Sequence details NCBI ID: XM_004852653.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fan1
Gene Name FANCD2/FANCI-associated nuclease 1, transcript variant X4
Entrez Gene ID 101722565

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAN1 ENSCPOG00000013317 (Guinea pig)

Gene Details

FANCD2/FANCI-associated nuclease 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011988, Guinea pig)

Protein Percentage 79.74%
CDS Percentage 85.25%
Ka/Ks Ratio 0.3314 (Ka = 0.1125, Ks = 0.3394)

FAN1 ENSG00000198690 (Human)

Gene Details

FANCD2/FANCI-associated nuclease 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000354497, Human)

Protein Percentage 79.17%
CDS Percentage 84.57%
Ka/Ks Ratio 0.3594 (Ka = 0.1245, Ks = 0.3465)

Fan1 ENSMUSG00000033458 (Mouse)

Gene Details

FANCD2/FANCI-associated nuclease 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130012, Mouse)

Protein Percentage 71.56%
CDS Percentage 77.0%
Ka/Ks Ratio 0.31712 (Ka = 0.1925, Ks = 0.6071)

Fan1 ENSRNOG00000023985 (Rat)

Gene Details

FANCD2/FANCI-associated nuclease 1 (Fan1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032711, Rat)

Protein Percentage 70.81%
CDS Percentage 77.28%
Ka/Ks Ratio 0.31199 (Ka = 0.1882, Ks = 0.6033)

Genome Location

Sequence Coding sequence

Length: 3069 bp    Location: 1955188..1923777   Strand: -
Raw sequence   
>XM_004852653.1
ATGATGCCAGAAGGGAAATCTCCTGACAAAAAAAGACCCCGTAGAAGCTTATCAACTAGCAAAACTAAAAGCAATGCCTCTAACTCTATCATTTCATATTTTAACAATGCACCACCTGCTAAACTTGCCTGCCCCATTTGTAGTAAAATGGTGCTCAGGTACGACTTAAACCAGCACCTCGATCAGATGTGTGCTAACAGTGATGTCATTCATGTTGGTCCAGTGCAGGTTGGCTTAATGAATTCAAATTCATCCACAGCAGAGTTAACCAGTGTTGCCTCAGAAGATGTGACCCCAGAGACCCCATCACCACCAAAGACAAGTTTAATCCCTGGCCAGAGTGATTCGGCAGAAGTGGGTGTAAAACAGACCAGTCCCTACTTTAAAAGTGATGATGCCATAGTATGCAAAAATCAGGAAGAGTTGAGGAATCATAATGTGAAAGTCATTTCTTTGGGAAGCCTGTCATCTAAACTGTCAAGAAAGTACATGAAGGCCAAAAAGTCCCTAGATAAGTGTGAAGAATTTGCCAGTCATTGTCCACAGAGTTCCATATCCACAGCTGTTAGGAGCCTGGCTGATAACAGTTCAGAAATTGAGGATGAGGACAAAAATTTGAGTACTCAGAAGGAAAACATTTTTACATGTGATTCTCTAAAGGAAGAGAATACTCTTGAATGTATGGTAAACAGTAGTAAAATAAGAGAAGCTGAAAGCCAAAAGGCTACCCAGGAATGTGGGAAATTAGCCCTCAGCCCTGGCTTGTCAGATAAAGCTCTCATAGGATTTTCATCAGATTTAACTCTTGGGGAAAATTTCAAGTCCACTTCAGAAGATGGGGCTGTAAAGCAAGAGAACATCAGAGGAGTAGATGATAAAGATGTTGAAAAATGTGAGAGGTACAGTTGTGAAGAAGTAGAAATCACTGTTGCTTCAGAAGTTAAAACACAGTTATCAAGTTCAGAGGCAAAATCTAGTTCCACAAATGATGGTTCTAAATGGAGTGACATCCATGAACAACTTCTGGAGGATGACAGCGTCCTAAAGAATAAAGTAGTTTGCAACATTCCTCTGGGGCTGGGGTCAGGTTGTGATGTTCCTGGTGATGCAGCTGTAACACCCTCAAGTCATCCTTACTATCTGCGGAGTTTCCTCCTGGTCCTGCAAGCCGTGCTAGAGAACGAAGATGACAGGCTGCTCTTTGATGAGGAGGATAAGGAAGTTATAAGCACATTTTATCAGTTATCAGCTAGTGGTCAGAAGTTATATGTAAGGCTCTTTCAACGTAAATTAACGTGGATTAAAATGAACAAATTAGAATATGAAGAGATTGCTCCAGACTTAACACCTGTGATTGAAGAATTGCAACATGCAGGCTTTGTACAGACAGAATCTGAGTTACAAGAGCTCTCTGAAGTACTTGAACTCCTTTCTGCTCCTGAACTGAAATCCCTGGCCAAGACCTTCCACCTGGTGAATCCCAATGGACAGAAACAGCAGCTGGTAGATGCCTTTCTCAGATTGGCCAAGCAGCGTTCAGTCTGCACTTGGGGCAAGAGTCAGCCTGGAATTGGAGCCGTTATTTTAAAAAGAGCTAAAGCCTTGGCTGGACAGTCACTGCGAGTCTGTAGAGGTCCCAGGGCTGTGTTTGCTCGGATCTTACTCCTGTTTTCATTGAGTGACTCTATGGAAGAAGAAGAAGGTGCTTGTGGTGGTCAAGGTCAGCTTTCCACAGTGCTTTTGGTCACTCTTGGCCGAATGCAGTTTCCTAGGTATACCATCAATCGGAAAACCCAAATCTTCCAAGACAGAGAGGATCTTATCAGATATGCAGCGGCTGCACACATGCTGAGTGACATTTCCACCGCCATGGCCAGTGGGAACTGGGAAGAAGCTAAGGAGCTCTCTGACAGTGCAAAAAGGGAATGGAACAAACTGAAAAACCACCCTTCCCTGAGGTACCATGAGGAGTTACCGCTCTTTCTGCGGTGTTTCACGGTCGGGTGGATTTATACACGGATTTTGTCCCAGACTGTTGAGATACTGCAGAGGCTTCACCTGTATGAGGAAGCTGTCAAGGAACTTGAAAACCTTTTGTCTCAGGAAATCTATTGTCCTGACAGTAGAGGCCGATGGTGGGACCGACTGGCTCTGAACCTGCACCAGCACCTGAAGCGCCTGGAACCGGCTGTCAGATGCATCGCTGACGGGCTGGCGGATCCACAAGTAAGGACAGGGCACCGCCTTTCGCTCTATCAGAGAGCCATGCGCCTGCGGGAGTCCCCGAGCTGTAAAAAGTACAAGGATCTCTTCTGCCGGCTGCCAGCAATAGCTGTGGAAGATGTTAAACACGTGACCATCACGGGCAGGCTGTGCCCGCAGCGTGGGATGGGCAAGTCCATGTTTATTGTGCAGGCTGGGGACACCGCCACCCCCACCATGGCCCTGTGCTCTGTGGAGGAGCTGGCGCTGGACCACTACAGGCGCAGTGGCTTTGATCAGGGGATTCACGGGGAAGGGTCCACCTTCAGCACGTTGTGCGGCCTCCTCCTATGGGATGTGATCTTCATGGCTGGGATCCCCGATGTCTTCAGAAATGCCTACCAGGCATCCCCGCTGGACTTGTGCACGGACAGCTTCTTCGCTAGCAGGAGGCCTGCGCTTGAAGCCAGGTTGCAGCTGATTCATGATGCCCCTGCACAGAGCCTTCGGGCCTGGGTCGCTGGCACGTGGCAGGCCCAGGAGGGCTGCGTGTCTTCCCTTATCAGCTGGGATCGCTTCGCCTCTCTTCAGCAAGCTCAGGATCTTGTCTCCTGCTTGGGGGGCCCCATCCTCAGCGGCGTGTGCCGCCACCTGGCTGCTGACTTTCGACACTGCCGAGGGGGCCTGCCGGACCTGGTGGTGTGGAACTCTCAGAGCCGTCACGTCAAGCTGGTGGAAGTGAAAGGCCCCAATGATCGTCTTTCACATAAGCAAATGATCTGGCTGGCTGAACTGCAGAAGCTGGGGGCTGAAGTAGAAGTCTGCCATGTGGTTGCAGTTGGGGCTAAGAGCAAGGGCCTCAGCTAA

Related Sequences

XP_004852710.1 Protein

Fan1 PREDICTED: fanconi-associated nuclease 1 isoform X4 [Heterocephalus glaber]

Length: 1022 aa      View alignments
>XP_004852710.1
MMPEGKSPDKKRPRRSLSTSKTKSNASNSIISYFNNAPPAKLACPICSKMVLRYDLNQHLDQMCANSDVIHVGPVQVGLMNSNSSTAELTSVASEDVTPETPSPPKTSLIPGQSDSAEVGVKQTSPYFKSDDAIVCKNQEELRNHNVKVISLGSLSSKLSRKYMKAKKSLDKCEEFASHCPQSSISTAVRSLADNSSEIEDEDKNLSTQKENIFTCDSLKEENTLECMVNSSKIREAESQKATQECGKLALSPGLSDKALIGFSSDLTLGENFKSTSEDGAVKQENIRGVDDKDVEKCERYSCEEVEITVASEVKTQLSSSEAKSSSTNDGSKWSDIHEQLLEDDSVLKNKVVCNIPLGLGSGCDVPGDAAVTPSSHPYYLRSFLLVLQAVLENEDDRLLFDEEDKEVISTFYQLSASGQKLYVRLFQRKLTWIKMNKLEYEEIAPDLTPVIEELQHAGFVQTESELQELSEVLELLSAPELKSLAKTFHLVNPNGQKQQLVDAFLRLAKQRSVCTWGKSQPGIGAVILKRAKALAGQSLRVCRGPRAVFARILLLFSLSDSMEEEEGACGGQGQLSTVLLVTLGRMQFPRYTINRKTQIFQDREDLIRYAAAAHMLSDISTAMASGNWEEAKELSDSAKREWNKLKNHPSLRYHEELPLFLRCFTVGWIYTRILSQTVEILQRLHLYEEAVKELENLLSQEIYCPDSRGRWWDRLALNLHQHLKRLEPAVRCIADGLADPQVRTGHRLSLYQRAMRLRESPSCKKYKDLFCRLPAIAVEDVKHVTITGRLCPQRGMGKSMFIVQAGDTATPTMALCSVEELALDHYRRSGFDQGIHGEGSTFSTLCGLLLWDVIFMAGIPDVFRNAYQASPLDLCTDSFFASRRPALEARLQLIHDAPAQSLRAWVAGTWQAQEGCVSSLISWDRFASLQQAQDLVSCLGGPILSGVCRHLAADFRHCRGGLPDLVVWNSQSRHVKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEVCHVVAVGAKSKGLS