Details from NCBI annotation

Gene Symbol Vegfc
Gene Name vascular endothelial growth factor C, transcript variant X1
Entrez Gene ID 101719504

Database interlinks

Part of NW_004624769.1 (Scaffold)

For more information consult the page for NW_004624769.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VEGFC ENSCPOG00000014375 (Guinea pig)

Gene Details

vascular endothelial growth factor C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012949, Guinea pig)

Protein Percentage 91.93%
CDS Percentage 92.34%
Ka/Ks Ratio 0.17913 (Ka = 0.0395, Ks = 0.2205)

VEGFC ENSG00000150630 (Human)

Gene Details

vascular endothelial growth factor C

External Links

Gene Match (Ensembl Protein ID: ENSP00000280193, Human)

Protein Percentage 87.98%
CDS Percentage 90.06%
Ka/Ks Ratio 0.21722 (Ka = 0.0599, Ks = 0.2757)

Vegfc ENSMUSG00000031520 (Mouse)

Gene Details

vascular endothelial growth factor C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033919, Mouse)

Protein Percentage 87.62%
CDS Percentage 87.38%
Ka/Ks Ratio 0.13385 (Ka = 0.0595, Ks = 0.4446)

Vegfc ENSRNOG00000011416 (Rat)

Gene Details

vascular endothelial growth factor C (Vegfc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015529, Rat)

Protein Percentage 87.38%
CDS Percentage 88.35%
Ka/Ks Ratio 0.17138 (Ka = 0.0623, Ks = 0.3637)

Genome Location

Sequence Coding sequence

Length: 1263 bp    Location: 7817433..7690589   Strand: -
>XM_004852960.1
ATGCACTTGCTAGGCTGCTTCTCTCTGGCGTGTTCCCTGCTCGCCGCTGCGCTGCTCCCCGGACCGCGCGAGGCGCCCGCCGCCGCCTCCGCCGCCGCCTCCGCCTTCGAGTCGGGACTCGGCTTCTTGGACGCGGAGCCGGACGGGGGCGAGGTCAAGGTTTATGCAGGCAAAGATCTAGAAGAGCAGTTGCGGTCTGTGTCAAGCGTCGATGAACTCATGTCTGTACTCTACCCAGAATATTGGAAAATGTACAAGTGTCAGTTAAGGAAAGGAGGCTGGCAATACAATAAAGAACAGCCCAACCTCAACACGAGGACAGAAGAGACTATAAAATTTGCTGCAGCTCATTATAATGCAGAAATCCTGAAAAGTATTGATAATGAATGGAGAAAGACGCAATGCATGCCACGTGAGGTGTGTATAGATGTGGGGAAGGAGTTTGGAGCAGCAACAAACACCTTCTTTAAACCTCCATGTGTGTCCGTCTACAGATGTGGGGGCTGCTGCAACAGTGAGGGGGTGCAATGCATGAACACCAGCATGGGCTACCTCAGCAAGACGTTGTTTGAAATTACAGTGCCTCTCTCTCAAGGCCCCAAACCAGTAACAATCAGTTTTGCCAATCACACTTCCTGCCGATGCATGTCTAAACTGGATGTTTACAGACAAGTTCACTCAATTATTAGACGTTCCCTGACAGCAGCATTGCCACAATGTCAGGCTGCCAACAAGACTTGCCCCCCAAATTACGTGTGGAATAATCACATCTGCAGATGTCTGGCTCAAGAAGATTTTATGTTTTCCTCAAATGCTGGAGATGATGGATTCCATGACATCTGTGGACCGAACAAGGAGCTGGATGAGGAGAGCTGCCAGTGTGTTTGCAGAGGGGGCCTCCAGCCTTCCAGCTGTGGACCCCACAAAGAACTAGACAGGAAGTCATGCCAGTGTGTCTGTAAAAACAAACTTTTCCCCACCTCATGTGGCACCAACAGAGAATTTGATGAGAACACATGCCAGTGTGTGTGCAAAAGAACCTGCCCAAGAAATCAACCACTAAATCCTTCAAAATGTACCTGTGAATGTACAGAAAATCCACAGAAATGCTTGTTACAAGGAAAGAAATTCCAATATCAAACGTGCAGTTGTTACAGACGACCATGTACAAATCGACTGAGGCATTGCGATCAGGGACTTTCATTTAGTGAAGAAGTATGTCGCTGTGTCCCTTCATATTGGAAACGACCACATGTGAACTAA

Related Sequences

XP_004853017.1 Protein

Vegfc PREDICTED: vascular endothelial growth factor C-like isoform X1 [Heterocephalus glaber]

Length: 420 aa      View alignments
>XP_004853017.1
MHLLGCFSLACSLLAAALLPGPREAPAAASAAASAFESGLGFLDAEPDGGEVKVYAGKDLEEQLRSVSSVDELMSVLYPEYWKMYKCQLRKGGWQYNKEQPNLNTRTEETIKFAAAHYNAEILKSIDNEWRKTQCMPREVCIDVGKEFGAATNTFFKPPCVSVYRCGGCCNSEGVQCMNTSMGYLSKTLFEITVPLSQGPKPVTISFANHTSCRCMSKLDVYRQVHSIIRRSLTAALPQCQAANKTCPPNYVWNNHICRCLAQEDFMFSSNAGDDGFHDICGPNKELDEESCQCVCRGGLQPSSCGPHKELDRKSCQCVCKNKLFPTSCGTNREFDENTCQCVCKRTCPRNQPLNPSKCTCECTENPQKCLLQGKKFQYQTCSCYRRPCTNRLRHCDQGLSFSEEVCRCVPSYWKRPHVN