Sequence details NCBI ID: XM_004852674.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Chsy1
Gene Name chondroitin sulfate synthase 1
Entrez Gene ID 101700301

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHSY1 ENSCPOG00000008354 (Guinea pig)

Gene Details

chondroitin sulfate synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007511, Guinea pig)

Protein Percentage 96.87%
CDS Percentage 92.75%
Ka/Ks Ratio 0.04605 (Ka = 0.0143, Ks = 0.3104)

CHSY1 ENSG00000131873 (Human)

Gene Details

chondroitin sulfate synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000254190, Human)

Protein Percentage 95.76%
CDS Percentage 89.65%
Ka/Ks Ratio 0.04011 (Ka = 0.0204, Ks = 0.509)

Chsy1 ENSMUSG00000032640 (Mouse)

Gene Details

chondroitin sulfate synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047487, Mouse)

Protein Percentage 93.75%
CDS Percentage 87.71%
Ka/Ks Ratio 0.0447 (Ka = 0.0296, Ks = 0.6622)

Chsy1 ENSRNOG00000012698 (Rat)

Gene Details

chondroitin sulfate synthase 1 (Chsy1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016939, Rat)

Protein Percentage 93.65%
CDS Percentage 87.69%
Ka/Ks Ratio 0.04866 (Ka = 0.0313, Ks = 0.6436)

Genome Location

Sequence Coding sequence

Length: 2409 bp    Location: 3567770..3628354   Strand: +
Raw sequence   
>XM_004852674.1
ATGGCCGCGCGCGGCCGGCGCGCCTGGCTCAGCGTGCTGCTCGGGCTCGTGCTGGGCTTCGTGCTGGCCTCGCGCCTCGTCCTGCCCCGCGCCTCCGAGCTGAAGCGAGCGGGCCCGCGGCGCCGCGCCGGCCTCGAGGGATGCCGCTCGGCGCAGGCTGCGGCTTCCCAGGCCGGCGGGGCGCGCGGCGACGCGCGCGGGGTGCAGCCTTGGCCGCAAGGCGCGGGCCCGGATGGCGGCCAGCGCGACGGCAACTTTATCTTTGTGGGAGTCATGACCGCCCAGAAATACCTGCAGACCCGCGCCGTGGCCGCACACAGAACGTGGTCCAAGACAATTCCTGGGAAAGTTGAATTCTTCTCTAGTGAGGGTTCAGATACATCTATACCAATTCCGATAGTGCCACTACGGGGCGTAGATGACTCCTACCCACCCCAGAAGAAGTCTTTTATGATGCTCAAGTACATGCATGACCACTACTTGGACAAGTATGAATGGTTTATGAGAGCAGATGATGATGTTTACATCAAAGGAGATCGTCTGGAGAGTTTTCTGAGGAGTTTGAATAGCAGTGAACCCCTCTTTCTTGGGCAGACAGGACTGGGCACAACAGAAGAAATGGGGAAACTGGCCCTTGAGCCCGGTGAGAACTTCTGCATGGGGGGCCCTGGTGTGATCATGAGCCGAGAGGTGCTTCGGAGGACGGCCCCACACATTGGCAAGTGTCTCCGGGAGATGTACACCACCCACGAGGACGTGGAGGTGGGAAGATGTGTCCGGAGGTTCGCCGGTGTGCAGTGTGTCTGGTCTTATGAGATGCAGCAGCTTTTTTATGAGAATTATGAACAGAACAAGAAGGGGTACATTAGAGATCTCCACAACAGTAAAATTCACCGAGCTATCACATTACATCCCAACAAAAACCCTCCCTACCAATACAGACTGCACAGCTACATGCTCAGTCGCAAAATCGCTGAGCTGAGGCATCGCACAATCCAGCTCCACCGAGAAATCGTCCTGATGAGCAAATATAGCAGCACAGAGATCCACAAGGAAGACCTCCAGTTGGGCATCCCCCCTTCCTTTATGCGCTTTCAGGCCCGCCAGCGGGAGGAGATTCTGGAGTGGGAGTTTCTGACTGGAAAGTACTTGTATTCGGCTGCCGACGGCCAGCCCCCCCGAAGAGGAATGGACTCTGCGCAGAGGGAAGCCTTGGACGACATCGTCATGCAGGTGATGGAGATGATCAATGCCAATGCCAAGACCCGAGGCCGCATCATCGACTTCAAGGAGATCCAGTATGGCTACCGGCGCGTGAACCCCCTGTACGGGGCGGAGTACATCCTGGACCTGCTGCTCCTGTACAAGAAGCACAAAGGGAAGAAGATGACGGTGCCCGTGAGGAGGCACGCATACCTGCAGCAGACCTTCAGCAAGATACAGTTCAGGGAACACGAGGAGCTGGATGCGCAGGAGCTGGCCGACAGGATCAATCAGGACTCGGGCTCCCTGTCCTTCCTCTCCAATTCCCTGAAGAAGCTTGTTCCCTTCCAGCTCCCCGGGTCCAAGAACGAGCGCAAAGAGCCCAAAGATAAGAAGATAAACATCCTGATTCCTTTGTCTGGACGTTTTGACATGTTTGTGAGATTTATGGGAAACTTTGAGAAGACGTGTCTCATTCCTAGTCAGAATGTCAAGCTAGTCGTTCTACTTTTCAATTCCGACTCCAACCCTGACAAGGCCAAGCAAGTTGAACTGATGAGAGATTACCGTGTCAAGTATCCAAAAGCGGACATGCAGATTTTGCCTGTGTCTGGAGAGTTTTCAAGAGCTCTGGCCCTTGAAGTAGGATCTTCTCAGTTTAATAATGAGTCTCTACTCTTCTTCTGTGATGTTGACCTGGTGTTTACTACGGAATTCCTGCAACGATGTCGAGCAAATACAGTTCTGGGCCAACAGATATATTTCCCCATCATCTTTAGCCAGTATGATCCAAAGATTGTCTATAGCGGGAAAGTTCCCAGTGACAACCATTTTGCCTTTACTCAGAAAACTGGCTTCTGGAGAAACTATGGGTTCGGCATCACTTGTATTTATAAAGGAGACCTTGTCCGCGTGGGTGGCTTTGATGTTTCCATCCAGGGGTGGGGGCTGGAGGACGTGGACCTCTTCAACAAGGTTGTCCAGGCGGGTCTGAAGACGTTCAGGAGCCAAGAAGTGGGAGTAGTCCACGTCCATCACCCGGTGTTCTGTGACCCCAATCTGGACCCCAAACAGTACAAAATGTGCTTGGGTTCCAAAGCATCAACATATGGGTCTACGCAGCAGTTGGCTGAAATGTGGCTAGAAAAAAACAATCCAGGTTACAGTAAAAGCAGCAATAATAATGGCTCCATGAGGACAGCCTGA

Related Sequences

XP_004852731.1 Protein

Chsy1 PREDICTED: chondroitin sulfate synthase 1 [Heterocephalus glaber]

Length: 802 aa      View alignments
>XP_004852731.1
MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRAGLEGCRSAQAAASQAGGARGDARGVQPWPQGAGPDGGQRDGNFIFVGVMTAQKYLQTRAVAAHRTWSKTIPGKVEFFSSEGSDTSIPIPIVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRTAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVLMSKYSSTEIHKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSAADGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPLYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFREHEELDAQELADRINQDSGSLSFLSNSLKKLVPFQLPGSKNERKEPKDKKINILIPLSGRFDMFVRFMGNFEKTCLIPSQNVKLVVLLFNSDSNPDKAKQVELMRDYRVKYPKADMQILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEMWLEKNNPGYSKSSNNNGSMRTA