Details from NCBI annotation

Gene Symbol Atl3
Gene Name atlastin GTPase 3, transcript variant X1
Entrez Gene ID 101711686

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATL3 ENSCPOG00000003766 (Guinea pig)

Gene Details

atlastin GTPase 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003401, Guinea pig)

Protein Percentage 98.52%
CDS Percentage 94.33%
Ka/Ks Ratio 0.04577 (Ka = 0.0091, Ks = 0.1995)

ATL3 ENSG00000184743 (Human)

Gene Details

atlastin GTPase 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000381844, Human)

Protein Percentage 95.56%
CDS Percentage 91.5%
Ka/Ks Ratio 0.08117 (Ka = 0.024, Ks = 0.2958)

Atl3 ENSMUSG00000024759 (Mouse)

Gene Details

atlastin GTPase 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025668, Mouse)

Protein Percentage 94.09%
CDS Percentage 89.71%
Ka/Ks Ratio 0.07804 (Ka = 0.0305, Ks = 0.3905)

ATL3 ENSRNOG00000021203 (Rat)

Gene Details

Atlastin-3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063444, Rat)

Protein Percentage 93.35%
CDS Percentage 89.03%
Ka/Ks Ratio 0.08957 (Ka = 0.036, Ks = 0.4019)

Genome Location

Sequence Coding sequence

Length: 1626 bp    Location: 22567829..22609115   Strand: +
>XM_004852570.1
ATGTTGTCCCCTCAGCGAGCGTTAGCGGCTGCCTCGAGAGGAGCAGGTGATGCCATGGAGAGTGGAAGGCCTGGGCCAGTGCAAGTCGTTTTGGTTCACAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTGGCCAGCATCCTCCTACAGGACCATATCCGAGATCTTGATGTGGTGGTGGTATCTGTGGCTGGTGCCTTCCGAAAGGGCAAGTCCTTCATTCTGGACTTCATGCTACGATACTTATATTCTCAGAAGGAAGGTGGTCATTCAAATTGGTTAGGTGACCCAGAGGAACCATTAACAGGATTTTCATGGAGAGGAGGTTCTGACCCAGAAACCACCGGGATTCAGATCTGGAGTGAAGTTTTCACTGTAGAGAAGCCAGGTGGAAAGAAGGTTGCAGTTGTTCTGATGGATACCCAGGGGGCATTTGACAGTCAGTCAACTGTGAAAGACTGTGCTACCATCTTTGCTCTGAGCACCATGACTAGTTCTGTTCAGATATACAATTTGTCCCAGAACATTCAGGAAGATGATCTTCAACAGCTGCAGCTCTTCACAGAATATGGTCGTCTGGCAATGGATGAAATTTTCCAAAAACCCTTCCAGACACTCATGTTTCTGGTTCGAGACTGGAGTTTCCCTTATGAGTATAACTATGGACTACAAGGAGGGATGGCATTTTTGGATAAACGTTTACAGGTGAAAGAACATCAACATGAAGAAATTCAGAATGTTCGAAATCACATTCACTCATGTTTCTCTGATGTCACCTGTTTTCTGTTACCACATCCAGGACTCCAAGTGGCCACAAGCCCTGACTTTGATGGGAAATTGAAAGATATTGCTGGTGATTTCAAAGAGCAGTTGGAGACACTAATACCATATGTATTAAATCCATCTAAGTTAATGGAAAAGGAGATCAATGGCTCAAAGGTCACCTGCCGGGGACTGTTGGAGTATTTTAAGGCATATATTAAAATTTATCAAGGAGAAGATCTGCCTCACCCCAAATCCATGCTTCAGGCCACTGCTGAAGCCAACAATTTAGCAGCTGCAGCCTCTGCCAAGGATGTTTATTACAACAACATGGAAGAGGTTTGCGGGGGAGAGAAGCCTTACTTGTCTCCAGACATTTTAGAGGAGAAGCACTGTGAATTCAGACAGCTCGCTCTGGACCAATTTAAGAAGACCAAGAAGATGGGTGGGAAGGATTTCAGTTTTCGTTATCAGCAAGAGCTGGAGGAGGAAATCAAGGAACTCTACGAAAACTTCTGCAAGCACAATGGGAGCAAGAATGTTTTTAGCACCTTCCGAACCCCTGCAGTGCTGTTCACGGGCATTGTGGCTTTGTATATAGCCTCTGGCCTCACTGGCTTTGTTGGTCTTGAGGTTGTGGCCCAGCTGTTCAACTGCCTAGTTGGACTGCTGTTAATAGCACTCCTTACCTGGGGGTACATCAGGTATTCCGGTCAGTACCGCGAGCTGGGTGGAGCTATTGACTCTGGCGCAGCGTATATATTAGAGCAGGCTTCTTCTCACATTGGTAATTCTACTCAGGCTGCTGTGAGGGATGCAGTTGTTGTGCGATCTCCGGCGGATAAAAAAGCTCAGTAG

Related Sequences

XP_004852627.1 Protein

Atl3 PREDICTED: atlastin-3 isoform X1 [Heterocephalus glaber]

Length: 541 aa      View alignments
>XP_004852627.1
MLSPQRALAAASRGAGDAMESGRPGPVQVVLVHKDQHSFELEEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQKEGGHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSFPYEYNYGLQGGMAFLDKRLQVKEHQHEEIQNVRNHIHSCFSDVTCFLLPHPGLQVATSPDFDGKLKDIAGDFKEQLETLIPYVLNPSKLMEKEINGSKVTCRGLLEYFKAYIKIYQGEDLPHPKSMLQATAEANNLAAAASAKDVYYNNMEEVCGGEKPYLSPDILEEKHCEFRQLALDQFKKTKKMGGKDFSFRYQQELEEEIKELYENFCKHNGSKNVFSTFRTPAVLFTGIVALYIASGLTGFVGLEVVAQLFNCLVGLLLIALLTWGYIRYSGQYRELGGAIDSGAAYILEQASSHIGNSTQAAVRDAVVVRSPADKKAQ