Details from NCBI annotation

Gene Symbol Tm6sf1
Gene Name transmembrane 6 superfamily member 1, transcript variant X1
Entrez Gene ID 101707010

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TM6SF1 ENSCPOG00000002868 (Guinea pig)

Gene Details

transmembrane 6 superfamily member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002607, Guinea pig)

Protein Percentage 96.76%
CDS Percentage 95.69%
Ka/Ks Ratio 0.15028 (Ka = 0.0174, Ks = 0.1158)

TM6SF1 ENSG00000136404 (Human)

Gene Details

transmembrane 6 superfamily member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000317000, Human)

Protein Percentage 95.95%
CDS Percentage 92.79%
Ka/Ks Ratio 0.0834 (Ka = 0.0199, Ks = 0.2387)

Tm6sf1 ENSMUSG00000038623 (Mouse)

Gene Details

transmembrane 6 superfamily member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038017, Mouse)

Protein Percentage 94.59%
CDS Percentage 89.19%
Ka/Ks Ratio 0.06249 (Ka = 0.0265, Ks = 0.4235)

Tm6sf1 ENSRNOG00000019662 (Rat)

Gene Details

transmembrane 6 superfamily member 1 (Tm6sf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059206, Rat)

Protein Percentage 93.33%
CDS Percentage 88.02%
Ka/Ks Ratio 0.09168 (Ka = 0.0403, Ks = 0.4393)

Genome Location

Sequence Coding sequence

Length: 1113 bp    Location: 18870085..18895623   Strand: +
>XM_004852870.1
ATGAGCGCCTCGGCGGCCACTGGGGTGTTCGTGTTGTCGCTCTCGGCCATCCCGGTCACCTACATCTTCGACCACCTGGCGGCTCAGCGCGATTCCTGGACAATTGTAGGAGTTGCTGCCCTCATCCTGTTCCTGGTAGCCCTATTGGCTCGAGTTCTCGTCAAAAGAAAGCCACCTCGGGACCCACTGTTCTACGTGTATGCTGTCTTCGGATTTACCAGCGTGGTGAACCTCATCATAGGACTGGAGCAAGATGGCGTCATTGATGGCTTCATGACCCACTACTTGAGAGAGGGTGAACCCTATCTGAACACTGCCTATGGGCACATGATCTGCTACTGGGATGGCTCTGTTCATTATCTGATGTACCTCGTGATGGTGGCAGCCATAGCATGGGAGGAAAGTTACAGAACCATTGGCCTATATTGGGTTGGATCTATTATCATGAGCATTGTTGTTTTTGTGCCTGGAAACATTGTAGGGAAGTATGGAACACGAATATGCCCTGCTTTTTTCTTAAGCATACCATACACTTGTCTTCCTGTCTGGGCAGGTTTCAGAATCTATAATCAGCCATCAGAAAATTATAATTACCCCTCAAAGGTTGTTCAAGAAGCTCAAGCAAAAGACCTGCTGAGAAGACCGTTTGATTTAATGCTAGTCATGTGTCTCCTACTGGCAACCGGATTTTGCCTGTTTAGAGGCTTGATTGCTTTGGACTGCCCAGCTGAGCTCTGCCGATTATATACACAATTTCAAGAGCCCTACCTAAAGGATCCTGCTGCTTATCCTAAAATTCAGATGCTGGCGTATATGTTCTATTCTGTTCCTTACTTTGTGATTGCGCTTTATGGCCTAGTGGTTCCTGGATGCTCCTGGATGCCTGACATAACACTGATACATGCTGGAGGTCTAGCTCAGGCTCAGTTTTCTCACATTGGTGCTTCTCTCCATGCTAGAACTGCTTATGCCTACAGAGTCCCTGAAGAAGCGAAAATCCTATTTTTAGTGTTAAACATAGCATATGGAGTTCTTCCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCGGAGTTCTTCATAAAAACAAAGTCAGATGAAAAGGTGGAATAA

Related Sequences

XP_004852927.1 Protein

Tm6sf1 PREDICTED: transmembrane 6 superfamily member 1 isoform X1 [Heterocephalus glaber]

Length: 370 aa      View alignments
>XP_004852927.1
MSASAATGVFVLSLSAIPVTYIFDHLAAQRDSWTIVGVAALILFLVALLARVLVKRKPPRDPLFYVYAVFGFTSVVNLIIGLEQDGVIDGFMTHYLREGEPYLNTAYGHMICYWDGSVHYLMYLVMVAAIAWEESYRTIGLYWVGSIIMSIVVFVPGNIVGKYGTRICPAFFLSIPYTCLPVWAGFRIYNQPSENYNYPSKVVQEAQAKDLLRRPFDLMLVMCLLLATGFCLFRGLIALDCPAELCRLYTQFQEPYLKDPAAYPKIQMLAYMFYSVPYFVIALYGLVVPGCSWMPDITLIHAGGLAQAQFSHIGASLHARTAYAYRVPEEAKILFLVLNIAYGVLPQLLAYRCIYKPEFFIKTKSDEKVE