Details from NCBI annotation

Gene Symbol Lrrc28
Gene Name leucine rich repeat containing 28, transcript variant X3
Entrez Gene ID 101707481

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC28 ENSCPOG00000007104 (Guinea pig)

Gene Details

leucine rich repeat containing 28

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006404, Guinea pig)

Protein Percentage 95.64%
CDS Percentage 93.55%
Ka/Ks Ratio 0.1217 (Ka = 0.0222, Ks = 0.1826)

LRRC28 ENSG00000168904 (Human)

Gene Details

leucine rich repeat containing 28

External Links

Gene Match (Ensembl Protein ID: ENSP00000304923, Human)

Protein Percentage 94.01%
CDS Percentage 90.19%
Ka/Ks Ratio 0.09888 (Ka = 0.031, Ks = 0.3134)

Lrrc28 ENSMUSG00000030556 (Mouse)

Gene Details

leucine rich repeat containing 28

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052177, Mouse)

Protein Percentage 88.28%
CDS Percentage 87.1%
Ka/Ks Ratio 0.1729 (Ka = 0.0663, Ks = 0.3833)

Lrrc28 ENSRNOG00000023274 (Rat)

Gene Details

leucine rich repeat containing 28 (Lrrc28), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030745, Rat)

Protein Percentage 88.83%
CDS Percentage 87.47%
Ka/Ks Ratio 0.16312 (Ka = 0.0617, Ks = 0.3785)

Genome Location

Sequence Coding sequence

Length: 1128 bp    Location: 5105013..4984446   Strand: -
>XM_004852696.1
ATGCCTGACGGAATATGTTCAGTCATGGCTTCTGAACTTTGCAAGACGATTTCTGTGGCGAGGCTTGAAAAGCACAAGAATTTGTTCTTAAATTACAGAAACCTGCACCATTTCCCACTGGAGTTACTGAAGGGTGAAGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTTACAACCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTTCACTCAAATAACATAGTTGTGGTCCCGGAAGCTATTGGGTCCCTTGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTGGAAATTGTTTGCCCAGAAATCGGTCGTCTGAGAGCTTTACGTCATCTTCGATTGGCTAACAACCAACTGCAATTCCTACCTGCAGAGGTCGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTGCCAACCGTTTGCCAACTTTGCCCGAGAGGCTTCACCTGTGCCTCTCCCTGCAGCACCTCACCGTGGACCGCAATCGGCTGTGGTGTGTGCCACGCCGCCTCTGCCAGCTGCCCAGCCTCAGCGAGCTCTCCATGGCTGGAAACCGTCTCGCCTTTCTGCCCCTCGATCTAGGTCGATCTCGAGAACTACAGTATGTGTACGTGGATAACAACATTCACCTGAAAGGGCTGCCATCCTACCTGTACAATAAAGTCATCGGGTGCAGCGGCTGTGGGGCCCCCATCCAGGTGTCGGAGATGAAGCTGCTCTCCTTTTCATCGGGGCAGCTGACCGTCTTCCTGCCAGCCGAGGTGAAGGCCATAGGGACAGAGCGTGACCACGTGCTGCCTCTGCAGGAGCTGGCCATGCGGAGTCTCTACCACGCCTGCCACCGCTTCCTCAAAGATTTGAACTTCCTGTCTCCCATCTCATTACCCAGAAGTCTCCTGGAGCTGCTGCACTGTCCCCTGGGACACTGTCACCGGTGTAGTGAGCCCATGTTTACCATCGTCTACCCCAAGCTCTTCCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGGGGACGACAGCGGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGATGTTTGACCTGCTGAGTTGA

Related Sequences

XP_004852753.1 Protein

Lrrc28 PREDICTED: leucine-rich repeat-containing protein 28 isoform X3 [Heterocephalus glaber]

Length: 375 aa      View alignments
>XP_004852753.1
MPDGICSVMASELCKTISVARLEKHKNLFLNYRNLHHFPLELLKGEGLQYLERLYMKRNSLTTLPENLAQKLPNLVELYLHSNNIVVVPEAIGSLVKLQCLDLSDNALEIVCPEIGRLRALRHLRLANNQLQFLPAEVGDLKELQTLDISANRLPTLPERLHLCLSLQHLTVDRNRLWCVPRRLCQLPSLSELSMAGNRLAFLPLDLGRSRELQYVYVDNNIHLKGLPSYLYNKVIGCSGCGAPIQVSEMKLLSFSSGQLTVFLPAEVKAIGTERDHVLPLQELAMRSLYHACHRFLKDLNFLSPISLPRSLLELLHCPLGHCHRCSEPMFTIVYPKLFPLRETPMAGLHQGTTAVSFVAYCCSTQCLQMFDLLS