Sequence details NCBI ID: XM_004853106.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Garem
Gene Name GRB2 associated, regulator of MAPK1, transcript variant X3
Entrez Gene ID 101721141

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GAREM ENSCPOG00000024685 (Guinea pig)

Gene Details

GRB2 associated, regulator of MAPK1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017419, Guinea pig)

Protein Percentage 94.25%
CDS Percentage 91.82%
Ka/Ks Ratio 0.1022 (Ka = 0.0291, Ks = 0.2851)

GAREM ENSG00000141441 (Human)

Gene Details

GRB2 associated, regulator of MAPK1

External Links

Gene Match (Ensembl Protein ID: ENSP00000269209, Human)

Protein Percentage 92.27%
CDS Percentage 89.38%
Ka/Ks Ratio 0.11425 (Ka = 0.0422, Ks = 0.369)

Garem ENSMUSG00000042680 (Mouse)

Gene Details

GRB2 associated, regulator of MAPK1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048914, Mouse)

Protein Percentage 91.07%
CDS Percentage 87.22%
Ka/Ks Ratio 0.10439 (Ka = 0.0512, Ks = 0.4901)

Garem ENSRNOG00000048511 (Rat)

Gene Details

Protein LOC679154

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067464, Rat)

Protein Percentage 95.4%
CDS Percentage 88.74%
Ka/Ks Ratio 0.03878 (Ka = 0.0229, Ks = 0.5899)

Genome Location

Sequence Coding sequence

Length: 2526 bp    Location: 549745..723592   Strand: +
Raw sequence   
>XM_004853106.1
ATGACAGTCATTCTGGAAGGAGAATGCATAGAAGGACTGCGGGAGAATGATTACCTTCTGATTCATTCATGTCGTCAGTGGACCACCATCACTGCCCATAGTCTGGAAGAGGGCCACTATGTCATTGGGCCAAAGATAGAGATCCCTGTTCATTATGCAGGGCAGTTCAAGCTGCTGGAACAAGACCGCGATATAAAGGAGCCTGTGCAATATTTCAACAGTGTAGAGGAGGTGGCAAAGGCATTTCCTGAGCGCGTGTACGTCATGGAGGAAATAACATTCAACGTGAAGGTTGCTTCTGGTGAATGCAATGAAGACACGGAGGTTTACAACATAACCCTGTGCACCGGGGATGAGCTCACCCTAATGGGACAGGCGGAAATCCTATATGCAAAGACTTTCAAGGAAAAGTCCCGGCTCAACACAATCTTCAAAAAGATTGGGAAACTCAATTCGATCAGCAAGCTGGGAAAAGGCAAAATGCCATGCCTCATTTGCATGAATCACCGGACCAACGAAAGCATCAGCCTTCCATTCCAGTGCAAGGGCAGATTTAGTACGCGGAGTCCCCTGGAGCTCCAGATGCAGGAGGGTGAGCACACCATCCGCAATATCGTGGAGAAAACCAGGCTGCCTGTGAACGTGACTGTGCCCAGCCCTCCACCCAGAAACCCGTACGACCTCCACTTTATCCGAGAGGGCCACCGCTACAAGTTTGTGAACATCCAGACCAAGACAGTGGTGGTTTGCTGTGTGCTGCGGAACAACAAGATCCTCCCCATGCACTTCCCTTTGCACTTGACTGTCCCCAAGTTCAGCCTCCCGGAACACCTGGTCAAGGGAGAGGTGTGGCCTGAAACCCTGGTCCATCACTGGCTGGGTATCTGCCAAGAACAGTTTGACATTGACGAGTATTCCCGGGCTGTCCGCGATGTGAAAACGGACTGGAATGAGGACTGCAAAAGCCCCAAAAAGAGCCGGTGCTCTGGCCACAACCACATGCCCAATTCCCTGAGCTACGCCCGCGATGAGCTCACCCAGTCCTTCCACCGGCTCTCCGTCTGTGTATATGGCAACAATCTCCATGGTAACAGCGAGGTGAACCTCCACGGCTGCAGGGACCTGGGAGGAGAGTGGGCTCCCTTTCCTCATGACATCCTGCCCTATCAGGACTCTGGTGACAGTGGGAGCGACTACCTTTTCCCGGAAGCTGGTGAAGAGTCAGCGGGCGTCCCAGGGAAGTCCGAACTTCCTTATGAGGAACTGTGGCTGGAGGAAGGCAAGCCCAGCTGCCAGCCTCTCACCCACTCACTGAGCGAGAAGAGCAGATGTGACCCCTTGAGAGGCTCTGTCCGCTCCAAATGTGCAACTTCGCCTCTTCCTGTCCCTGGGACTCCGGGAGCCACAATGAAGTCTTCAGAAATTGCCCTACCTCCGCCTCCAGTGCCTCCCAAATCTGAAGCTGTCAGGGAAGAATGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACAAGTCCCTCCATCCCTCCTCGCACAGTCAAGCCAGCGCGGCCACAGACTCGCTCTCCCAGCCCCACCTTGTCCTACTATTCTTCAGGGCTGCACAACATCAGCGTTACTAAAAGTGACACAAGCCCTTCTGAAAGTGCTCCGGTTTCCTGCTATCCGTGCAACCGAGTGAAAGCCGACTCTGTGGACCTGAAGTCCCCATGCGGAAGTCCTTCCGCGGAAGCTCTGTCCTCCCGGCTCTCGTGGCCTAACCATTATTCGGGAGCATCGGAGACCCAGACCAGGAGTGACTTCCTGCTGGATCCAAGCAGGAGTTACAGTTACCCCAGACAAAAGACACCCGGCACACCAAAGAGAAACTGCCCGGCACCTTTCGATTTTGATGGCTCAGAGCTCCTGAGCGGTGCCCTCACCACAGTCACTGCAGAATCTAGTGGCGGCGCCTCAGGTTGCCCCAAGTCAGCCAGCTACTCGCTGGGGAGCACAGAGAGCGCCCCTGCGGCAAGCGTGACCAAGCAGAGTGTCTCTTGCCCTGCCTTACCGCCCAGGGCCCCAAAGCCAGTGGAACAGGAAGCGGCCGCAGAAACGTCTCCTTTGCCTCTGAGAATTGATGGTGCTGAGGAGGACCCCAAGGCACGGTCACCAGACCTCTCCGAGGACCAGTATTTTGGTAAGAAGGGCGTGCAGGACATCTTCTCTGTCTCTTACCCTTTCTCCTCTCCGCTCCACCTCCAGCTAGTCCCCAGGTCTTGTGGCGATGGTTCCCCATGGCAGCCACCTGCGGACCTGTCAGGACTCTCTATAGAAGAAGTGTCCAAGTCACTACGGTTCATTGGTTTGTCCGAAGATGTCATATCCTTCTTCGTCACTGAAAAGATTGATGGGAATTTGCTTGTTCAACTAACAGAAGAAATCCTCTCAGAGGATTTCAAATTAAGCAAACTTCAAGTGAAGAAAATAAGGCAATTCATTAATGGCTGGAGGCCCAAAATATAG

Related Sequences

XP_004853163.1 Protein

Garem PREDICTED: GRB2-associated and regulator of MAPK protein isoform X3 [Heterocephalus glaber]

Length: 841 aa      View alignments
>XP_004853163.1
MTVILEGECIEGLRENDYLLIHSCRQWTTITAHSLEEGHYVIGPKIEIPVHYAGQFKLLEQDRDIKEPVQYFNSVEEVAKAFPERVYVMEEITFNVKVASGECNEDTEVYNITLCTGDELTLMGQAEILYAKTFKEKSRLNTIFKKIGKLNSISKLGKGKMPCLICMNHRTNESISLPFQCKGRFSTRSPLELQMQEGEHTIRNIVEKTRLPVNVTVPSPPPRNPYDLHFIREGHRYKFVNIQTKTVVVCCVLRNNKILPMHFPLHLTVPKFSLPEHLVKGEVWPETLVHHWLGICQEQFDIDEYSRAVRDVKTDWNEDCKSPKKSRCSGHNHMPNSLSYARDELTQSFHRLSVCVYGNNLHGNSEVNLHGCRDLGGEWAPFPHDILPYQDSGDSGSDYLFPEAGEESAGVPGKSELPYEELWLEEGKPSCQPLTHSLSEKSRCDPLRGSVRSKCATSPLPVPGTPGATMKSSEIALPPPPVPPKSEAVREECRLLNAPPVPPRSAKPLSTSPSIPPRTVKPARPQTRSPSPTLSYYSSGLHNISVTKSDTSPSESAPVSCYPCNRVKADSVDLKSPCGSPSAEALSSRLSWPNHYSGASETQTRSDFLLDPSRSYSYPRQKTPGTPKRNCPAPFDFDGSELLSGALTTVTAESSGGASGCPKSASYSLGSTESAPAASVTKQSVSCPALPPRAPKPVEQEAAAETSPLPLRIDGAEEDPKARSPDLSEDQYFGKKGVQDIFSVSYPFSSPLHLQLVPRSCGDGSPWQPPADLSGLSIEEVSKSLRFIGLSEDVISFFVTEKIDGNLLVQLTEEILSEDFKLSKLQVKKIRQFINGWRPKI