Sequence details NCBI ID: XM_004852882.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Il16
Gene Name interleukin 16, transcript variant X4
Entrez Gene ID 101710830

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IL16 ENSCPOG00000015489 (Guinea pig)

Gene Details

interleukin 16

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013968, Guinea pig)

Protein Percentage 88.36%
CDS Percentage 88.92%
Ka/Ks Ratio 0.19312 (Ka = 0.0612, Ks = 0.317)

IL16 ENSG00000172349 (Human)

Gene Details

interleukin 16

External Links

Gene Match (Ensembl Protein ID: ENSP00000302935, Human)

Protein Percentage 80.44%
CDS Percentage 82.49%
Ka/Ks Ratio 0.23506 (Ka = 0.1182, Ks = 0.5027)

Il16 ENSMUSG00000001741 (Mouse)

Gene Details

interleukin 16

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001792, Mouse)

Protein Percentage 78.24%
CDS Percentage 79.6%
Ka/Ks Ratio 0.21213 (Ka = 0.1368, Ks = 0.645)

Il16 ENSRNOG00000011680 (Rat)

Gene Details

interleukin 16 (Il16), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016289, Rat)

Protein Percentage 76.08%
CDS Percentage 78.83%
Ka/Ks Ratio 0.21458 (Ka = 0.1454, Ks = 0.6778)

Genome Location

Sequence Coding sequence

Length: 4056 bp    Location: 20684711..20594925   Strand: -
Raw sequence   
>XM_004852882.1
ATGCCCAAGCCCTCCCTGCAGCTCATCCCCAAAGGGACTCATGAAGTGGTGGCTAAGCCCAGTTCAGCTGCTACCCGTCTGCTGAGGGCCAGAGACCAGGAAAGGAAGAAGGGCAGCTTTACTTCCTCTCTGAGGATGGAGCCACACAGCCGTTCTGCAAAGAGCCGAAAATCCACCAAGTTCCGGTCCATCTCCCGTTCCCTGATCCTCTGTAACGCCAGGACAGGGGACGATGGCTCTAGCCCTGATGAGAAGTACCCAGAGCCCTTTGAGATTCCACTGGGCCAGGCCGAGGAGGGGAGTTTCCACTCTGCTGTGCAGCTGGCAGATACATCAGAGGCCATGCTGGCCTCGGAAGCTGCTCAGCTCCAAGCAGCCGGGAGTGACCGAGGCAAGAGCTGTAGGAGAATGTTCTTCATGAAGGAATCATCCACAGCGTCCTCTAGAGAAAAGCCTGGAAAACCAGAAGCACTGAGTAGTAACTTCCTGTTTCCTAAAGGCTGCCACCAGAGGGGCCGCAGTAACTCCACCAGTGTTAACCCCTATTGCACAGGAGAGAGAGACTTTCCCATGAGCAGGAAATCGGCAGCTTCCACGGACAGGCAGCTGAGCTCCCTCTGCAGTGACAAGAAGTCCCTTTCCCAGCAGTTGGACTGGCCTGCAGGAAAGGCTGCGGGCACATCGAGGCCGACTCGGTCGCTGAGCACAGCTCAGCTAGGGCAGTCATTGGCGGGGCTGCAGGCTTCGGTCATCTCAAACATCGTGCTGATGAAGGGCCAGGCCAAGGGCCTGGGCTTCAGCATTGTTGGAGGACAGGACAGCATTTATGGCCCCATTGGGATTTATGTCAAAACCATCTTTGCAGGCGGAGCAGCGGCAGCTGATGGAAGGCTGCAAGAAGGTGATGAAATTCTGGAACTCAACAGTGAATCAATGTCCGGGCTGACACATCAGGGTGCTTTGCAGAAGTTCAAGCAAGCCAAAAAGGGGCTGCTCACGCTCACCGTGCGCACCCGTCTGACGGCGCCCCCCTCCCTGTGTGGCCACCTGTCACCCCCACTGTGCCGCTCCCTGAGCTCCAGCACCTGTGTCGCCAGAGAGAGCAGCAGCCCCTTCACTGTGTACAGCCCCACACCTCCTGCCACCGCCACCAAGCCCAACTACAGAATCATGGTGGAGGTATCCCTGAAGAAAGAGGCCGGTGTGGGCCTGGGGATCGGCCTGTGCAGTGTCCCCTACTTCCAGTGCATCTCAGGGATCTTCGTGCACACGCTCTCACCAGGGTCTGTGGCGCATCTGGATGGACGGCTGCGGTGCGGAGATGAGATTGTGGAAATCAATGACTCCCCTGTGCACTGCATGACACTCAATGAAGTCTATGGGATCCTGAGTCACTGTAATCCTGGTCCTGTCCCCATCATTGTCAGCCGACATCCAGACCCCCAGGTCTCCGAACAGCAACTCAAGGAAGCTGTGACTCAGGCTATGGAGAACATCAAGTTCGGAAAGGAGAGGCACCAGTGGAGTTTGGAAGGTATCAAGAGGCTGGAAAGCAGCTGGCATGGGCGGCCCACCATGGAGAAGGAGCGGGAGAAGACCTCAGCCCCCACATTCCACAGGGCTCAGAGGGCCATGGTCCGATCCAGTAGCGACAGCAGCTACATGTCAGGGTCACCGGGGGGCAGCCCCTGCAGTGGCAGCACTGAGCAGCAGCCCTCCTGCTCTGAAGGCAGCACACACAGCCCAGGCCCAGCCTCAGGGCTGCCCCAGGAAAACCCAGCCCTGCCCAGTGGCCTGGATGGCCACTCGCCTCTGAGGCTGAAGAAGTCCTTTGAGATACTGGTGAGAAAGCCCACATCCTCCAAGCCCAAGCCTCCACCCAGAAAATACTTCAAAAGTGACAGTGAGCCCCAGAAGAATCTGGAAGACAAGGACAACTCTTCAGGTCCTTCTGGGCAGGGCCCACCCACCTGTGGCCAGGAAGGCAGCGAGCTACTGCCACCGCCACTGCCACCGGAAGACACCACGGGGAGAGCCCCCCGCACTGTCGCTGGCTGCTCAGGACCTGGAGTCAGTCCACAGGCCCTGTCTTCCTCAGAGGGCCAGCCAGGGAGGAGAGTCAGCCCAGTGACACCAGGATCCCCCATAAAACCCCGGCTGCTGAAGAGGCAGGCTCGGATGAACTGTAGCTTTGACACCACTGCTGAAGACCCCTGGGTTAGAATTTCTGATTGCATCAAAAACTTATTCAGCCCCATCATGAGTGACAGCCAGGGCCACATGCCACTGCAGCCCAGCGTCAGCCTGGGTGAAGATGGCACACAGAGTCACCCGGATGGGAGTCCGCCCAGGCTGGATACTGCCAATGGTGCACCCAGAGTTTACAAGTCAGCCGACAACAGCTCTGTGAAAAAGGGGCCCCCTGTGGCCCCCAAGCCGGCTTGGTTTCGTCAGAGCTTGAAAGGTCTGAGGACTCGAGCTGCAGACCTGAGATGGCTTCCTGACTCAGGCTCATCCACCCAGCCAACCCCTGCTCCCAGAGAGTCCCCTGGGCCACTCCCCCGGGCCACCTCCTCCATCAAGCAGAGAATCAGCTCCTTTGAAACCTTTGGCTCCTCTCAGCTACCCAATAGAGGAGTCCAGAGACTGAGCCTCCAATCCTCCTCTGGGGAGGCCCCCAAGCCTCCCGGGAAGCAAGAGGGAGGCCGGGCTTCTGGCCTTTTGGTTCGAGGGGCTCAGATTTCTGCTGAGCACAGGCAGCCAGGGCAGGAGCTGGTGTCCCCAAGTTTCCCTGCGGCCTCAGAGGCCGATGCCATGGGTGTGGTTACATCCCCTCCCACAAGGCAGCAACCTGCTCTGAAAACTGTCTCCACTGCCCCTGACCCTCTCACGGGGGTGCTGGGCACACAGAGGGAGGACACTGCGGGCCGCATCCTCAAGATGCCCAGCCAGCGAGCACGGAGCTTCCCCCTGACCCGGACCCAGTCCTGCGAGGCGAGGCTGCTGGACGAGAAGACCAGCAAGCTCTACTCCATCAGCAGCCACGTGTCCTCAGCTGTCATGAAGTCCCTGCTGTGCCTCCCCTCTTGCATCTCCGGCAGCCAGCCAGCCTGCAACCCCAAGGAAGGGGCCACTCCAAAGCCACTGCCCAGTGAAGACTCTGCCGCAGGTAGCTCTGAGTCTATGCCCTTGGACACCGGGTTCTCGCTCAATCTTTCAGAGCTGAGAGAATACACAGAAGGTCTTGCTGAGCCCAAGGAAGCCGAGGATGGGGACCACGGCTCTTCTCAGTCTGGCCAGTCAGTCATCTCCCTGCTGAGCTCAGAAGAGCTGGAAAAACTCATCGAGGAAGTGAGAGTTCTGGATGAAGCAACCTTGAAGCAGCTGGACAGTATCCATGTCACCATCTTGCACAAGGAGGAAGGTGCAGGCCTTGGGTTCAGCTTGGCAGGAGGGGCGGACCTAGAAAACAAGCTGATTACGGTTCACAGAGTGTTTCCAAATGGGCTGGCCTCTCAGGAAGGGACGATTCAGAGGGGCAATGAGGTCCTTTCCATCAACGGCAAGTCCCTCAAAGGGGCCACGCACAGTGATGCCCTGGCCATCCTCCGCCAAGCTCGGGACCCAAGACAAGCTGTGATTGTCACACGGCGGACGCTGGAGGCCACACCTGACCTGAACTTCTCCACCGACCCTGCAGCATCGGCTTCAGCAGCCAGTGACGTTTCTGTGGACTCGACTGCAGTGGCCACGGTCTGCCCAGTGACACTGGAGAAGACATCTGCAGGGCTGGGCTTCAGCCTGGAAGGAGGGAAGGGCTCCTTGCACGGAGACAAGCCTCTCACAGTCAACAGAATTTTCAAAGGGGCAGCCTCAGAACAGAGCGAGACAGTCCAGCCTGGAGATGAAATCCTGCAACTGGCTGGCACTTCTGTGCAGGGCCTCACGAGATTTGAAGCTTGGAATGTCATCAAGGCTCTTCCCGATGGGCCTGTCACGATTGTCCTCAAAAGGAGGAGTCTTCAGGCCAAGGAGACCTCAGCTGCCGAGGCCTAG

Related Sequences

XP_004852939.1 Protein

Il16 PREDICTED: pro-interleukin-16 isoform X4 [Heterocephalus glaber]

Length: 1351 aa      View alignments
>XP_004852939.1
MPKPSLQLIPKGTHEVVAKPSSAATRLLRARDQERKKGSFTSSLRMEPHSRSAKSRKSTKFRSISRSLILCNARTGDDGSSPDEKYPEPFEIPLGQAEEGSFHSAVQLADTSEAMLASEAAQLQAAGSDRGKSCRRMFFMKESSTASSREKPGKPEALSSNFLFPKGCHQRGRSNSTSVNPYCTGERDFPMSRKSAASTDRQLSSLCSDKKSLSQQLDWPAGKAAGTSRPTRSLSTAQLGQSLAGLQASVISNIVLMKGQAKGLGFSIVGGQDSIYGPIGIYVKTIFAGGAAAADGRLQEGDEILELNSESMSGLTHQGALQKFKQAKKGLLTLTVRTRLTAPPSLCGHLSPPLCRSLSSSTCVARESSSPFTVYSPTPPATATKPNYRIMVEVSLKKEAGVGLGIGLCSVPYFQCISGIFVHTLSPGSVAHLDGRLRCGDEIVEINDSPVHCMTLNEVYGILSHCNPGPVPIIVSRHPDPQVSEQQLKEAVTQAMENIKFGKERHQWSLEGIKRLESSWHGRPTMEKEREKTSAPTFHRAQRAMVRSSSDSSYMSGSPGGSPCSGSTEQQPSCSEGSTHSPGPASGLPQENPALPSGLDGHSPLRLKKSFEILVRKPTSSKPKPPPRKYFKSDSEPQKNLEDKDNSSGPSGQGPPTCGQEGSELLPPPLPPEDTTGRAPRTVAGCSGPGVSPQALSSSEGQPGRRVSPVTPGSPIKPRLLKRQARMNCSFDTTAEDPWVRISDCIKNLFSPIMSDSQGHMPLQPSVSLGEDGTQSHPDGSPPRLDTANGAPRVYKSADNSSVKKGPPVAPKPAWFRQSLKGLRTRAADLRWLPDSGSSTQPTPAPRESPGPLPRATSSIKQRISSFETFGSSQLPNRGVQRLSLQSSSGEAPKPPGKQEGGRASGLLVRGAQISAEHRQPGQELVSPSFPAASEADAMGVVTSPPTRQQPALKTVSTAPDPLTGVLGTQREDTAGRILKMPSQRARSFPLTRTQSCEARLLDEKTSKLYSISSHVSSAVMKSLLCLPSCISGSQPACNPKEGATPKPLPSEDSAAGSSESMPLDTGFSLNLSELREYTEGLAEPKEAEDGDHGSSQSGQSVISLLSSEELEKLIEEVRVLDEATLKQLDSIHVTILHKEEGAGLGFSLAGGADLENKLITVHRVFPNGLASQEGTIQRGNEVLSINGKSLKGATHSDALAILRQARDPRQAVIVTRRTLEATPDLNFSTDPAASASAASDVSVDSTAVATVCPVTLEKTSAGLGFSLEGGKGSLHGDKPLTVNRIFKGAASEQSETVQPGDEILQLAGTSVQGLTRFEAWNVIKALPDGPVTIVLKRRSLQAKETSAAEA