Details from NCBI annotation

Gene Symbol Tlr3
Gene Name toll-like receptor 3, transcript variant X2
Entrez Gene ID 101716400

Database interlinks

Part of NW_004624769.1 (Scaffold)

For more information consult the page for NW_004624769.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TLR3 ENSCPOG00000004929 (Guinea pig)

Gene Details

Cavia porcellus toll-like receptor 3 (Tlr3), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004438, Guinea pig)

Protein Percentage 89.5%
CDS Percentage 91.27%
Ka/Ks Ratio 0.27304 (Ka = 0.0563, Ks = 0.2062)

TLR3 ENSG00000164342 (Human)

Gene Details

toll-like receptor 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000296795, Human)

Protein Percentage 83.19%
CDS Percentage 85.62%
Ka/Ks Ratio 0.24492 (Ka = 0.0956, Ks = 0.3904)

Tlr3 ENSMUSG00000031639 (Mouse)

Gene Details

toll-like receptor 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034056, Mouse)

Protein Percentage 78.9%
CDS Percentage 80.11%
Ka/Ks Ratio 0.20341 (Ka = 0.1322, Ks = 0.6499)

Tlr3 ENSRNOG00000021726 (Rat)

Gene Details

toll-like receptor 3 (Tlr3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036680, Rat)

Protein Percentage 79.23%
CDS Percentage 79.93%
Ka/Ks Ratio 0.20239 (Ka = 0.1323, Ks = 0.6537)

Genome Location

Sequence Coding sequence

Length: 2718 bp    Location: 16926257..16944531   Strand: +
>XM_004853047.1
ATGAAAGGGCCTTTGCCTTATAATATCTATGCCTTGTTGGGACTGTGGCCCCTTTGGATTTTGTGTACCACCTCGACCAACAAATGCACAGTGACACGTGAAGTAGCTGATTGCAGTCATTTGAAGCTGATGCAGGTGCCTGACAACCTTCCCACAAACATAACAGTGTTGAATCTGACCCACAACCAGCTCAGAAGATTGCCACCTGCCAATTTTACAAGATATAGCAAACTTACTGTCTTGGATGGAGGATTTAACAGCATTTCAAAACTAGAGCCAGAACTGTGCCAAAATCTGCCTTTTTTGAAAGTTTTGAACCTCCAACATAATGAGCTATCTCATCTCTCTGATAAAACCCTCATGTTTTGCATGAATTTGACTGAACTCCGTTTAATGTCCAACTCAATCCAGAAAATTCAAAACAATCCTTTTAAAAACCAAAAGAATTTACTCAAACTAGATCTGTCTCATAATGGTTTATCATCTACACAATTAGGAACTCAGCTCCAACTAGAAAATCTCCAGGAACTTCTACTATCAAATAATAAAATTCATTCACTAAGAGGTGAAGAACTTGATTTCCTTGGTAATTCTTCCTTACAAAAATTAGACTTGTCATCAAATCAAATTAAAGAGTTTTCTCCAGGGTGTTTTCATGTGATTGGAAAATTATTTGGTCTCTTTTTGAACAATGCTCAACTGGGCCCTAGTCTCACAGAGAAGCTTTGTTTGGAATTATCAAATACAAGCATCCAGAATCTGTCTCTGAGTAATATCCAGCTATATAGAACAAGCAACACAACTTTCTTTGGACTAAAGCAGACCAACCTCACCATGCTCGACCTTTCCCACAACTACTTAAATGTGGTTGATAATGGTTCCTTTTCTTGGCTTCCACATCTGAAATATTTCTTCCTGGAATATAATAATGTAGCACATTTGTCTTCTCACTCTTTTTATGGGCTTTTCAATGTGAGATACCTGAATTTGAAACGATCTTTTACTAAACAAAGTATATCCCTTGCTTTACTTCCAAAGATTGATGATTTTTCTCTTCAGTGGCTAAAATGTTTGGAGTACCTTAACATGGAGGATAACAATATTCCAGGCATAAAACGCAGTATGTTCACTGGATTGATAAATCTAAAATATTTAAGTCTATCCAACACTTTCACAAGTTTGCAAACTTTAACAAATGAAACATTTTTATCACTTGCTCATTCTCCTTTACGTGTGCTCAACTTAACCAGAAATAAAATCTCAAAAATAGAGAGTGGTACTTTTTCTTGCTTGGGATACCTAGAAGTACTTGACCTTGGCCTTAATGAAATTGAGCAAGAACTCACAGGCCAGGAATGGAGAGGTCTAGGAAATATTTTTGAAATCTACCTTTCCTACAACAAATACCTACAACTGACTAGCAAATCCTTTGCATCGGTCCCAGGACTCCAACGACTGATGCTCCGAAGAGTGGTCCTTAAAAATGTGGACAGCTCTCCTTCACCTTTCCGCAGTCTTCATAACTTGACCATTCTGGATCTAAGCAACAACAACATAGCCAGCATCAATGATGACATGTTAGAAGGTCTTGAGAAGCTAGAAATTCTGGATTTGCAGCATAATAACTTAGCAAGGCTCTGGAAACATGCAAACCCTGGTGGTCCTGTTCATTTTCTACAGGGTCTTCCCCACCTCCATATCCTTGACTTAGAGTCTAATGGCTTTGATGAAATTCCAGCAGATATGTTCAAGGACTTGTTTGAACTTAAGAGCATCAATTTAGGATTGAATAATTTAAACGTACTTCCACCATCTCTCTTTGACCATCAGATGTTTCTGAAGTCCCTGAACCTTCAAAAGAATCTCATAACATCAGTTGAGAAGAACGTTTTTGAACCAGTTTTCAAGAACTTGACTTATTTAGATATGCGCTTTAATCCATTTGATTGTACATGTGAAAGCATTGCTTGGTTTGTTAATTGGATTAATAAGACCCATACTAACATCTCAGAACTATCAAGTCATTACATCTGCAACACTCCACCTCAATATCATGGGTTCCCGGTGATGCTTTTTGATACAGCACCCTGCAAAGACAGTGCCCCCTTTGAACTCTTTTTTGTGATCAGTACCAGTTTGCTTTTATCTTTTATCTTTATTGTATTGCTCATCCATTTTGAGGGCTGGAGGATATCTTTTTATTGGAATGTTTTGGTCCATCGAGTTCTTGGTTTCAAGGAAGTAGATGGGCAGCCAGAACAATTTGAATACACAGCATATATAGTTCATGCCTATAAAGATAGAGATTGGGTCTGGGAAAACTTCTCCCCAATGGAAGAAAAAGACCAATCTCTCAAATTTTGTCTGGAAGAAAGGGACTTTGAAGCAGGTGTCCTTGGACTTGAAGCAATTGTTAATAGCATCAAAAGAAGCAGAAAAATTATTTTTGTTCTAACACAGCATCTATTAAAAGATCCACTGTGCAAAAGATTCAAGGTGCATCATGCAGTTCATCAGGCTATTGAACAAAATCTAGATTCCATTATATTGGTTTTTCTTGAGGACATTCCAGATCATAAGCTTAACCATGCACTTTTTTTGAGAAGAGGAATGTTTAAGTCTCACTGCATCTTGAACTGGCCAGTTCAGAAGGAACGGATAAATGCCTTTCACCATAAATTGCAAGTAGCACTTGGATCCCGAAATTCAGCGTATTAA

Related Sequences

XP_004853104.1 Protein

Tlr3 PREDICTED: toll-like receptor 3 isoform X2 [Heterocephalus glaber]

Length: 905 aa      View alignments
>XP_004853104.1
MKGPLPYNIYALLGLWPLWILCTTSTNKCTVTREVADCSHLKLMQVPDNLPTNITVLNLTHNQLRRLPPANFTRYSKLTVLDGGFNSISKLEPELCQNLPFLKVLNLQHNELSHLSDKTLMFCMNLTELRLMSNSIQKIQNNPFKNQKNLLKLDLSHNGLSSTQLGTQLQLENLQELLLSNNKIHSLRGEELDFLGNSSLQKLDLSSNQIKEFSPGCFHVIGKLFGLFLNNAQLGPSLTEKLCLELSNTSIQNLSLSNIQLYRTSNTTFFGLKQTNLTMLDLSHNYLNVVDNGSFSWLPHLKYFFLEYNNVAHLSSHSFYGLFNVRYLNLKRSFTKQSISLALLPKIDDFSLQWLKCLEYLNMEDNNIPGIKRSMFTGLINLKYLSLSNTFTSLQTLTNETFLSLAHSPLRVLNLTRNKISKIESGTFSCLGYLEVLDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQLTSKSFASVPGLQRLMLRRVVLKNVDSSPSPFRSLHNLTILDLSNNNIASINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPVHFLQGLPHLHILDLESNGFDEIPADMFKDLFELKSINLGLNNLNVLPPSLFDHQMFLKSLNLQKNLITSVEKNVFEPVFKNLTYLDMRFNPFDCTCESIAWFVNWINKTHTNISELSSHYICNTPPQYHGFPVMLFDTAPCKDSAPFELFFVISTSLLLSFIFIVLLIHFEGWRISFYWNVLVHRVLGFKEVDGQPEQFEYTAYIVHAYKDRDWVWENFSPMEEKDQSLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIFVLTQHLLKDPLCKRFKVHHAVHQAIEQNLDSIILVFLEDIPDHKLNHALFLRRGMFKSHCILNWPVQKERINAFHHKLQVALGSRNSAY