Sequence details NCBI ID: XM_004852902.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pcsk6
Gene Name proprotein convertase subtilisin/kexin type 6
Entrez Gene ID 101721857

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCSK6 ENSCPOG00000005722 (Guinea pig)

Gene Details

proprotein convertase subtilisin/kexin type 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005160, Guinea pig)

Protein Percentage 96.15%
CDS Percentage 93.67%
Ka/Ks Ratio 0.0806 (Ka = 0.0193, Ks = 0.2389)

PCSK6 ENSG00000140479 (Human)

Gene Details

proprotein convertase subtilisin/kexin type 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000305056, Human)

Protein Percentage 89.67%
CDS Percentage 87.91%
Ka/Ks Ratio 0.11121 (Ka = 0.0548, Ks = 0.4925)

Pcsk6 ENSMUSG00000030513 (Mouse)

Gene Details

proprotein convertase subtilisin/kexin type 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053742, Mouse)

Protein Percentage 89.78%
CDS Percentage 85.3%
Ka/Ks Ratio 0.0833 (Ka = 0.0569, Ks = 0.6826)

Pcsk6 ENSRNOG00000011526 (Rat)

Gene Details

proprotein convertase subtilisin/kexin type 6 (Pcsk6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015845, Rat)

Protein Percentage 92.41%
CDS Percentage 87.31%
Ka/Ks Ratio 0.05672 (Ka = 0.0359, Ks = 0.6332)

Genome Location

Sequence Coding sequence

Length: 3096 bp    Location: 3331580..3517697   Strand: +
Raw sequence   
>XM_004852902.1
ATGTGGCATCTTCCCCATCATCGGTTACCGGCATACACAGCCTCTCAGAACTATTCTTCTGTTCGAGGAGTAAATTTCCAGCTCTTCTCTCCCACTGTTACTGCTAGTGCCCCCTTCCCACTCCATTCCCAGCCTTGCTCTGCCAGCGCCCCTGCGGAGGGAGCCCAAGTCCCTCACCCCCTCGCACTTCGGGAGAGCGCTCAGGCAGTGAGCTTGAAGCCCACCCTGGAGTCACGGAATGTTTTCACACAGGAAGGGGGTAAAACGCAACTGGATCCTAGTGGTCTGCTTGGGGACACCGGGCTCCGGCCGCTCGCGCCGCCCGCCTGGCGCTGGCTGCTGCTGCTTGCGCTGCCCACCGCCTGCTCCGCGCCGCCACCGCCGCGCCCCGTCTACACCAACCACTGGGCAGTGCAAGTGCTGGGCGGCCCGGCCGCCGCCGACCGCATGGCCGCCGCGCACGGCTACCTCAACTTGGGCCAGATTGGAAACCTGGAAGATTTCTATCATTTTCATCATAGCAAGACCTTTAAAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGGTGAAATGGCTGCAACAACAAAAAGTTAAACGCAGGGTGAAGAGACAGGTGCGAAGCGACCCTCAGACCCTTTATTTCAACGACCCCATTTGGTCCAACATGTGGTACATGCACTGTGGTGACAAGAACAGTCGCTGCCGGTCAGAAATGAACGTCCAGGCAGCATGGAAGCGGGGCTACACAGGAAAAAACGTGGTGGTCACCATCCTGGATGATGGCATAGAGAGGAATCACCCGGACCTAGCTCCAAATTATGATTCTTATGCAAGTTACGATGTCAACGGAAATGATTATGACCCGTCTCCTCGATATGATGCCAGCAATGAAAATAAACACGGCACACGCTGTGCAGGAGAAGTTGCCGCTTCAGCAAACAACTCGTACTGCATCGTGGGCATAGCATACAATGCAAAAATAGGAGGCATCCGCATGCTGGACGGTGATGTGACAGACGTGGTTGAGGCCAAGTCCCTGGGCATCCGACCCAACTACATCGACATTTACAGCGCCAGCTGGGGGCCAGATGATGACGGGAAGACAGTGGATGGACCCGGCCGACTGGCTAAACAGGCTTTCGAGCACGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCCTCTGGGAATGGTGGGAGAGAAGGGGACTATTGCTCCTGTGATGGCTACACCAACAGCATCTACACCATCTCCGTGAGCAGCACCACTGAGAATGGCTACAAGCCCTGGTACCTGGAGGAGTGCGCCTCCACCCTGGCCACCACCTACAGCAGCGGGGCCTTCTATGAGCGGAAAATTGTCACCACGGATTTGCGACAGCGCTGCACCGATGGCCACACCGGCACCTCAGTCTCAGCTCCCATGGTGGCTGGCATCATCGCCTTGGCTCTAGAAGCAAATAGCCAGTTAACCTGGAGAGACGTCCAGCACTTGCTAGTGAAGACGTCCCGGCCGGCCCACCTGAAGGCGAACGACTGGAAAATGAATGGGGCTGGGCATAAAGTTAGCCATCTCTATGGATTTGGCTTGGTGGATGCAGAAGCTATTGTCCTGGAGGCAAAGAAGTGGACAGCAGTGCCGTCGCAGCACATGTGCATAGCCACCTCGGACAAGAGGCCCAGGAGCATCCCTATAGTACAAGTGCTGCGGACCACGGCCCTGACGAATGCCTGCGCCGACCACTCAGACCAGCGCGTGGTCTACTTGGAGCACGTGGTGGTCCGCATCTCCATCTCGCATCCTCGCCGGGGAGACCTCCAGATCTACCTGGTTTCCCCCTCGGGAACCAAGTCTCAACTTTTGGCAAAGAGATTGCTGGATTTTTCGAATGAAGGATTTACAAACTGGGAGTTTATGACTGTGCACTGCTGGGGAGAAAAGGCTGAGGGGGAATGGACCTTGGAAATCCAAGACCTTCCATCCCAGGTCCGCAACCCGGAAAAACAAGGGAAGCTGAAAGAGTGGACCCTCATTTTGTACGGCACGGCAGAGCACCCGTACCACACCTTCAGTTCCCATCAGTCCCGCTCTCGGATGCTGGAGCTCTCAGTCCCAGAGCCAGAGCCACCCAGGGCTGCTGGGCCGTCCACCCAGGCAGAGGCTCCCGAGGATGAAGACGATTACACAGCTCCTCCCACCCAAGGCTCTCCCAATACTTTACAGACCAGTGTGTGCCATCCGGAGTGTGGTGACAAAGGCTGCGATGGCCCCAACGCAGACCAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAGCGCCAAGACTGGCAGGAAGTGCGTGAGCCAGTGCCCCTTGGGCTACTTCGGGGACAAAGCAGCCAGGCGCTGTCGCAGATGCCACAAGGGGTGTGAGACCTGCTCTGGCAGGGGCCCCACTCAGTGCCTGTCTTGCCGTCGGGGGTTCTATCACCACCAGGAGATGAGCGCCTGCGTGACCCTCTGTCCTGCTGGATTTGACGCGGATGAAAGTCAGAAACACTGCCTTAAATGCCACCCAAGCTGCAAAAAGTGCATGGATGAACCCGAGAAATGTACCATCTGTAAGGAAGGATTCAGCCTTGCACGGGGCAGCTGCATTCCAGACTGTGATCCGGGCACCTACTTTGATTCTGAGCTGATCCGATGTGCAGAATGCCATTCCACCTGCCGAACCTGCGTGGGGCCCAGCAGAGAAGAATGTATTCACTGCGCGAAGAACTTCTACTTCCAAGACTGGAAGTGTGTGCCCACCTGCGGTGAGGGCTACTACCCGGAGGAGATGCCCGGCTTTCCCCACAAAGTGTGTCGAAGGTGTGACGACAACTGCCTGAGCTGTGAAGGCTCCAGCCGCAACTGCAGCAGATGCAAGGCCGGCTTCATGCAGCTGGGAACCTCGTGCATCAGCAACCACACGTGCAGCAACGCTGACGAGACCTTTTGCGAGATGGTGAAGTCCAACCGGCTCTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCACATGCCTCCTGGCTGGGTAG

Related Sequences

XP_004852959.1 Protein

Pcsk6 PREDICTED: proprotein convertase subtilisin/kexin type 6 [Heterocephalus glaber]

Length: 1031 aa      View alignments
>XP_004852959.1
MWHLPHHRLPAYTASQNYSSVRGVNFQLFSPTVTASAPFPLHSQPCSASAPAEGAQVPHPLALRESAQAVSLKPTLESRNVFTQEGGKTQLDPSGLLGDTGLRPLAPPAWRWLLLLALPTACSAPPPPRPVYTNHWAVQVLGGPAAADRMAAAHGYLNLGQIGNLEDFYHFHHSKTFKRSTLSSRGPHTFLRMDPQVKWLQQQKVKRRVKRQVRSDPQTLYFNDPIWSNMWYMHCGDKNSRCRSEMNVQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPRYDASNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGPGRLAKQAFEHGIKKGRQGLGSIFVWASGNGGREGDYCSCDGYTNSIYTISVSSTTENGYKPWYLEECASTLATTYSSGAFYERKIVTTDLRQRCTDGHTGTSVSAPMVAGIIALALEANSQLTWRDVQHLLVKTSRPAHLKANDWKMNGAGHKVSHLYGFGLVDAEAIVLEAKKWTAVPSQHMCIATSDKRPRSIPIVQVLRTTALTNACADHSDQRVVYLEHVVVRISISHPRRGDLQIYLVSPSGTKSQLLAKRLLDFSNEGFTNWEFMTVHCWGEKAEGEWTLEIQDLPSQVRNPEKQGKLKEWTLILYGTAEHPYHTFSSHQSRSRMLELSVPEPEPPRAAGPSTQAEAPEDEDDYTAPPTQGSPNTLQTSVCHPECGDKGCDGPNADQCLNCVHFSLGSAKTGRKCVSQCPLGYFGDKAARRCRRCHKGCETCSGRGPTQCLSCRRGFYHHQEMSACVTLCPAGFDADESQKHCLKCHPSCKKCMDEPEKCTICKEGFSLARGSCIPDCDPGTYFDSELIRCAECHSTCRTCVGPSREECIHCAKNFYFQDWKCVPTCGEGYYPEEMPGFPHKVCRRCDDNCLSCEGSSRNCSRCKAGFMQLGTSCISNHTCSNADETFCEMVKSNRLCERKLFIQFCCRTCLLAG