Details from NCBI annotation

Gene Symbol Tmc3
Gene Name transmembrane channel-like 3
Entrez Gene ID 101698257

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMC3 ENSCPOG00000000308 (Guinea pig)

Gene Details

transmembrane channel-like 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000268, Guinea pig)

Protein Percentage 86.31%
CDS Percentage 88.09%
Ka/Ks Ratio 0.24304 (Ka = 0.0797, Ks = 0.3279)

TMC3 ENSG00000188869 (Human)

Gene Details

transmembrane channel-like 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000352413, Human)

Protein Percentage 81.26%
CDS Percentage 83.55%
Ka/Ks Ratio 0.19458 (Ka = 0.1054, Ks = 0.5416)

Tmc3 ENSMUSG00000038540 (Mouse)

Gene Details

transmembrane channel-like gene family 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046028, Mouse)

Protein Percentage 78.24%
CDS Percentage 80.38%
Ka/Ks Ratio 0.17961 (Ka = 0.1278, Ks = 0.7116)

Tmc3 ENSRNOG00000025088 (Rat)

Gene Details

transmembrane channel-like 3 (Tmc3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037802, Rat)

Protein Percentage 77.88%
CDS Percentage 79.77%
Ka/Ks Ratio 0.17105 (Ka = 0.1312, Ks = 0.7668)

Genome Location

Sequence Coding sequence

Length: 3285 bp    Location: 20539513..20577630   Strand: +
>XM_004852913.1
ATGAAACCCTCAAAGGCGTCCCAGCGCTACAGAAGCATCCGAAGAAATGCCAGCCAACACTACCTCTACCAGGAGTCCCTGCTTTTCAGTAACTTGGATGACAGCTTTAATGCTGATGAAACGGGGGACAGCAGTGACCCGGAACAAATCTTCCAGAACATACAGTTCCAGAAAGATCTCGTGGCAAATATTCGCTGCAGACCCTGGACCATGGGACAGAAGCTGAGGGCGCTGAGACGAGCGAAGGAGATTGTGCTGAAGTTTGAAGGGAGGCTGACCAGGACTCGAGGCTACCAAGCAGCAGGCGCAGAGCTATGGCGGAAGTTTGCTCGTCTGGCCTGTAATTTTGTGGTCATCTTCATCCCCTGGGAAATGAGGATAAAGAAAATCGAGAGTCATTTTGGATCAGGTGTGGCCTCGTATTTCATATTCCTGAGATGGTTATTTGGAATTAACATTATGCTCACAATTATGACAAGTGCTTTCATTGTCATTCCAGAGCTGATCGCTGGCCAGCCCTTCGGAAGCACCGCCAGGAAGACCATCCCCCCGGAGCAGGCTGCATCCGCCCAGGACCTGAACACCGTCTGGTCCCTCGGGGGCTACCTTCAGTACTCCGTCCTCTTCTACGGCTACTACGGCAGGGAAAGGAGGATCGGGAGAGCTGGCTACCGTCTGCCCCTGGCGTACTTCCTGGTGGGGATGGCCGTGTTCGCTTACAGCTTTGTCATTCTTTTAAAAAAGATGGCGAAGAACTCCCGCACAAGCCTGGCCAGTGCTTCCAATGAAAACTACACCTTCTGCTGGCGGGTGTTCTGTGCCTGGGACTACCTCATCGGAAACCCAGAGGCTGCGGAGAGCAAGACGGCTGCCGTGGTCAACAGCATCAGGGAGGCTATCCTGGAAGAACAGGAAAAGAAGAAAAGCAAAAACCTGGTCGTGACCATCTGCCTGAGGATCATTGCCAACATCCTGGTACTGCTCTCACTGGCCGGGAGCATCTATCTCATCTACTTCGTGGTGGACCGGTCTCAGAAGTTGGAGCAGTCAAAGAAGGAGTTGACGCTCTGGGAAAAGAATGAGGTGAGCGTGGTGGTGTCCCTCGTCACCATGTTGGCACCGTCTGCCTTTGACCTCATCGCTGCCTTGGAGATGTACCACCCCCGGACCACGCTGCGCTTCCAACTGGCAAGGGTCCTCGTGCTATATTTGGGGAATCTCTACAGCCTGATCATTGCTCTCCTGGACAAAGTGAACAGCATGAGCACTCAGGAAGTAGCCTCAAAATATAACACAAGTGCTTGGATGGATTCTACCACCTTCTTTGCCACCACGGCAGCCCCTGAAGAAGGGAAATGGCCCACACCTGGGTCTGGAACAGGGATCAGGGGAAATGGCACATGGGTCTTAGAGGAGATGAGGGTCCCAACATACACAGTGCCACTCAACAAGGTCAACAAGACCACACTCCACAACCAGAGTCTACAAGGCCAGTGCTGGGAAACATACGTGGGCCAGGAGATGCTAAAGCTGTCCATCATAGACATGCTGTTCACTGTGGCCAGCATCCTGCTGATAGACTTCTTTCGAGGACTTTTCGTTCGCTACTTAAGTGACTACTGGTGCTGGGACTTGGAAAGCAAATTTCCTGAATATGGGGAATTCAAAATAGCTGAGAATGTGCTACACTTAGTCTACAACCAAGGAATGATTTGGATGGGTGCCTTCTTCTCCCCCTGCCTGCCTGCAGTCAACGTCCTCAAACTCATCGGACTCATGTACCTGAGGAGCTGGGCAGTGCTCACCTGCAACGCACCCCACCAACAGGTGTTCCGTGCATCCAGGTCCAACAACTTCTACCTAGCCATGCTCCTGTTCATGTTGTTCCTGTGCATGCTGCCCACCGTCTTCGCTATCGTGCGGTACAAGCCGTCCCTAAACTGCGGGCCCTTCAGTGGACAAGAGAAAATCTACGACATTGTGTCGGAAACGATTGAGAACGACTTCCCTGGGTGGGTCAGTTCCGTGGTCGGGCACCTCAGCAGCCCTGTGGTCATCCTGCCCGCTGTGCTGCTGCTGTTCATGCTCATCTATTACCTGCAGAGCATTGCACGCTCACTGAAGCTCAGCAACCAGCAGCTCAGAGTGCAGATCCAAAATGCAAGATCCGAAGATAAGAAGAAGGCCGCCCAGATGGTAGAAGCTCGAATCCAGACCCAGGAGGAAAGCTCCAAGAGGCTTCCAAAGGACAGTGACCTCGCACACGTGGTGACACCCCTCAACAATGGCACTGTGGTCAGCTTAGACTCCCTGAGCACCGGGAGCAGCAGGATAGAGGCCATCAGTCATCCTGTGCCCCAGAGCCCGGGGCTGGGCCACAGGGGTCCCTGCTCACCTCTTCCTGGTGTCCACAAACCAAGGCCAGAGCATGATGCTGACAGGTATGGACAGGGGCCATGGGCCAGCACAGGGGACCTTCACCAGAACAGGGCCTTCACACCTGTGACACTGCCACAGCATATCGAGGATGTACGATCAGAACCTCTTTTCCGAAGAGACTTCCGGCCAGTCTATCTTCCTCTCCGGAGCCCCAAGGTCTCGGCTTTCGTAGCGCGTGGTCATAGGCCTCAAACCCCCAGGAACTATCTCATGCATGAGCGTGACTCCCACCAAAAGCCCCATCTGACTTTCTGGCCAGAAAGACATTTCAAGATGGACGCTTCTGGTGACATGGTGGAGGTGTACCCCAGGAACATGCGACAGCACATGTCTTGGGTGCCCCTGAAGCCTGGCTCTCCACAGCTGAGTGAAGAAGAAGAGGAGACGCCGAGGAGAGGTGTAGGCCAACGGCCATTCGCCCCTCGCTCCCAGGTGGACCTCCATCAACCCCCTCATTTTTACATTGGTGAGAGGTCCAGAATCAGGACCCGAGATCCTGAGCTCCGGGGAAGGAGGCGCTGTAAGTCTGGGGGTGACGGTTTTGAGGGTCAAGCCAACAGGCCCATGTCTGTGCCCAGGAGGCCATGCTCCGGGCACCTGCAGTACCCACAGCATCCTCTGCAGCCCCGGGCCTGGCCCAAGTTCGAGCCGTCCTTCACAGATTCTGACTCCATGTCGGTGTTGTCCAGCAGTGACCAGCAAAACAGCAGCACTGACCAGTACCTGCAAGTCACCCGCAGCCAGGACAGGCTCCCGAGGGCCATGGGACAAGCTGGCCGGAAGAAGGCCAAGTCTCGGCGGGCACTGCCCACTGATCTGGATGACCTGGTCTGTTCCAAAGTCTAG

Related Sequences

XP_004852970.1 Protein

Tmc3 PREDICTED: transmembrane channel-like protein 3 [Heterocephalus glaber]

Length: 1094 aa      View alignments
>XP_004852970.1
MKPSKASQRYRSIRRNASQHYLYQESLLFSNLDDSFNADETGDSSDPEQIFQNIQFQKDLVANIRCRPWTMGQKLRALRRAKEIVLKFEGRLTRTRGYQAAGAELWRKFARLACNFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIMLTIMTSAFIVIPELIAGQPFGSTARKTIPPEQAASAQDLNTVWSLGGYLQYSVLFYGYYGRERRIGRAGYRLPLAYFLVGMAVFAYSFVILLKKMAKNSRTSLASASNENYTFCWRVFCAWDYLIGNPEAAESKTAAVVNSIREAILEEQEKKKSKNLVVTICLRIIANILVLLSLAGSIYLIYFVVDRSQKLEQSKKELTLWEKNEVSVVVSLVTMLAPSAFDLIAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVNSMSTQEVASKYNTSAWMDSTTFFATTAAPEEGKWPTPGSGTGIRGNGTWVLEEMRVPTYTVPLNKVNKTTLHNQSLQGQCWETYVGQEMLKLSIIDMLFTVASILLIDFFRGLFVRYLSDYWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAVNVLKLIGLMYLRSWAVLTCNAPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYKPSLNCGPFSGQEKIYDIVSETIENDFPGWVSSVVGHLSSPVVILPAVLLLFMLIYYLQSIARSLKLSNQQLRVQIQNARSEDKKKAAQMVEARIQTQEESSKRLPKDSDLAHVVTPLNNGTVVSLDSLSTGSSRIEAISHPVPQSPGLGHRGPCSPLPGVHKPRPEHDADRYGQGPWASTGDLHQNRAFTPVTLPQHIEDVRSEPLFRRDFRPVYLPLRSPKVSAFVARGHRPQTPRNYLMHERDSHQKPHLTFWPERHFKMDASGDMVEVYPRNMRQHMSWVPLKPGSPQLSEEEEETPRRGVGQRPFAPRSQVDLHQPPHFYIGERSRIRTRDPELRGRRRCKSGGDGFEGQANRPMSVPRRPCSGHLQYPQHPLQPRAWPKFEPSFTDSDSMSVLSSSDQQNSSTDQYLQVTRSQDRLPRAMGQAGRKKAKSRRALPTDLDDLVCSKV