Details from NCBI annotation

Gene Symbol Hpgd
Gene Name hydroxyprostaglandin dehydrogenase 15-(NAD), transcript variant X1
Entrez Gene ID 101714528

Database interlinks

Part of NW_004624769.1 (Scaffold)

For more information consult the page for NW_004624769.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HPGD ENSCPOG00000001979 (Guinea pig)

Gene Details

hydroxyprostaglandin dehydrogenase 15-(NAD)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001789, Guinea pig)

Protein Percentage 93.54%
CDS Percentage 90.49%
Ka/Ks Ratio 0.1091 (Ka = 0.0379, Ks = 0.347)

HPGD ENSG00000164120 (Human)

Gene Details

hydroxyprostaglandin dehydrogenase 15-(NAD)

External Links

Gene Match (Ensembl Protein ID: ENSP00000296522, Human)

Protein Percentage 89.47%
CDS Percentage 91.1%
Ka/Ks Ratio 0.22501 (Ka = 0.0542, Ks = 0.2408)

Hpgd ENSMUSG00000031613 (Mouse)

Gene Details

hydroxyprostaglandin dehydrogenase 15 (NAD)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034026, Mouse)

Protein Percentage 86.47%
CDS Percentage 85.21%
Ka/Ks Ratio 0.13197 (Ka = 0.0746, Ks = 0.5656)

Hpgd ENSRNOG00000010610 (Rat)

Gene Details

hydroxyprostaglandin dehydrogenase 15 (NAD) (Hpgd), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014229, Rat)

Protein Percentage 86.84%
CDS Percentage 85.59%
Ka/Ks Ratio 0.14233 (Ka = 0.0757, Ks = 0.532)

Genome Location

Sequence Coding sequence

Length: 801 bp    Location: 6139458..6102529   Strand: -
>XM_004852947.1
ATGCATGTGAACGGCAAAGTGGCACTGGTGACCGGCGCTGCGCAGGGCATAGGCAGAGCCTTTGCAGAAGAGCTGCTGCATAAGGGCGCCAAGGTAGCGCTGGTGGACTGGAATCTTGAAGCAGGTGTAAAGTGTAAAGCTGCCCTGGATGAGCAGTTTGAACCTCAGAAGACTCTGTTCATCCAATGTGATGTGGCCGACCAGGAACAATTGAGAGATACTTTTAGAAAAGTTGTAGACTACTTTGGAAGATTGGACATCTTGGTCAATAACGCTGGAGTGAATAATGAGAAAAACTGGGAAAAAACACTGCAGATTAATTTGGTTTCTGTTATCAGTGGAACCTATCTTGGTTTGGATTACATGAGTAAGCAACATGGAGGTGAAGGTGGCGTCATTATTAATATGTCATCTTTAGCAGGACTGATGCCTGTGGCACAACAGCCTGTTTACTGTGCCTCAAAGCACGGCATAATCGGATTCACACGCTCAACAGCGATGGCTGCTAAGCTGATGAACAGTGGTGTGAGAATGAATGCCATTTGCCCGGGCTTTGTCAACACACCCATCCTTCAATCTATTGAAAAAGAAGAAAACATGGGACAATATATAGAATATACAGGGTATATCAAGGACATGATGAAATGTCATGGAATTTTGGACCCATCAATGATTGCCAATGGATTAATAACACTCATTGAAGATGATGATTTGAATGGCGCTATTATGAAGATCACAACTTCTAAAGGAATTCATTTTCAAGACTATGATACAGCTCCATCTTATGCAAAAGATAAATGA

Related Sequences

XP_004853004.1 Protein

Hpgd PREDICTED: 15-hydroxyprostaglandin dehydrogenase [NAD(+)] isoform X1 [Heterocephalus glaber]

Length: 266 aa      View alignments
>XP_004853004.1
MHVNGKVALVTGAAQGIGRAFAEELLHKGAKVALVDWNLEAGVKCKAALDEQFEPQKTLFIQCDVADQEQLRDTFRKVVDYFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSTAMAAKLMNSGVRMNAICPGFVNTPILQSIEKEENMGQYIEYTGYIKDMMKCHGILDPSMIANGLITLIEDDDLNGAIMKITTSKGIHFQDYDTAPSYAKDK