTLFTMHPGTGVITTTSSQLDREVIDKYQLKVKVQDMDGQHFGLQTTATCIINIGDVNDNLPTFTHSSYVTSVEENTADVEILRVTVEDKDLANTANWRANYTILKGNENGNFKIVTDPKTNEGILCIVKPLDYEERQQMTLEIGVTNEAPYTREATSKSAISTATVTVTVKNQDEGPECQPSAQTVRIKESEPVGTRSNGYKAYDPETGSNSGIRYRKLSDPKGWVTLDEDSGSITIFRNLDREAESINNGVYNITVLASDKDGRSCTGTLGIVMEDVNDNGPFIPKTTVTICKPTMFSTEIVAVDPDEPINGPPFAFSLESSDSEVRRMWRLKKINDTATWLSYQNDPPFGSYVVPIRVTDRLGLSTINSLTVRLCDCVTEAECDIRSIERAGEVRLGTWAILAILLGIALLFCILFTLVCAASRATREVKTLPDDLAQQNLIVSNTEAPGDDKVYSTNAFTTHTVGTSGQGVCGTLGSGVRNGGQETIELVKGGQQTLDSWRGAGYHHTLDPCRGGHVEMDNCRYTYSEWHNFTQPRLGEKVHLCDQDDNHKHAEDYVLLYNYEGKGSVAGSVGCCSDRQEEDGLEFLDHLEPKFRTLAEACMKR