Sequence details NCBI ID: XM_004852701.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ttc23
Gene Name tetratricopeptide repeat domain 23, transcript variant X3
Entrez Gene ID 101708793

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTC23 ENSCPOG00000003733 (Guinea pig)

Gene Details

tetratricopeptide repeat domain 23

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003371, Guinea pig)

Protein Percentage 84.68%
CDS Percentage 86.64%
Ka/Ks Ratio 0.2491 (Ka = 0.0878, Ks = 0.3525)

TTC23 ENSG00000103852 (Human)

Gene Details

tetratricopeptide repeat domain 23

External Links

Gene Match (Ensembl Protein ID: ENSP00000377690, Human)

Protein Percentage 76.73%
CDS Percentage 82.48%
Ka/Ks Ratio 0.34024 (Ka = 0.142, Ks = 0.4175)

Ttc23 ENSMUSG00000030555 (Mouse)

Gene Details

tetratricopeptide repeat domain 23

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032774, Mouse)

Protein Percentage 69.06%
CDS Percentage 76.61%
Ka/Ks Ratio 0.29919 (Ka = 0.2027, Ks = 0.6774)

Genome Location

Sequence Coding sequence

Length: 1344 bp    Location: 5107121..5191421   Strand: +
Raw sequence   
>XM_004852701.1
ATGCAAGAATCACAGGAGACCCACATATCCAACCACCTAGATGAAGTCGTTGCTGCTGTCAGCATCAATCCGAGAAAGAAGATCCAGAACAAACTGCCTCAGACCGTGCTATTCCAGCCTCCTCGAGAGAAACTCCACCTCTGTGAGGAGAAAGCCAAGTCCTGCTTCAGCAGTCACCAATATAAACAAGGTATCCACGAACTTTCGCGTTGCATAGCATTGACGAGGATTTGCTATGGCGACTCCCACTGGAAACTGGCAGAGGCACATATCAGTTTGGCTCAAGGCTACCTCCTGATGAAAGGATTTTCACTGCAAGCAAAACAACACGCAGAAAAGGCCAAAGAGATCCTCACGGACTTCATCGTGCCTCCTTATGATGACAATACAGATGTCTTCAAGTGCTCTGTAGAGCTTTTCCATACCTTGGGGAGAGCCTTCCTTTCCCTTCAGAAATTTAAGGAAGCATCAGAGAATTTGGTGAAAGCAGAGAGACTTTCAAGGGAGCTGCTACAGTGTGGAAGGATTGTAAAGGAAGAGTGGATAGAAGTCCAAGCACGGATCAAATTGTCATTTGCACAGGTCTATCATAGTCAAAAGAAATCACAAGAAGCTCTGCCCCACTACCAAGAGGCATTGGAATATGTGGAGATCAGCAAAGGTGAAGAAAGTCCCGAGTATGTCTCCATCCTGAGAGAATTAGCAGGTGCAGAGCAAGCCCTGGGGTTCCACAACACAGCCATCAACCATTTCTTACAGGCTCATGTCATCATCCTGGGGAGAAGCCCCTCTCAAGAGGAGGCAGCGGACTCTGCACAACTTGTTGCCCGTGCTGCTGTCGCTTCCAGGAGGCCGGAGCACCATGATGTGGCTGAGAAGTATTTTCAAGAGAGTATGGCTCATTTTAAGAATGCTGAAGGGGCAGGAAACACCAAATTTCTTGCAATACAGGATGAATTCTGCCATTTTCTACAAATCACTGGACAAAAAGAGAGAGCAACCTTGATCCTGAAGGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGGCTATTTCAGTCTTGAGGTAGCCGAAACTTACAAGCTCGTGGGTGGGGCAGACCTGGCGCAGGGGAACCACAGCGGGGCCCACAAGAATCTGAAGAAGTGTCTTCAGATTCAGTCGCTCTTGTATGGACCACAGAACAAGAAGACCGTGGCCACCCAGCAGTCGGTGGACATCCTGTCCAGGGCACGTGAGGGCACCACAAAGCCAAGGCAGTCTCCAAAAGCCAAAGTGGCCTTCTGCACCAGCGCCTCTCAGCGCCCCTCAGCTCCCAGGAAGGGCAGGCCCAACCTGGCAGACTGA

Related Sequences

XP_004852758.1 Protein

Ttc23 PREDICTED: tetratricopeptide repeat protein 23 isoform X3 [Heterocephalus glaber]

Length: 447 aa      
>XP_004852758.1
MQESQETHISNHLDEVVAAVSINPRKKIQNKLPQTVLFQPPREKLHLCEEKAKSCFSSHQYKQGIHELSRCIALTRICYGDSHWKLAEAHISLAQGYLLMKGFSLQAKQHAEKAKEILTDFIVPPYDDNTDVFKCSVELFHTLGRAFLSLQKFKEASENLVKAERLSRELLQCGRIVKEEWIEVQARIKLSFAQVYHSQKKSQEALPHYQEALEYVEISKGEESPEYVSILRELAGAEQALGFHNTAINHFLQAHVIILGRSPSQEEAADSAQLVARAAVASRRPEHHDVAEKYFQESMAHFKNAEGAGNTKFLAIQDEFCHFLQITGQKERATLILKESLEAKVEAFGYFSLEVAETYKLVGGADLAQGNHSGAHKNLKKCLQIQSLLYGPQNKKTVATQQSVDILSRAREGTTKPRQSPKAKVAFCTSASQRPSAPRKGRPNLAD