Details from NCBI annotation

Gene Symbol Pcm1
Gene Name pericentriolar material 1, transcript variant X7
Entrez Gene ID 101725686

Database interlinks

Part of NW_004624769.1 (Scaffold)

For more information consult the page for NW_004624769.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCM1 ENSCPOG00000007848 (Guinea pig)

Gene Details

pericentriolar material 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007065, Guinea pig)

Protein Percentage 92.89%
CDS Percentage 94.17%
Ka/Ks Ratio 0.19498 (Ka = 0.0342, Ks = 0.1753)

PCM1 ENSG00000078674 (Human)

Gene Details

pericentriolar material 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000327077, Human)

Protein Percentage 90.7%
CDS Percentage 91.77%
Ka/Ks Ratio 0.15341 (Ka = 0.0443, Ks = 0.2889)

Pcm1 ENSMUSG00000031592 (Mouse)

Gene Details

pericentriolar material 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039709, Mouse)

Protein Percentage 88.82%
CDS Percentage 88.92%
Ka/Ks Ratio 0.1258 (Ka = 0.0557, Ks = 0.4427)

Pcm1 ENSRNOG00000010155 (Rat)

Gene Details

pericentriolar material 1 (Pcm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014202, Rat)

Protein Percentage 88.43%
CDS Percentage 88.03%
Ka/Ks Ratio 0.12176 (Ka = 0.0596, Ks = 0.4894)

Genome Location

Sequence Coding sequence

Length: 6168 bp    Location: 21262792..21155118   Strand: -
>XM_004853075.1
ATGGCTACAGGAGGTGGACCTTTTGAAGAAGGCATGAATGATCAGGGTTTACCAAACTGGAGCAGTGATACTGTTGATGACCGACTCAACAATATGGATTGGGGTGGCCAACAGAAGAAGGCAAATAGATCATCAGAAAAGAATAAGAAAAAGTTTGGTGTAGAAAGTGATAAAAGAGTAACTAATGATATTTCTCCGGAATCATCACCAGGAGTTGGAAGGCGAAGAACAAAGACTCCACATACATTTCCACATAGTAGATATATGACTCAGATGTCTGTCCCAGAGCAGGCAGAATTAGAGAAACTTAAACAGCGGATAAACTTCAGTGATTTAGATCAGAGAAGCATTGGAAGTGATTCTCAAGGAAGAGCAACAGCTGCTAACAACAAACGTCAGCCTAGTGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCAGATTAATACTAACAAGAGCAAAGATGCTGTTACAAGTCTTCAAAAGAGAGAAATGATTGGGTCAGCACAATGTAAAGAGTTGTTTGCTTCTGCATTAAGTAATGACCTGTTGCAAAATTACCAAGTCTCTGAAGAAGATGGGAGAGGAGAGCCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAAATTCGTGACTATATTACTAAAGCCAGTTCCATGCGAGAAGATCTTGTAGAGAAAAATGAAAGATCTGCTAATGTTGAGCATCTTACTCATCTAATAGATCACCTTAAAGAACAAGAAAAATCATACATGAAATTTCTCCAAAAAATCCTTGGCAGAGATCCTGAACAGGAGCCTATGGAAGAGATAGAAAATTTGAAGAAACAACATGATTTGTTAAAAAGGATGTTACAACAACAGGAGCAACTTCGAGCTCTGCAGGGGCGACAGGCTGCTCTTCTAGCTCTGCAGCATAAAGCAGAGCAAGCTGTTGCTGTAATGGATGATTCTGTTGTTGCAGAAACTACAGGTAGTTTATCAGGAGTCAGTATCACATCTGAACTAAATGAAGAATTGAATGATTTAATTCAGCGTTTTCATAATCAACTTCGTGATTCTCAGCCTCCAGCAGTTCCTGACAACAGAAGACAGGCAGAAAGTCTTTCATTAACTAGGGAGGTTTTCCAGAGCAGGAATCCATCAGTTTCCGAACATTTACCTGATGAGAAAGTCCAACTTTTTAGCAAAATGAGAGTGCTACAGGAAAAGAAACAAAAAATGGACAAATTGCTTGGAGAACTTCACACACTTCGAGATCAGCATCTGAATAACTCATCATTTGTGCCTTCTTCAGCTTCTCCACAGAAGAGTACAGATCAGAGAAGTACAAGTTCAGCCCCTTCTGCTTCTGTAGGCTTGGCGCCAGTTGTCAATGGAGAGTCCAATAATGGCCTTACGTCATCTGTTCCTTATCCTGCCACTTCTCTGGTTTCTCAGAATGAGAGTGAACGTGAAGGGCATCTAAATCCAACTGAAAAACTCCAGAAGCTAAATGAAGTTCGAAAGAGATTGAATGAATTAAGAGAATTAGTTCATTATTATGAGCAAACATCAGATATGATGGCAGATGCTGTAAATGAAAACACAAAAGATGAAACTGAAGAGTCAGAATATGATTCTGAGCGTGAAAATTCTGAACCTGTTGTTAACATTCGAAATCCACAAGTATCTGCCACATGGAATGAAGTAAATAGTAATAGTAATCCACAGTGTGTTTCTAATAATAGAGATGGGAGATCAGCCAATTCTAATTGTGAAATAAACAACAGATCTGCTGCCAACCTTAGGGCTCTAAACATGCCGCCTTCTTTAGCAGATTGTCGATACAATAGAGAAGGAGATGAAGGGATCCATGTAGCACAAGGGGAAAATGATGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGAAGAGGAGGTAGTCAGTGGAGCTTCGTTATCTAGTCATAGGAGCAGTCTGGTTGATGAGGCTCCAGAAGATGCAGAATTTGAACAGAAGGTCTACAGACTTATGGCTGCAAAACAGAAACTTCGACAGTTACAAGATCTTGTTGCTATGGTGCAGGATGATGATGCAGCTGAAGGAGTTATCTCTGCCAGTACACCGAATTTGGGTGATGTCTACCCACCAGAAGTGGAAATCAAACAAAATTCAAATAAAGCTAGAGGAAATAGCAATAAAACACAGAAAGATACTAGAGTAAATGAAAAGGCAAGAGAGAAATTTTATGAGGCTAAATTACAGCAGCAACAAAGAGAGCTAAAACAATTGCAAGAAGAAAGAAAGAAACTGATTGAGATTCAGGAGAAAATTCAAGCATTGCAAAAGGCATGTCCTGATCTGCAGCTGTCAGCTGCTAGTGTAAGTAATTGTCCTACAAAAAAATATATACCAGCTGTTATTTCAACCCCAACTGTTAATGAAAATGAGACTAGTACAAGCAAATCTGTTGTTGATCCTGATGATTCTTCAGTAGTAGATAATGAGTTGTGGTCAGACATGCGAAGACATGAAATGTTGAGGGAAGAGCTGCGACAGAGAAGAAAGCAGCTTGAGGCTCTGATGGCTGAACATCAGAGGAGGCAAGGTCTAGCTGAAACTACATCTCCAGTGGCTGTGTCATTAAGAAGTGATGGATCTGAGAACGTGTGTACTCCTCAACAAAGTAGAACAGAAAAAACCATGGCAACTTGGGGAGGTTCTACTCAATGTGCACTCGATGAAGAAGGAGATGAAGATGGTTACCTTTCTGAAGGAATTGTTCGGACAGATGAAGAAGAAGAAGAGCAGTATGCCAGTTCCAGTGACAACTTTTCTGTATATCCTCCTAACAGTGTGAATCATAACTCCCATAATGTAAAGGAAACAAAAAATAGGTGGAAGAACAATCGCCCTTTTTCAGCTGATGGAAATTATCGTCCTTTAGCCAAGACAAGACAACAGAATATCAGTATGCAACGGCAAGAAAACCTTCGATGGGTGTCAGAGCTCTCTTATGTAGAAGAGAAAGAACAGTGGCAAGAACAAATTAATCAGCTAAAGAAACAACTTGATTTTAGTGTTAACATTTGTCAGACTTTGATGCAAGACCAACAGACTCTGTCTTGCTTGCTACAAACTCTTCTCACTGGTCCCTACAGTGTTATGCCAAGCAATGTTGCATCTCCTCAAGTACACCTCATAATGCACCAGTTGAACCAGTGCTATACACAGCTAACGTGGCAACAGAATAATGTTCAGAGGTTGAAACAAATGCTAAATGAACTCATGCACCAACAAAATCATAATCCAGAAAAACCTGGAAGCAAGGAAAGAGGCAGTAACACATCACACCCTCCTTCTCCCAGTTTATTTTGTCCTTTCAGCTTTCCACCACAGCCTGTAAATCTGTTTAATGTACCTGGATTTACTAACTTTGCATCATTTGCACCAGGTATGAATTTCAGCCCTTTATTTCCTTCTCCTTTTGGAGATTTTTCTCAGAATATTTCTTCATCCACTGAACAGCAGCAGCCATTAGCCCAGAACCCTTCAGGGAAAACAGAATATATGGCTTTTCCAAAACCTTTTGAAAGCAGTTCCTCTATCGGAGCAGAAAAGCAAAGGAATCCGAAACAGCCGGAAGAGGAAGTAGAAAACAGTAGGACACCGTGGATATATGACCAAGAAGGAGAAATAGAAAAACCATTTATCAAGACTGGATTTACACTGTCAGTAGAGAAAACTACAAATAGTAATCACAAAAATCAATTAGATACAAGTAGGAGAAGACGCCAGTTTGATGAAGAATCAATAGAAAGCTTTAGCAGTATCCCTGATCCAGTGGATCCAACAACAGTAACTAAAATATTCAAGACAAGAAAAGCATCTGCACAAGCCAGCCTGGCATCTAAAGACAAAACTCCCAAATCAAAGAGTAAGAAGAGAAATTCTTCTCATCTGAAAAACAGAGTTAAAAATGTTGGGTATGAAAGTGCCAGTATGTCTAGTGCATGTGAACCTTGCCAAAGTAGGAACAGACATTCAGCCCAGACTGAAGAGCCTGTTCAAGCAAAAGTATTCAGCAGAAAGAATCATGAGCAGCTGGAAAAAATAATAAAATATAGTAGGTCTGCAGAAATATCTTCAGCACATGCTAGGAGAATACTACACCAGTCTAACAGAAATGCATGTAATGAAGCACCAGAAACTGGGAGTGATTTTTCCATGTTTGAAGCTCTGCGGGATACTATCTATTCGGAAGTAGCTACATTAATTTCTCAGAATGAATCTCGCCCACATTTCCTTATTGAACTCTTTCATGAGCTTCAGCTACTTAATACTGACTATTTGAGACAGAGAGCTTTATATGCATTGCAGGACATAGTATCCAGACATATTTCTGAAAGCCATGAAAAAGAAGGGGAAAATGTAAAGTCAGTCAACTCTGGTACTTGGATAGCATCAAACTCGGAACTTACACCCAGTGAAAGCCTGGCTACTACTGATGATGAAACTTTTGAGAACTTTGAAAGAGAAACGCATAAAATAAGTGAGCAAAATGATGCTGATAATGCTAGTGTCATATCTGTATCTTCAAATTTTGAGCCTTTTGCAACAGATGATCTAGGTAACACCGTGATTCACTTAGATCAAGCATTAGCAAGAATGAGAGAATATGAGCGTATGAAGACTGAAGCTGAAAGTAATTCAAATGTGAGATGCACCTGCAGGGTTGTTGAGGATGAAGGAACTGCTGCTGCTACCACTATAGTTAATAATTTAGAAGAAACTCCCATTATTGAAAATCATGGTTCACAACAACCTGTAAGTGAAGTTTCTACTGTTCCATGTCCTAGAATTGATACTCAGCAGCTGGACCGGCAAATTAAAGCAATTATGAAAGAAGTCATTCCTTTCTTAAAGGAACACATGGATGATGTATGCTCTTCTCAACTTCTCACTTCAGTAAGACGCATGGTTTTAACTCTTACCCAGCAAAATGATGAGAGTAAGGAGTTTGTAAAGTTCTTTCATAAACAACTTGGAAGTATATTACAGGATTCACTGACAAAATTTGCGGGCAGAAAACTGAAAGACTGTGGAGAAGATCTTCTTGTAGAGATATCTGAAGTGTTGTTTAATGAATTGGCTTTCTTTAAGCTCATGCAAGATTTGGATAATAATAGTATAACTGTTAAACAGAGATGCAAAAGGAAAATAGAAGCAGCTGGAGTAATACAATCTTATGCCAAAGAGGCCAAAAGGATTCTTGAAGGAGATCACAGCTCACCTGCTAGAGAGATTGATGATGAAGACAAAGACAAAGATGAAACTGAAACAGTTAAACAGACTCAGACATCTGAGGTATATGGTGCCGAAGGTCCCAAAAATGTAAGATCTGATGTTTCTGATCAAGAGGAAGATGAAGAAAGTGATGGATGCCCAGTGTCAATTAATTTGTCTAAAGCGGAAACTCAGGCTTTAACTAATTATGGAAGTGGAGAAGATGAGAATGAGGATGAAGAAATAGAAGAATTTGAAGAGAGCCCTGTAGATGTCCAGACTTCACTTCAAGCTAACACTGAAACTATAGAAGAAAATGAACATGATGATCAGGTTCTACAACATGAACTTGAAAAAACAGCAGAAAGCACGAAGATCCCATCAGAACAAGAACACATTAGTAAAGATGACCAAGATAGCTCTCCTATGAAGCCCTGTTATCTCAATATCTTGGAAAATGAGCAACCTTTAAATAGTGCTGCCCACAAGGACTCACTTACTACTGTTGATTCATCTCAGCAGCCTAACCCTCTGCCGTTACCTTTAACTGAAATTGAAACCTTAGTGCCTAGAGTCAAAGAAGTTAAATCTGCTCAGGAAACTCCTGAAAGCTCACTAGCTGGAAGTCCCGATACTGAATCTCCAGTGTTAGTGAATGACTATGAAGCAGAATCTGGTAACATAAGTCAAAAGTCTGATGAAGAAGACTTTGTGAAAGTTGAAGATTTACCACTTAAACTGACGATATATTCAGAGGCAGATCTTAGGAGGAAAATGGTAGAAGAAGAACAGAAAAACCATTTATCTGGTGAAATATGTGAAATGCAGACTGAAGAATTAGCTGGAAATTCTCAGACACTAAAAGAACCTGAAACAGTGGGAGCCCAGAGTCTATGA

Related Sequences

XP_004853132.1 Protein

Pcm1 PREDICTED: pericentriolar material 1 protein-like isoform X7 [Heterocephalus glaber]

Length: 2055 aa      View alignments
>XP_004853132.1
MATGGGPFEEGMNDQGLPNWSSDTVDDRLNNMDWGGQQKKANRSSEKNKKKFGVESDKRVTNDISPESSPGVGRRRTKTPHTFPHSRYMTQMSVPEQAELEKLKQRINFSDLDQRSIGSDSQGRATAANNKRQPSENRKPFNFLPMQINTNKSKDAVTSLQKREMIGSAQCKELFASALSNDLLQNYQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVEHLTHLIDHLKEQEKSYMKFLQKILGRDPEQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAVAVMDDSVVAETTGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPAVPDNRRQAESLSLTREVFQSRNPSVSEHLPDEKVQLFSKMRVLQEKKQKMDKLLGELHTLRDQHLNNSSFVPSSASPQKSTDQRSTSSAPSASVGLAPVVNGESNNGLTSSVPYPATSLVSQNESEREGHLNPTEKLQKLNEVRKRLNELRELVHYYEQTSDMMADAVNENTKDETEESEYDSERENSEPVVNIRNPQVSATWNEVNSNSNPQCVSNNRDGRSANSNCEINNRSAANLRALNMPPSLADCRYNREGDEGIHVAQGENDEEEEEEEEEAEEEVVSGASLSSHRSSLVDEAPEDAEFEQKVYRLMAAKQKLRQLQDLVAMVQDDDAAEGVISASTPNLGDVYPPEVEIKQNSNKARGNSNKTQKDTRVNEKAREKFYEAKLQQQQRELKQLQEERKKLIEIQEKIQALQKACPDLQLSAASVSNCPTKKYIPAVISTPTVNENETSTSKSVVDPDDSSVVDNELWSDMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETTSPVAVSLRSDGSENVCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEGIVRTDEEEEEQYASSSDNFSVYPPNSVNHNSHNVKETKNRWKNNRPFSADGNYRPLAKTRQQNISMQRQENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVNICQTLMQDQQTLSCLLQTLLTGPYSVMPSNVASPQVHLIMHQLNQCYTQLTWQQNNVQRLKQMLNELMHQQNHNPEKPGSKERGSNTSHPPSPSLFCPFSFPPQPVNLFNVPGFTNFASFAPGMNFSPLFPSPFGDFSQNISSSTEQQQPLAQNPSGKTEYMAFPKPFESSSSIGAEKQRNPKQPEEEVENSRTPWIYDQEGEIEKPFIKTGFTLSVEKTTNSNHKNQLDTSRRRRQFDEESIESFSSIPDPVDPTTVTKIFKTRKASAQASLASKDKTPKSKSKKRNSSHLKNRVKNVGYESASMSSACEPCQSRNRHSAQTEEPVQAKVFSRKNHEQLEKIIKYSRSAEISSAHARRILHQSNRNACNEAPETGSDFSMFEALRDTIYSEVATLISQNESRPHFLIELFHELQLLNTDYLRQRALYALQDIVSRHISESHEKEGENVKSVNSGTWIASNSELTPSESLATTDDETFENFERETHKISEQNDADNASVISVSSNFEPFATDDLGNTVIHLDQALARMREYERMKTEAESNSNVRCTCRVVEDEGTAAATTIVNNLEETPIIENHGSQQPVSEVSTVPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDDVCSSQLLTSVRRMVLTLTQQNDESKEFVKFFHKQLGSILQDSLTKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITVKQRCKRKIEAAGVIQSYAKEAKRILEGDHSSPAREIDDEDKDKDETETVKQTQTSEVYGAEGPKNVRSDVSDQEEDEESDGCPVSINLSKAETQALTNYGSGEDENEDEEIEEFEESPVDVQTSLQANTETIEENEHDDQVLQHELEKTAESTKIPSEQEHISKDDQDSSPMKPCYLNILENEQPLNSAAHKDSLTTVDSSQQPNPLPLPLTEIETLVPRVKEVKSAQETPESSLAGSPDTESPVLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRRKMVEEEQKNHLSGEICEMQTEELAGNSQTLKEPETVGAQSL