Details from NCBI annotation

Gene Symbol Plin1
Gene Name perilipin 1, transcript variant X3
Entrez Gene ID 101704225

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PLIN1 ENSCPOG00000009674 (Guinea pig)

Gene Details

perilipin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008680, Guinea pig)

Protein Percentage 86.38%
CDS Percentage 87.35%
Ka/Ks Ratio 0.1857 (Ka = 0.0783, Ks = 0.4218)

PLIN1 ENSG00000166819 (Human)

Gene Details

perilipin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000300055, Human)

Protein Percentage 81.36%
CDS Percentage 84.6%
Ka/Ks Ratio 0.18396 (Ka = 0.1019, Ks = 0.5538)

Plin1 ENSMUSG00000030546 (Mouse)

Gene Details

perilipin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032762, Mouse)

Protein Percentage 83.69%
CDS Percentage 83.17%
Ka/Ks Ratio 0.12215 (Ka = 0.0913, Ks = 0.7475)

Plin1 ENSRNOG00000015086 (Rat)

Gene Details

perilipin 1 (Plin1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061809, Rat)

Protein Percentage 82.78%
CDS Percentage 81.34%
Ka/Ks Ratio 0.13389 (Ka = 0.105, Ks = 0.784)

Genome Location

Sequence Coding sequence

Length: 1551 bp    Location: 16753257..16737863   Strand: -
>XM_004852772.1
ATGGCAGTGAACAAGGGCCCGATGCTGCTGGATGGAGACCTTCCTGAGCAGGAGAACGTGCTGCAGCGAGTCCTGCAGCTGCCGGTGGTGAGCGGCACGTGTGAGTGCTTCCAGAAGACCTACACCAGCACCAAGGAAGCCCACCCCCTGGTGGCCTCTGTGTGCAATGCCTATGAGAAGGGCGTTCAGGGTGCCAGCAGCCTGGCCGCCTGGGGCATGGAGCCAGTGGTCCGCAGGCTGTCCACCCAGTTCACAGCTGCCAATGAGCTGGCCTGCCGGGGTCTGGACCACCTGGAGGAAAAGATCCCAGCCCTCCAATACCCTCCTGAAAAGATCGCCTCAGAGCTAAAGGACACCATTTCCAGCCGCCTTCGCAGTGCCCGGAACAGCATCAGTGTGCCCATTGCAAGCACATCAGACAAGGTCCTGGGGGCCACACTGGCCAGCTGCGAGCTGGCCTGGGGGGTGGCCAAGGAGTCTGCAGAGTATGCTGCCAACACCCGAGCTGGCCGGCTGGCTTCTGGAGGGGCTGATCTGGCCCTGAGCGGCATTGAGAAGGTGGTGGAGCTCCTCCTCCCTCCAGGCAAGGAGGAGTCAGCCCCTGTTCCTGGACGCCAGCAGACTCAGAAACCTCCCAAGGCCAAGCCGAGCCTCACGCGTAGGGTTGGGACCCTGGCCAACACCCTCTCCCAACACGCCATGCAGACCACATCCTGGGCGCTGAAGCAGGGCCACTCCCTGGCCATGTGGATCCCGGGGGTGGCACCCCTAAGCAGCCTGGCCCAGTGGGGTGCATCAGCCACCATGCAGGTAGTGTCCCGGCGGCGACAGAGCGAGGTGCGAGTGTCCTGGCTGCACAACCTCGCTGCTATACAGGGTGAGGAACATGATGACCAGACAGACACAGAGGCTGAGGAGTCGGAGGAGGAGGAATCCGAGACCGAGGAGAATATGCTCAGTGAGGTGGCGGACCTGCCAGGCCCGAAAGGCCTCCTGGGCACTGTGGCGTATGCCCTACAGAAGACGCTCCAGGGTACCATCTCAGCTGTGACATGGGCACCCAAGGCTGTGCTGGGCACGGCAGGGAGGATGCTGCACCTCACAGCAGCCCCGGGTGTCACCCCAATCAAGGGGCGAGCCATGTCCCTGTCGGATGCTCTGAAGGGTGTCACTGACAACGTGGTGGACACAGTGGTGCACTACGTGCCGCTCCCCAGGCTGTCGTTGATGGAGCCCGAGAGCGAATTCCGGGACATCGAGCACCCGCCGGCCGAGGCTGAACGCCGGGAGGCGGAGCGCAAGGGTTCGGGGCCGAAGCCCGCCAGCCCGGAGTCGGCACCACACCCTGTGCAGCACCGCGGAAGCATGCGTGGAGCACGCAGCCTCGACCAAGGAGACCCCGGGGAGATGCCCCCCGCGCCGCGCTCGGGCTTCCTGGCCACGCCCCGCGAGAAGCCCGCGCGCAGGGTCAGCGACAGCTTCTTCCGGCCCAGTGTCATGGAGCCCATCCTAGGCCGCGCGCAGTACAGCCAGCTGCGCAAGAAGAGCTGA

Related Sequences

XP_004852829.1 Protein

Plin1 PREDICTED: perilipin-1 isoform X3 [Heterocephalus glaber]

Length: 516 aa      View alignments
>XP_004852829.1
MAVNKGPMLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGVQGASSLAAWGMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTISSRLRSARNSISVPIASTSDKVLGATLASCELAWGVAKESAEYAANTRAGRLASGGADLALSGIEKVVELLLPPGKEESAPVPGRQQTQKPPKAKPSLTRRVGTLANTLSQHAMQTTSWALKQGHSLAMWIPGVAPLSSLAQWGASATMQVVSRRRQSEVRVSWLHNLAAIQGEEHDDQTDTEAEESEEEESETEENMLSEVADLPGPKGLLGTVAYALQKTLQGTISAVTWAPKAVLGTAGRMLHLTAAPGVTPIKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDIEHPPAEAERREAERKGSGPKPASPESAPHPVQHRGSMRGARSLDQGDPGEMPPAPRSGFLATPREKPARRVSDSFFRPSVMEPILGRAQYSQLRKKS