Sequence details NCBI ID: XM_004852766.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ticrr
Gene Name TOPBP1-interacting checkpoint and replication regulator, transcript variant X1
Entrez Gene ID 101703037

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TICRR ENSCPOG00000015362 (Guinea pig)

Gene Details

TOPBP1-interacting checkpoint and replication regulator

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013848, Guinea pig)

Protein Percentage 81.84%
CDS Percentage 87.36%
Ka/Ks Ratio 0.4599 (Ka = 0.1075, Ks = 0.2338)

TICRR ENSG00000140534 (Human)

Gene Details

TOPBP1-interacting checkpoint and replication regulator

External Links

Gene Match (Ensembl Protein ID: ENSP00000268138, Human)

Protein Percentage 72.94%
CDS Percentage 80.64%
Ka/Ks Ratio 0.4414 (Ka = 0.1753, Ks = 0.3971)

Ticrr ENSMUSG00000046591 (Mouse)

Gene Details

TOPBP1-interacting checkpoint and replication regulator

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041377, Mouse)

Protein Percentage 67.43%
CDS Percentage 75.74%
Ka/Ks Ratio 0.40414 (Ka = 0.2253, Ks = 0.5576)

Ticrr ENSRNOG00000015520 (Rat)

Gene Details

Protein Ticrr

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029053, Rat)

Protein Percentage 66.94%
CDS Percentage 75.3%
Ka/Ks Ratio 0.38859 (Ka = 0.2273, Ks = 0.585)

Genome Location

Sequence Coding sequence

Length: 5679 bp    Location: 16670390..16716281   Strand: +
Raw sequence   
>XM_004852766.1
ATGGCCTGCTGTCACAAAGTGATGCTGCTTCTCGACACGGCGGGTGGTGCCGTTCTCCAGAGCTCGGCCCGGCGGGCCGCCCTGCGCCTCCTCACCTACCTGGGCTGCCGGTTCGGCCTGGCTAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCCCAGGGCGCGCGGGGCCGGCCCTCCCGCACGTCCGACTTCCGCGAGCTGGGGACGCTCTCCTGGGACTACTTCGAGGAGGAGCTGGAGGCCCGGCTTGGGGGTCTCGCGCCCGGAGCCCATCTGCCCGGGCCGGCCGCCCGGGCCAGCCACATGCACAGCGCCCTGATGGAGACGTTGCTAGACTACCAGTGGGACCGGCCCGAGATCACGTCGCCCACGAAGCCGATCCTGAGGAGCAGCGGCCGGAGACTCCTGGATGCCGAGAGCGAGGCCAAGGAGGCCGAGTCCGCGCTCGGGGGCCTGGTGAACGCCGTCTTCCTCCTAGCGCCCTGTCCGCACTCGCAGAGGGAGCTGGTGCAGTTCGTGTCGGGGTGCGAGGCCCAGGCCCAGCGCCTGCCGCCCACCCCCAAGCAGGTGATGGAGAAGTTGCTGCCCAGGAGAGTCCAGGAGGTCATGGTCGCCCGAAAAATCACCTTCTTCTGGGTGGACACCACCGAGTGGTCCAAGCTGTGGGAATCCCCAGACCATGTTGGGTACTGGACAATTTGTGAACTGCTCCACGAAGGAGGAGGCACTGTCTTGCCACCTGAAACTTTTAACTGGGGTGTTAGTAAAGCTGGGAAGATGATACTTGGCGGTGAAGGAAAGATGTCAAGTGACTCTCACCTCTCTCCGTGGATTTCAACTTTGCCAACTGATGCCACTTTAAACTGTTTGCTCTATAATTCCGCTGTGTATGAATCCTCATTTCCACGGGTGGAGGGAACATTATTTCTCCCTGTTAAAGGCAAAGAGATTCAAGAAACATGGGCAATCACCCTAGAGCCCTTGGCCATGCATCAGAGACACTTTCAGAACCCAGTCAGAATTTTTCTAAAAGGCTCAATGGTCCAGTGGTCTCTCCCGATGAGTGACACTTTGGGCACCAATAGCTGGATGCTACAAAGTCCAGAGGAGAACAGATTAACTCAAGGGCAATTATTTCAGCAGCTGGCTAGCAGTCTGACTGCTGAAGAGTTGCATCTGGTTGCCAGTGTGGACCTGGGTGAAGGGTGGGCCCCTGTCACTGGAGTCCTTTCCCCGCTCTCTGCCAGTGCTATGATTCTCACTGTGCTCCACGCCAAGGAGGCTGAATTCCAAGGACATTTTCTCCATACAGTTGTGGCTGGAAGCCCCCAGGATACAGCGTGCCTTTTCTCAGATGTTACGGATGGTGTGCTGAATCAGATTCATCATTTATTTGAAGATGCTGCTGCTTCTGCTCCCCCTGTTCCAGAGTGGGCTCAGCAGGAGCTCGACCGCACAACTCCCTGGAGCCCAGCTGTCCTGGAGAAGTGGTTTCCTTTCTCTAACATCAGTGGCGCCAGTTCAAATTTGATGGAGTCATTTTGGTCACTACAGGATGCCTCAGCTAATAAGGAACAGTCTTCCAAAACTGAGAGTGAATTAACACATTGCCTGTCTGAGTTCTACCAGAGAAAATCTCGGGAAGAATCTACTGTAGCTAACCAAGAAGACAGCAAAAAGAAACGAGGCATCCCTCGCACTCCAGTGAGGCAGAAGATGAATACCATGTGCCGTTCCCTAAAGATGTTGAATGTTGCAAGGCTGAATGTAAAGGCTCAGAAGTTACACCCAGATGGCAGCCCTGATGTGGCTGGGGAGAAAGTGATCCAAAAGACAGTCAGTGGAAGAACAACAGATAAACTGGAAGACAGAGGAAGATCATTAAGAAGCTCTAAACCAAAAGATTTTAAAACTGAGGAGGAGCTACTGTCCTACATACATGAAAATTACCAAAAGGCTGTGGCCACAGGGGAAGTCACTTTATATTCATGTGCTCAGAACATGATCTCAACTATTAAAGTGTTCCTAAAATTGAAAGGCGCCAAGGAAGTAGAAGTGAACTGCCTGAATCACATAAAAAGTAACCTCTTAAAAGCTAGCAAAAATCTTCGACAGAATCTAGGAAAAAAACTGGATAAGGAAGACAAAGTCAGAGATTGCCAGCTTCAGGTGTTTCTTCGTCTGGAGATGTGTCTACAGTGCCCTTCCATACTAGAAAACCCAGAGGAGATGGAGCAAGTAGTGGAAGAGGTGACAGCTTTGCTTCGCATAGTGTGTCTAACTGAGGATTCAGCATACCTAGCAAATTTTCTGGAAGAGATTTTGAAATTGTACATTGACTCCATCCCAGAGACACTTGGGAAGCTTTACAACAGCCTTGGGTTTGAGATTCCTCAGAAGCTGGCTGGCATCCTTCCCACAGACTTTTTTAGTGATGACTCCATGACTCAAGAGAGTAAATCCCCACTTCTTTCCGTGCCTCTTCCATCAAGTGCTCACAGATCAGTTTCAGGCAGCACTGAAGCTGACCAGCTGGAGGAGCTCCGGACCAGATCAGCCAAGAAGAGGAGGAAAAATGCACTAATAAGACATAAAAGCCTTGCAGAAGTTTCACAGAATCTTCGACAAATTGAAATTCCCAAAGTATCCAAGAGAGCTACAAAAAATGAGAGCTCTCACCCTGCCCCTCAGCAGCCTGCAGTCCCAGCGAAAGGCACAGCACAAGAAGTGACCAAAGTTCGAAGAAATCTCTTCAACCAGGAAATGATTTCTCCTTCAAAGAGATCACTAAAGCGGGGCCTGCCTAGAAGTCATTCTGTGTCTGCCTTGGAAGGTCTGGACCATAAACGTGACAACTTCAAGAAGGCCAAAAGTACTACATGTCAGGGTTATCACAAGCTGCTGACTAAGAGTGTGGCTGAGACTCCAGTCCATAAGCAAATCTCGAGGAGGCTCCTTCACAGACAAATCAAGGGCAGGTCCTCTGATCCTGGTCCTGACATCGATGTTGTTGATGAGTCCCCTGAAAAAGGAGATGAAATAAGTTTGAGGCGAAGTCCTCGAATCAAGCAATTACCATTTAGCCGAAGAAATTCTGGTTCCTTCTATTCTGTGTCTCAGCCAGCGTTGAGAAGTATGCAAAGAGTCCGTTCATTCCAGCAAAACAAGTCAGACCAAAGAGAAAATTCTCCGATCCAAAGTATTCAGTCTCCCAAGAGGCTTCTTTTTGGGGCAGTGTCTGAGATGGTCAGCCCCTCAGGGAAGGGTTCGGCCCGAATTAAAAGACTGTCAAGAAGCAAGCTGAGTTCTGAGATCCCTCCAGTTTACCAGACTCCTAAGAAGAGTTACCGAAAATCTCCAAGCTTTCCTAAGACAACGCCAAGAAGGTTCCCACTGCAGACTGCACCATGCACTCTGGAGAGGCCACTGTGCCCCACTACAGAAGTGACTCCCACAGAGTCTGCCATGGCTGAGAAGGCCCCACAGAACCCCTCCTCATCCAGCCACTGCTCACAGTTGGCGTCAAGAGCTACACTTCAGGAAGGACCGTCCCGGGCAGAAGGGGGCTCTCCTCTTGACATAGATACCCCAAGAACACCCACCAGGCCAGGTGCTCAGCCACCCGGGTTCTTGCTGAACCATGCATGGCCACGTCTGATGAATTCCAGTCCAGAAAGCCCCAGCTGTCCGACATCCCCGATTCCCTCCATTCCCCAGCCCCAGAGTGAGTGTGTGACCTCCACGAAGCACTGCCTCAGGACACCCCCGAAGGCAGCAGCCCTCCTGGGCCCACCTCAGGGTCAAAAGTGCCAGCAGCCCCTTCTCCCCAGACTTTCTCAGGCAGAGGTACCAGCACAGACACTAAAGGATAAAGCTGTCCGGACCTCCAAGAGACCCAGGAACACAACTGTGACTTCTTCCCCACCTGGTGCTCCAGAGAAGTGGGATGTTCCCAAGAGCCCACTTAGGAGCCCATCCACAGCACCCCCTGGCCCTGGAGGACTGGATCAGAAAGAGCACCAGGCGTCACCCAGCAGGGCCACATCTCCCTCCTGTGCTGGTCCCTCAACTCCCCCCACAGTCCCACAGAGAGTCGCGTCTGTCACTGTCCCCCCTCCACCACCGTCAAAACTTGAGAGACAGTATAGAAAGACCTCAAACCCTGAACAAGGCTCTCTGGAATGCCAACCTGGGCCGCCCTCTGTTGTGCTTGGAGTTGCTACTGCTACCAGCCCAGCTGCCACCACAGGTTCTAAAAAGGACCGAAAGGAAGGGAGCCTCTCTCCACAGTCCTCTCCTGAAAGACAGAGGCACCTGGGTGCTGGTGTCAGCAGTGACTGTCATGGATCCTCCCCTCTGCTCGTTGCAAGTGACACAGACTACCTAACTCTTCTTGAAGCCAAACACTGGGGTGATGGGAGCCATGCAGTGAGAGGTGGCATCTCACCAGGGGATGAAGACACAGGGCTAAGGACAGCAGATCATGCCTGGGAGCCACCCTCCATACTTGATGCCAGAACTTCGCCCCCTGCTTCTTGCTCTGGGCCTGGCTCTCCCATGACAGTGTCCTACACCCTGTGCTGTCCTCCAGATGGATGGCAGCACCAGGCTGTGACACAGCTGGAGAGCCCGAGAGCTCTGGTGAGGCCTCCGCAGGTCCCCAGCAGTCCGCACACCTATGAGGTGGAGCTGGAGATGCAGGCCTCTGGCCTGCCCAAGCTTCGGATTAAGAAGGTAGACTCCAGTGCACTGGCTGAAGCTGAGGGTCTGGGTGAGGAGGGCTCCCTCCCTGGACTCAGCATGCCCAGGATCAGCAGAGCCACCAGCAAGCCCGAGGCTACTTACATGTCACCTCCTTGCCTCCGCCCCTCGCATAGCACCCCTGGCAAGGGGCAGACCTACATCTGCCAGTCCTGCACCCCAACCCACTGTCCATCCAGTACCCCCTCTCCATTTCAGACAGATGTTGGGATTCCCTGGACACCATCCCCTAAGCACAGTGGGAAGACCACTCCCGACACCATTAAAGACTGGCCCCGGAGGAAGAGGGCAGTGGACTGTAGCAATGGGCTCTCCTCGGGGAGAAGCGAGGCGGGCACAGACCCTGAGCCCCAGGCCAAGGAGCAAGGCCTTGAACTCAGCCTCCACAAGACTGCCATCTTGGAGGACTTTGAGCTTGAGGGGGTGTGTCAGCTCCCAGACCAGTCGCCTCCTGGGGACAGTGTCCCCAAGGCCGAGGAAGCCTTCTCATGGGGACAGTTTGGGTTGGGTTCCAGAAAGAGACATTTGTTTGCCAAGGAAGAAGGTGAGTGTGGAGCCAAAAGAGTGTATGAAGCCCCAAGGGAAGACGCAAACATGAGGAACCAGGAAAAGGGGTGTCCAAGGTGGACCATGCCACAGCTGCCCTCCACAGGGGATGACGAAGTGTTCGCTTCTGGCTGCACCCCGCCTCATGGCTGTGCTGTATGGAGCTGCCTCTCAGCCAGTGGGCTGCAGGCTCTCACCCAGTCTCCACTACTGCTCCCCAGGAAGGCAGCGTCCTCGCAGTGCTTGGACCCCACAGATGAGAATGTGGATGTCTTTCCCACCACTGCAGAAGCATCCCCTCTCAGCCAAGCCTTCTCCCGGAGGCGCCCCTTCAGCAGGACTTACACCCGGAAGAAGCTCATTAGCTAA

Related Sequences

XP_004852823.1 Protein

Ticrr PREDICTED: treslin isoform X1 [Heterocephalus glaber]

Length: 1892 aa      View alignments
>XP_004852823.1
MACCHKVMLLLDTAGGAVLQSSARRAALRLLTYLGCRFGLARVHWAFKFFDSQGARGRPSRTSDFRELGTLSWDYFEEELEARLGGLAPGAHLPGPAARASHMHSALMETLLDYQWDRPEITSPTKPILRSSGRRLLDAESEAKEAESALGGLVNAVFLLAPCPHSQRELVQFVSGCEAQAQRLPPTPKQVMEKLLPRRVQEVMVARKITFFWVDTTEWSKLWESPDHVGYWTICELLHEGGGTVLPPETFNWGVSKAGKMILGGEGKMSSDSHLSPWISTLPTDATLNCLLYNSAVYESSFPRVEGTLFLPVKGKEIQETWAITLEPLAMHQRHFQNPVRIFLKGSMVQWSLPMSDTLGTNSWMLQSPEENRLTQGQLFQQLASSLTAEELHLVASVDLGEGWAPVTGVLSPLSASAMILTVLHAKEAEFQGHFLHTVVAGSPQDTACLFSDVTDGVLNQIHHLFEDAAASAPPVPEWAQQELDRTTPWSPAVLEKWFPFSNISGASSNLMESFWSLQDASANKEQSSKTESELTHCLSEFYQRKSREESTVANQEDSKKKRGIPRTPVRQKMNTMCRSLKMLNVARLNVKAQKLHPDGSPDVAGEKVIQKTVSGRTTDKLEDRGRSLRSSKPKDFKTEEELLSYIHENYQKAVATGEVTLYSCAQNMISTIKVFLKLKGAKEVEVNCLNHIKSNLLKASKNLRQNLGKKLDKEDKVRDCQLQVFLRLEMCLQCPSILENPEEMEQVVEEVTALLRIVCLTEDSAYLANFLEEILKLYIDSIPETLGKLYNSLGFEIPQKLAGILPTDFFSDDSMTQESKSPLLSVPLPSSAHRSVSGSTEADQLEELRTRSAKKRRKNALIRHKSLAEVSQNLRQIEIPKVSKRATKNESSHPAPQQPAVPAKGTAQEVTKVRRNLFNQEMISPSKRSLKRGLPRSHSVSALEGLDHKRDNFKKAKSTTCQGYHKLLTKSVAETPVHKQISRRLLHRQIKGRSSDPGPDIDVVDESPEKGDEISLRRSPRIKQLPFSRRNSGSFYSVSQPALRSMQRVRSFQQNKSDQRENSPIQSIQSPKRLLFGAVSEMVSPSGKGSARIKRLSRSKLSSEIPPVYQTPKKSYRKSPSFPKTTPRRFPLQTAPCTLERPLCPTTEVTPTESAMAEKAPQNPSSSSHCSQLASRATLQEGPSRAEGGSPLDIDTPRTPTRPGAQPPGFLLNHAWPRLMNSSPESPSCPTSPIPSIPQPQSECVTSTKHCLRTPPKAAALLGPPQGQKCQQPLLPRLSQAEVPAQTLKDKAVRTSKRPRNTTVTSSPPGAPEKWDVPKSPLRSPSTAPPGPGGLDQKEHQASPSRATSPSCAGPSTPPTVPQRVASVTVPPPPPSKLERQYRKTSNPEQGSLECQPGPPSVVLGVATATSPAATTGSKKDRKEGSLSPQSSPERQRHLGAGVSSDCHGSSPLLVASDTDYLTLLEAKHWGDGSHAVRGGISPGDEDTGLRTADHAWEPPSILDARTSPPASCSGPGSPMTVSYTLCCPPDGWQHQAVTQLESPRALVRPPQVPSSPHTYEVELEMQASGLPKLRIKKVDSSALAEAEGLGEEGSLPGLSMPRISRATSKPEATYMSPPCLRPSHSTPGKGQTYICQSCTPTHCPSSTPSPFQTDVGIPWTPSPKHSGKTTPDTIKDWPRRKRAVDCSNGLSSGRSEAGTDPEPQAKEQGLELSLHKTAILEDFELEGVCQLPDQSPPGDSVPKAEEAFSWGQFGLGSRKRHLFAKEEGECGAKRVYEAPREDANMRNQEKGCPRWTMPQLPSTGDDEVFASGCTPPHGCAVWSCLSASGLQALTQSPLLLPRKAASSQCLDPTDENVDVFPTTAEASPLSQAFSRRRPFSRTYTRKKLIS