Sequence details NCBI ID: XM_004852859.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Whamm
Gene Name WAS protein homolog associated with actin, golgi membranes and microtubules
Entrez Gene ID 101702428

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WHAMM ENSCPOG00000014684 (Guinea pig)

Gene Details

WAS protein homolog associated with actin, golgi membranes and microtubules

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013232, Guinea pig)

Protein Percentage 71.17%
CDS Percentage 79.64%
Ka/Ks Ratio 0.44828 (Ka = 0.1912, Ks = 0.4266)

WHAMM ENSG00000156232 (Human)

Gene Details

WAS protein homolog associated with actin, golgi membranes and microtubules

External Links

Gene Match (Ensembl Protein ID: ENSP00000286760, Human)

Protein Percentage 72.81%
CDS Percentage 78.95%
Ka/Ks Ratio 0.3459 (Ka = 0.1782, Ks = 0.5151)

Whamm ENSMUSG00000045795 (Mouse)

Gene Details

WAS protein homolog associated with actin, golgi membranes and microtubules

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128881, Mouse)

Protein Percentage 66.41%
CDS Percentage 75.05%
Ka/Ks Ratio 0.38247 (Ka = 0.2355, Ks = 0.6158)

Whamm ENSRNOG00000028113 (Rat)

Gene Details

WAS protein homolog associated with actin, golgi membranes and microtubules (Whamm), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060843, Rat)

Protein Percentage 66.49%
CDS Percentage 74.99%
Ka/Ks Ratio 0.382 (Ka = 0.237, Ks = 0.6204)

Genome Location

Sequence Coding sequence

Length: 2343 bp    Location: 18600592..18622116   Strand: +
Raw sequence   
>XM_004852859.1
ATGGAGGACGAGCAGCCGGACAGCCTGGACGGCTGGGTGCCGCTGCGCGAGGACCTCTTCGCCGAGCCCGAGCGGCGCCGGCTGCGCTTCCTGGTGGCCTGGAACGAGGCGGAGCGACAGTTCGCGGTGACCTGCCACGACCGCTCTGCGGCAGGCCGGGCGCGGGACTGGGCCGGGCTGCTCTCGGCCGCCGGGCTCCGCGGCGCGCACCGGCAACTGGCGGCGCTGGGCCCGGGCCTGGAGCGCCTCTTCCCGGAGCTGCCGGCCGGGTTGGCCGCGCCGCGCGGCGTGGGGGATGTGCTGTGGGAGCTCGTGTGGCCCGCGCGGCCCGCGGCCCTCAGCGAGGCGGCGCTGCGCGAGCTGTGCGCCGGGCTGGAGCGCTACCTGGACGCGGCGGCCGAGGCCTGCGGCGGGGACACCGTGCGTGACGCGCTCTTCCCGGGCGCCGTAGCCGCGGATGACAGTGAGAGCCTGAGCGCGTTCCGGACGCGCAAGCTGCGCGCGCGCAAGGCCGAGGCGAGCGCGCGGCTGCGGCAGGTTCTTCAAGGGCATGGAAAAACCAACATCATGGTAGCATTAATGAAACTTTATCAAGAGGAAGATGAAGCATATCAGGAATTAGTTCTTACTGCAACTGTCTTTTTCCAGTATTTACTGAAGCCACTTAGGGATAGGCGAGAACGTGCAACTTCAAGTAAGCTTAATATTTTGAAGTCCCTGGATGAAGATGAGCTGGGTCCGCAGAGGGTGGCTACCCTGCAGAAGGAAGCCCAAAAATGGACCAGCCAGGCTGAAGAAGCTGTTGCCTCTATTCAAGATATCACTGTGGATTATTTCAAGGAGACAGTGAAGGCATTAACAGAAATGCAGAAACAAATGGAAGAGGATAGCAAGAGATTTGGCCAGGCGGCCTGGGCCACTGCCGCGCCCAGATTAGAGAAACTCAAGCTCATGGTTGCTCGAGAGACCCTGCAACTCATGAGAGCCAGAGAGTTGTGTTTAAACCACAGAAGAGCTGAAATTCAGAGAAAGATGGAAGAGCTTCCGGAACAAGAAAAAAAAACCATGCATGTTGTAGATGAATTAGAAATACAGTATTATGAAATTCAGTTGGAACTGTATGAGGTTAAGTTTGAGATATTAAAAAATGAAGAAATACTTCTTATTACACAGTTGGACTCTGTTAAAAGGCTTATAAAAGAGAAACAGGATGAAGTTGTCTATTACGATACGTGTGAAAGCCCAGAAGAACTTCAGGTCCTTAGTTGGGCTGTGGAGCTGCGGGACCGTGAGAACGCGGAGATGAAAGAGCTCACCCTACAGCGCCGGCAGCTGGAGATGCAACGGGGCAGAATCTGCACCAGGAGAGCCCGTCTCAGGAACAGAAAGGATCAATGCAAAGAAAATCATCACCTCCGATTGCAACAGGCCGAAAAAAATGTTCAATATTTGCATGAGCATCACAGCATTCAGATGAAAAGAGACAAAATAAAAGAAGAGGAACAGAAGAAAAAAGAATGGATAAACCAAGAACGCCAGAAAACCCTCCAGCGATTAAGAGCATATAAAGCGAAATGTCCAGCTCGGTCTGCGCTACAAACCTCTGCCTCCGAGCTTGCGGCCCCAAACTTGCCAGGTGACCTTTCCCAGCAGCTGCCCTCGCCAGCTTCTCAGCCAGGGACAGCAATTCTCCCACCATCCCGGAAAACCAGACGTGCTCCTCCCTTCAGTGAAGTTAGCCATATGGAGTGTCAAGAATGTCCTGGAAACATCCCTGTCCAGATATTTGTCCCAGCTGGGCACCAGACACACTCCAGATCCAGTGAGGAACTGTCACCACCACCACAGCCTCCCTCTCCGCCTCCGCCTCCCCCTCTTCCTCCACCCCCACCCCCACTGCCACCTCTCTCTGCTCGGCCCTCCTATTCCCAAGCTGCCATTCATCAGAACCCAGGCCCCAGGACTTCAGTGGACGATGACCAGCCACATCCGTTGGTGTGTGAATCCACTGCTGAAAACTCGCGTGGCTCCTTGGAAATTCTTTCAGGCCCAGGATCTATGGACGAAGTGCTGGCCTCATTAAGGCACGGCAGAACTTGCCTCCAGAAAACAGAAGTGCCCACACTGCCCCGACCCCACGCCTCTGTCAATGAGGACATCCTGGTGGCCATCAGGCAGGGGGTCAAGCTGAAGAAAGTCCATCAGGACCCAGACCCGGGCCGCAGCACCAAGCCAGCCAGTGACCTGGAGAGAAGCATCAAGGCAGCTCTGCAGAGAATCAAGCGAGTGTCTGCCGACTCAGAGGACAGTGACGAGCAGAACCCCGGCCAATGGGACAGTTAA

Related Sequences

XP_004852916.1 Protein

Whamm PREDICTED: WASP homolog-associated protein with actin, membranes and microtubules [Heterocephalus glaber]

Length: 780 aa      View alignments
>XP_004852916.1
MEDEQPDSLDGWVPLREDLFAEPERRRLRFLVAWNEAERQFAVTCHDRSAAGRARDWAGLLSAAGLRGAHRQLAALGPGLERLFPELPAGLAAPRGVGDVLWELVWPARPAALSEAALRELCAGLERYLDAAAEACGGDTVRDALFPGAVAADDSESLSAFRTRKLRARKAEASARLRQVLQGHGKTNIMVALMKLYQEEDEAYQELVLTATVFFQYLLKPLRDRRERATSSKLNILKSLDEDELGPQRVATLQKEAQKWTSQAEEAVASIQDITVDYFKETVKALTEMQKQMEEDSKRFGQAAWATAAPRLEKLKLMVARETLQLMRARELCLNHRRAEIQRKMEELPEQEKKTMHVVDELEIQYYEIQLELYEVKFEILKNEEILLITQLDSVKRLIKEKQDEVVYYDTCESPEELQVLSWAVELRDRENAEMKELTLQRRQLEMQRGRICTRRARLRNRKDQCKENHHLRLQQAEKNVQYLHEHHSIQMKRDKIKEEEQKKKEWINQERQKTLQRLRAYKAKCPARSALQTSASELAAPNLPGDLSQQLPSPASQPGTAILPPSRKTRRAPPFSEVSHMECQECPGNIPVQIFVPAGHQTHSRSSEELSPPPQPPSPPPPPPLPPPPPPLPPLSARPSYSQAAIHQNPGPRTSVDDDQPHPLVCESTAENSRGSLEILSGPGSMDEVLASLRHGRTCLQKTEVPTLPRPHASVNEDILVAIRQGVKLKKVHQDPDPGRSTKPASDLERSIKAALQRIKRVSADSEDSDEQNPGQWDS