Sequence details NCBI ID: XM_004852951.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gpm6a
Gene Name glycoprotein M6A, transcript variant X1
Entrez Gene ID 101716059

Database interlinks

Part of NW_004624769.1 (Scaffold)

For more information consult the page for NW_004624769.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPM6A ENSCPOG00000002299 (Guinea pig)

Gene Details

glycoprotein M6A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002088, Guinea pig)

Protein Percentage 99.64%
CDS Percentage 96.16%
Ka/Ks Ratio 0.01177 (Ka = 0.0017, Ks = 0.1466)

GPM6A ENSG00000150625 (Human)

Gene Details

glycoprotein M6A

External Links

Gene Match (Ensembl Protein ID: ENSP00000280187, Human)

Protein Percentage 99.64%
CDS Percentage 93.29%
Ka/Ks Ratio 0.00578 (Ka = 0.0017, Ks = 0.2957)

Gpm6a ENSMUSG00000031517 (Mouse)

Gene Details

glycoprotein m6a

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033915, Mouse)

Protein Percentage 99.28%
CDS Percentage 91.13%
Ka/Ks Ratio 0.00796 (Ka = 0.0034, Ks = 0.4265)

Gpm6a ENSRNOG00000010731 (Rat)

Gene Details

glycoprotein m6a (Gpm6a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014312, Rat)

Protein Percentage 100.0%
CDS Percentage 93.17%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.334)

Genome Location

Sequence Coding sequence

Length: 837 bp    Location: 6904371..6763154   Strand: -
Raw sequence   
>XM_004852951.1
ATGGAAGAGAATATGGAAGAGGGACAGACACAAAAAGGGTGTTTTGAGTGCTGTATTAAATGCTTGGGAGGGATTCCTTATGCTTCTCTCATTGCCACTATCCTGCTCTATGCGGGTGTCGCCCTGTTCTGCGGCTGCGGTCATGAAGCCCTCTCTGGGACTGTCAACATTCTGCAGACCTACTTTGAAATGGCAAGAACTGCTGGAGATACACTGGATGTTTTCACCATGATTGACATCTTTAAGTATGTGATCTACGGCATTGCAGCTGCATTCTTTGTGTATGGCATTTTGCTGATGGTGGAAGGTTTCTTCACAACTGGTGCCATCAAAGATCTCTATGGAGATTTCAAGATCACCACTTGTGGAAGATGTGTTAGCGCCTGGTTTATTATGCTGACGTACCTTTTCATGTTGGCCTGGCTGGGAGTCACAGCTTTCACCTCACTGCCCGTTTACATGTACTTCAATGTGTGGACCATCTGCCGGAATACTACCCTGGTGGAGGGGGCAAATCTCTGCTTGGACCTTCGTCAGTTTGGCATTGTGACAATTGGAGAGGAAAAGAAAATTTGCACTGTCTCTGAGAACTTCCTGAGGATGTGTGAATCTACTGAGCTAAACATGACCTTCCACTTGTTTATTGTGGCGCTTGCTGGAGCTGGAGCAGCAGTGATTGCTATGGTTCACTACCTTATGGTCCTCTCTGCCAACTGGGCCTATGTAAAAGATGCCTGCCGGATGCAGAAATATGAAGACATCAAGTCAAAGGAGGAGCAAGAGCTTCATGACATCCATTCCACTCGCTCCAAAGAGCGGCTCAATGCATACACATAA

Related Sequences

XP_004853008.1 Protein

Gpm6a PREDICTED: neuronal membrane glycoprotein M6-a isoform X1 [Heterocephalus glaber]

Length: 278 aa      View alignments
>XP_004853008.1
MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNVWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT