Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101722679

Database interlinks

Part of NW_004624769.1 (Scaffold)

For more information consult the page for NW_004624769.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIML1 ENSCPOG00000010743 (Guinea pig)

Gene Details

tripartite motif family-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009644, Guinea pig)

Protein Percentage 90.28%
CDS Percentage 90.64%
Ka/Ks Ratio 0.20421 (Ka = 0.052, Ks = 0.2544)

TRIML1 ENSG00000184108 (Human)

Gene Details

tripartite motif family-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000327738, Human)

Protein Percentage 81.16%
CDS Percentage 82.87%
Ka/Ks Ratio 0.1984 (Ka = 0.1111, Ks = 0.5599)

Triml1 ENSMUSG00000031651 (Mouse)

Gene Details

tripartite motif family-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000050267, Mouse)

Protein Percentage 77.11%
CDS Percentage 81.07%
Ka/Ks Ratio 0.18838 (Ka = 0.1233, Ks = 0.6545)

Triml1 ENSRNOG00000014502 (Rat)

Gene Details

Protein Triml1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019474, Rat)

Protein Percentage 76.89%
CDS Percentage 80.78%
Ka/Ks Ratio 0.18707 (Ka = 0.1264, Ks = 0.6754)

Genome Location

Sequence Coding sequence

Length: 1404 bp    Location: 19097470..19102903   Strand: +
>XM_004853064.1
ATGTCTACAGCAGATTTGATGGAGAATCTGAGGGAAGAACTCACTTGCTTCATCTGCTTGGACTATTTTAGCAGCCCGGTGATCACTGATTGTGGGCACAGCTTTTGTCTGATGTGTCTCCTCAAGAACTGGGAGGAGCAAAACACACTGTTGTCTTGCCCTGAATGCTGGAGGACTTTGAGGGGGCCTCACTTCCAGCCCAATGAGCAGCTGGGGAGGCTGGCTAGCATTGGCAGGCAGCTCAGGTCTCAGGTCCTGCAGAGTAAGGATGGCTCAGGCAGCTGTGGGAGGATGGTGGCAGCCACTTGTGTGTTCTCTGATGATGAGCAGAGCATCTCTGCTTTGCCAACTCAAAGTCATAGAATAAACAGAGTGCATCTCTCAAGTGAGGTTGAGGAGCAACATAAAGAGAAACTCCAAGAAATCTTAAATCTTTTGCATAAAAAGAAGGAAGCTCAAGCGGTCCTGACCCACGAGAAGGAGAGAATGATACTGTGTAAGGAAGAGACAAAGACTTTTAAACAGGTTGTCATGTCAGAATATATGAAAATGCACCAGTTCCTGAAGGAAGAGGAGCAGCTCCAGCTGCAGCTTCTAGACAAGGAGGAGAGGGAGAACTTGAAGAAACTGTGGGATAATGAAGTCAAGCTGACCCAGCAAGTCAGACACCTAAGCAAAATGATTGGGCAGATAGAGTGCACATATCAGAGCTCAAATTTAGACTCTTTTGAGGAAGTAAGAGGAGCCTTGGAAAGGAGCGAATCACGGCTGCTTCAATGTGCAGAAGCCACCACCACACAACTGAGTCAGTGCCAAGTCACTGGAATGAGGGAGATGTTAAGAAAATTCAGCACAGAGATCACTCTGGATCCAGCCACAGCCAGTGCCTATCTAGTCTTGTCTCAGGATCTGAAAAGTGTGAGATATGGAGGAAGCAGACAGCAGTTACCCAACAACCCAGAAAGATTTGACCAGTCTGCAACCGTGTTGGGAGCTCAGATCTTCACCAGTGGGAGACACTACTGGGAGGTGGAAGTGGGAAACAAGACAGAGTGGGAAGTGGGGATCTGTAAGGACTCTGTGAGCAGAAAGGGGAATCTCCCCAAGACCCCCGGGGACCTTCTCTCACTTATAGGTTTAAAAATTGGAGAGGATTACAGCCTGTGGGTCTCATCACCTTTGAAAGGGCAGCATGTCCGAGAGTCTGTGCATCAGGTTGGTGTTTTCTTAGACTATGAGTGTGGACATATCACATTTTACAATGTGACAGACAAGTCCTTCATCTACAGTTTTCCTCCAACCCCTTTCCAAGATGCACTCAGGCCTATCTTTTCCCCTTGCCTCCCAAATGAAGGGACAAACACAAACCCTCTTACCATCTGCTCACTGAATAGCCACAACTGA

Related Sequences

XP_004853121.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase TRIML1 [Heterocephalus glaber]

Length: 467 aa      View alignments
>XP_004853121.1
MSTADLMENLREELTCFICLDYFSSPVITDCGHSFCLMCLLKNWEEQNTLLSCPECWRTLRGPHFQPNEQLGRLASIGRQLRSQVLQSKDGSGSCGRMVAATCVFSDDEQSISALPTQSHRINRVHLSSEVEEQHKEKLQEILNLLHKKKEAQAVLTHEKERMILCKEETKTFKQVVMSEYMKMHQFLKEEEQLQLQLLDKEERENLKKLWDNEVKLTQQVRHLSKMIGQIECTYQSSNLDSFEEVRGALERSESRLLQCAEATTTQLSQCQVTGMREMLRKFSTEITLDPATASAYLVLSQDLKSVRYGGSRQQLPNNPERFDQSATVLGAQIFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKTPGDLLSLIGLKIGEDYSLWVSSPLKGQHVRESVHQVGVFLDYECGHITFYNVTDKSFIYSFPPTPFQDALRPIFSPCLPNEGTNTNPLTICSLNSHN