Details from NCBI annotation

Gene Symbol Det1
Gene Name de-etiolated homolog 1 (Arabidopsis), transcript variant X1
Entrez Gene ID 101725685

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DET1 ENSCPOG00000014493 (Guinea pig)

Gene Details

de-etiolated homolog 1 (Arabidopsis)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013059, Guinea pig)

Protein Percentage 99.64%
CDS Percentage 94.84%
Ka/Ks Ratio 0.00804 (Ka = 0.0017, Ks = 0.2144)

DET1 ENSG00000140543 (Human)

Gene Details

de-etiolated homolog 1 (Arabidopsis)

External Links

Gene Match (Ensembl Protein ID: ENSP00000456340, Human)

Protein Percentage 99.82%
CDS Percentage 91.92%
Ka/Ks Ratio 0.00225 (Ka = 0.0009, Ks = 0.3809)

Det1 ENSMUSG00000030610 (Mouse)

Gene Details

de-etiolated homolog 1 (Arabidopsis)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032839, Mouse)

Protein Percentage 99.82%
CDS Percentage 89.62%
Ka/Ks Ratio 0.00132 (Ka = 0.0008, Ks = 0.627)

Det1 ENSRNOG00000018515 (Rat)

Gene Details

de-etiolated homolog 1 (Arabidopsis) (Det1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000058942, Rat)

Protein Percentage 97.39%
CDS Percentage 87.71%
Ka/Ks Ratio 0.0272 (Ka = 0.0184, Ks = 0.6762)

Genome Location

Sequence Coding sequence

Length: 1722 bp    Location: 15884105..15869948   Strand: -
>XM_004852740.1
ATGGATCACGTTTCCACCATCAAACCTCGAAGAATCCAAAACCAGAATGTCATTCACCGTTTGGAACGTCGGCGGATCAGTTCAGGCAAGGCAGGTACCCACTGGCACCAGGTCCGAGTGTTTCACCAGAATGTCTTCCCCAACTTCACAGTTGTCAACGTTGAAAAGCCTCCTTGTTTCTTGCGTAAATTCTCACCTGATGGACGCTACTTTATTGCTTTTTCTTCTGATCAGACTTCCCTTGAAATCTATGAGTACCAGGGCTGCCAAGCAGCAGAGGACTTACTACAGGGCTATGAGGGGGAGATCCTGTCTAATGGCAATGACCAGCGGTCAGTCAACATCCGGGGCCGGCTCTTTGAACGCTTTTTTGTCTTGCTGCACATTACCAATGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTGCAGCCTTTTCACCGATGACTGCCGGTGTGTCATCGTGGGCTCTGCGGCCTATCTCCCGGATGAGCCTCACCCTCCGTTCTATGAGGTGTATCGGAACAGTGAGTCAGTCACCCCAAACCCACGGTCCCCACTAGAGGACTATTCCCTGCACATCATTGACCTTCACACTGGCCGCTTGTGTGATACACGCACATTTAAGTGTGATAAAGTGGTTCTGTCACACAACCAAGGGCTATACTTGTATAAAAACATCCTGGCCATCTTGTCTGTGCAGCAGCAGACCATCCATGTCTTCCAGGTGACCCCTGAAGGCACTTTCATTGACGTGCGGACCATTGGCCGCTTCTGCTATGAAGATGACCTGCTCACGGTGTCAGCTGTCTTCCCTGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAACCCCTTCAGGGATCCATTCATCAACTCCCTGAAACACCGGCTGCTGGTTTATCTGTGGCGCCGGGCAGAACAGGATGGCAGCGCAATGGCCAAGAGGCGCTTCTTCCAGTACTTTGACCAGCTGCGGCAACTGCGCATGTGGAAAATGCAGCTTCTGGACGAAAACCATCTGTTTATCAAGTATACCAGTGAAGACGTGGTGACACTGCGGGTCACAGATCCATCTCAGGCGTCTTTCTTTGTGGTGTACAACATGGTGACAACTGAAGTGATTGCTGTGTTTGAAAATACGTCGGATGAGCTTTTGGAGCTCTTTGAGAACTTCTGTGATCTATTCCGCAATGCTACTCTGCACAGTGAAGTCCAGTTTCCCTGTTCAGCCTCTAGCAACAATTTTGCAAGGCAGATCCAGCGCCGCCAAGACAATACTGACTGTGCGCAGAGATTTGTCGGCCTGTCCGAGTGCTTTCTTCTGATAAAGAGTAGCAGGTTCAAAGACACAATTATAAACGCCAAGTATGGAGGGCACACGGAAGCAGTGCGCCGGCTGCTGGGTCAGCTCCCCATCAGTGCCCAGTCCTACAGCGGCAGCCCCTACCTGGACTTGTCCCTCTTCAGCTACGATGACAAGTGGGTGTCAGTCATGGAGCGACCCAAGACCTGTGGAGACCACCCTATCAGGTTCTATGCCCGGGACTCTGGCCTGCTCAAGTTTGAGATCCAGGCTGGCTTACTGGGCCGCCCCATCAACCACACAGTGCGACGCCTCGTTGCCTTCACCTTTCACCCTTTTGAGCCTTTTGCCATTTCCGTGCAGAGGACTAATGCGGAGTATGTTGTCAACTTCCACATGCGACACTGCTGCACGTAG

Related Sequences

XP_004852797.1 Protein

Det1 PREDICTED: DET1 homolog isoform X1 [Heterocephalus glaber]

Length: 573 aa      View alignments
>XP_004852797.1
MDHVSTIKPRRIQNQNVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFSSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFVLLHITNVAANGEHLNRECSLFTDDCRCVIVGSAAYLPDEPHPPFYEVYRNSESVTPNPRSPLEDYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPFRDPFINSLKHRLLVYLWRRAEQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDVVTLRVTDPSQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHSEVQFPCSASSNNFARQIQRRQDNTDCAQRFVGLSECFLLIKSSRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGLLKFEIQAGLLGRPINHTVRRLVAFTFHPFEPFAISVQRTNAEYVVNFHMRHCCT