Details from NCBI annotation

Gene Symbol Vps33b
Gene Name vacuolar protein sorting 33 homolog B (yeast), transcript variant X2
Entrez Gene ID 101714295

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPS33B ENSCPOG00000003707 (Guinea pig)

Gene Details

vacuolar protein sorting 33 homolog B (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003347, Guinea pig)

Protein Percentage 97.41%
CDS Percentage 93.57%
Ka/Ks Ratio 0.0483 (Ka = 0.0127, Ks = 0.2632)

VPS33B ENSG00000184056 (Human)

Gene Details

vacuolar protein sorting 33 homolog B (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000327650, Human)

Protein Percentage 95.62%
CDS Percentage 92.22%
Ka/Ks Ratio 0.0671 (Ka = 0.0208, Ks = 0.3106)

Vps33b ENSMUSG00000030534 (Mouse)

Gene Details

vacuolar protein sorting 33B (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032749, Mouse)

Protein Percentage 94.98%
CDS Percentage 90.55%
Ka/Ks Ratio 0.05876 (Ka = 0.0239, Ks = 0.4064)

Vps33b ENSRNOG00000013149 (Rat)

Gene Details

vacuolar protein sorting 33 homolog B (yeast) (Vps33b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017862, Rat)

Protein Percentage 94.81%
CDS Percentage 89.79%
Ka/Ks Ratio 0.05978 (Ka = 0.0265, Ks = 0.4425)

Genome Location

Sequence Coding sequence

Length: 1854 bp    Location: 17244364..17264248   Strand: +
>XM_004852798.1
ATGGCTTTTCCCCATCGGCCGGACGCCCCTGAGCTGCCTGACTTCTCCATGCTCAAGAGGCTGGCTCGAGACCAGCTCATCTATCTGCTGGAGCAGCTTCCTGGAAAAAAGGATTTGTTCATTGAGCCAGATCTCATGAGCCCTTTGGATCGGATTGCCAATGTCTCCATCCTGAAGCAACATGAAGTGGACAAGCTGTACAAGGTGGAGAACAAGCTAGTGCTCAGCTCCAATGAACAGTTGTGCTTCCTGGTCAGACCCCGCATCAAGAATATGTACTACATTGCCAATCTCGTCAAAGCTGACAAATTGGCTGGCCGAACTCGAAAATACAAAGTGATCTTCAGCCCTCAGAAGTTTTATGCATGTGAGATGGTGCTTGAGGAAGAGGGGATCTATGGAGACGTGAGCTGTGATGAATGGGCCTTCTCTCTGCTGCCTCTTGATGTGGATCTGCTGAGCATGGAGCTGCCAGAATTTTTCAGGGACTATTTCCTGGAAGGAGATCAGCGTTGGATCAACACTGTGACTCAGGCCTTGCACCTTCTCAGCACTCTCTATGGACCCTTTCCAAACAGCTATGGGATTGGCAGGTGTGCCAAGATGTCATATGAATTGTGGCGGAAACTGGAGGAGGAGGAGGAGAGTGAAACCAAAAGCCGAAGGCCAGAGATCGGACATATCTTTCTCCTCGATAGAGACATGGACTTCGTGACAGCACTTTGCTCCCAAGTGGTTTACGAGGGCCTGGTAGACGATACCTTCCGCATCAAGTGTGGGAGTGTTGACTTTGGCCCGGAAGTCACATCTTCTGAGAAGAGCCTGAAGGTGCTGCTTAATGCTGATGACAAGGTGTTCAGTGAGATTCGCAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCACGGAACCTGCAGTCCCAGTATGATCGCCGGAGAGGCATGGACATCAAGCAGATGAAGAACTTTGTGTCTCAGGAGCTCAAGGGACTGAAACAGGAGCACCGCCTGCTGAGTCTCCATATTGGGGCCTGTGAATCAATCATGAAGAAGAAAACGAAGCAGGACTTCCAGGAGCTGATCAAGACCGAGCATGCACTGCTGGAAGGTTTCAACATCCGGGAGAGTACCAGCTACATAGAAGAGCACATAGACCGGCAGGTGTCACCCATAGAAAGCCTTCGCCTCATGTGCCTCCTGTCCATCACTGAGAATGGTTTGATCCCCAAGGATTACCGATCTCTGAAAACACAGTATCTGCAGAGCTATGGCCCTGAGCACCTGCTGACCTTCTCCAATCTGCGGCGAGCAGGGCTCCTAACAGAGCAGGCTCCGGGGGACACACTCACAGCGATGGAGAGTAAAGTGAGCAAGCTGGTGACTGACAAGGCTGCAGGGAAGATTACCGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATTAGCAAAAAGCTGAATTTGATCCCCCGTGTGGATGGCGAGTATGACCTGAAAGTGCCCCGCGACATGGCATATGTCTTCAGTGGTGCTTACGTGCCCCTGAGCTGCCGAATCATCGAGCAGGTGCTGGAGCGGCGGAGTTGGCAGGGCCTTGAGGAGGTGGTGCGGCTGCTCAACTGCAGCGAGTACTCATTTGCAGACATGACCAAGGAAGACAGGGCTTCCAGCGAGTCCCTGCGCCTCATCTTGGTGGTGTTCTTGGGTGGGTGCACATTCTCAGAGATCTCAGCCCTGCGCTTCCTAGGCAGAGAGAAAGGGTACAGGTTCATTTTTCTGACAACAGCTGTCACAAACAGTGCTCGCCTAATGGAGGCCATGAGTGAAGTGAAAACCTGA

Related Sequences

XP_004852855.1 Protein

Vps33b PREDICTED: vacuolar protein sorting-associated protein 33B isoform X2 [Heterocephalus glaber]

Length: 617 aa      View alignments
>XP_004852855.1
MAFPHRPDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEPDLMSPLDRIANVSILKQHEVDKLYKVENKLVLSSNEQLCFLVRPRIKNMYYIANLVKADKLAGRTRKYKVIFSPQKFYACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVTQALHLLSTLYGPFPNSYGIGRCAKMSYELWRKLEEEEESETKSRRPEIGHIFLLDRDMDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSEKSLKVLLNADDKVFSEIRNEHFSNVFGFLSQKARNLQSQYDRRRGMDIKQMKNFVSQELKGLKQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLEGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDYRSLKTQYLQSYGPEHLLTFSNLRRAGLLTEQAPGDTLTAMESKVSKLVTDKAAGKITDAFSSLAKRSNFRAISKKLNLIPRVDGEYDLKVPRDMAYVFSGAYVPLSCRIIEQVLERRSWQGLEEVVRLLNCSEYSFADMTKEDRASSESLRLILVVFLGGCTFSEISALRFLGREKGYRFIFLTTAVTNSARLMEAMSEVKT