Details from NCBI annotation

Gene Symbol Rtn3
Gene Name reticulon 3
Entrez Gene ID 101710954

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RTN3 ENSCPOG00000004811 (Guinea pig)

Gene Details

reticulon 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004329, Guinea pig)

Protein Percentage 79.63%
CDS Percentage 86.73%
Ka/Ks Ratio 0.56312 (Ka = 0.1264, Ks = 0.2244)

RTN3 ENSG00000133318 (Human)

Gene Details

reticulon 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000367050, Human)

Protein Percentage 78.52%
CDS Percentage 85.98%
Ka/Ks Ratio 0.51421 (Ka = 0.1315, Ks = 0.2558)

Rtn3 ENSMUSG00000024758 (Mouse)

Gene Details

reticulon 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000065810, Mouse)

Protein Percentage 71.12%
CDS Percentage 80.54%
Ka/Ks Ratio 0.52267 (Ka = 0.1942, Ks = 0.3715)

Rtn3 ENSRNOG00000021202 (Rat)

Gene Details

reticulon 3 (Rtn3), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028785, Rat)

Protein Percentage 68.12%
CDS Percentage 78.29%
Ka/Ks Ratio 0.47871 (Ka = 0.217, Ks = 0.4532)

Genome Location

Sequence Coding sequence

Length: 3078 bp    Location: 22559016..22500808   Strand: -
>XM_004852568.1
ATGGCGGATTTGTCAGGAGCCACTCAGTCCCCGTCTGTCTCCTCGTCGTCCTCCGGGGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCGGGAGCCTGCCCTGCCCTTGGGTCGAAGAGCTGCAGCTCCTCCTGTGCCGATTCCTTTGTTTCTTCCTCTTCCTCTCAGCCTGTATCTCTATTTTCGACCTCAAAAGAGGAATTGAGCTCTCTTTGCTCTGATGAGCCACCTTCAGAAATTATGACTTCCTCCTTTCTTTCATCTTCTGAAATACATAACCCTGACCTTACAACACTCCATGGAAAAAAAACCGAAATGTTAGGCAGCCAGCCTGTTATAGCCAAAGAAGGAAAAGCCCACTTGGTTCTTCTAGATTTGAAAAAGATGGAAAAGCCTCAGGGAACCAGTAAGAACAGAGCAGACTCTCCAGTTTCTCTTGCACCAGGAGTTCCTTATAACCACTCCTCCATTCCAGCCAGTTTCCCAGAGCATCCTGCTTTTCTCTCAAAGGAAGCTGGTCAAGTAGAAGATCAAGTAAATAAAGATCAAGAATCCATGAACCCAAGTGAGGTACCAAGTAGGGATCAAACTGCATTGGATATTGATGACAGGTTCACTTTGCTAACAGCCCAGGAAACGCCCACTGAGCATTCTAAGGCAGAAGGCATTTGTACATATTCCTTGTCCCCATCTGAAGTTTCAAGTGGTGGTATTATAGAGAAAGATTCCCCTGAATCACCATTCGAAGTAATTATTGACAAAGCTGGGTTTGACAGAGAATTTAACGATTCATATAAGAAGAGCACAAATGATTTGGCTAGCTGGGCAGTCCACAATGATAGAGAATCACCTACAGACATGTTGGAGACTAATGACAAATTGTTTCCACTGAGAAGTAAAGAGGCAGGGCGTTACCCAACCTCTGCATTGCTCACTAGACAGTTTTCACACACAACTGCAGCACTGGAAAAGGTCTCTAGATGTGTGAGTGATATGCATAACTTTACTAATGAAATACTGACATGGAATTTGGTTTCCCAAGTGAAACAGCAGACTGACAAATCTGATTATACCACAAAAAGTACAGGACTTAACGGAAATGACTGTGTTTCAGAAATTCCAGTTGTAAATCTTAAAACAAACACTCATCAGAAAATTCCTGTATGCTCTATTAATGGGACCACTGCCATAACCAAATCCACAGGTGACTGGGCAAAATGTTCTCTCCCACAAGAAAACACTGTCACTGGAAAACCGATAAGAGACTGTCTCAGTCCCACAGAAGGAGTCAGTGTCAAAGGTGTACAAGGCAATGCACAAAAACAAGATGATGTGCTTTCAGAGTTGCCTGGATCTCCACACAAAGTGGTTACAGTGAAAATGATTTTATCTGATGACCACCTGAAGGATGAAATAAGCTGGCAGAGCTCAGTGCTAGGAGAAACCACTGAGGCGGATAGTTCCGGTGAGTCTGATGACACAGTTATAGAGGACATCCCAGAAGATAGATCATTTGAAAATAACAAAATTCTGGCCAAAAAACCTGTTTCCACTCCAGATGTTGTTGTGAAAACAGATGAAAGGGACATCAAAAAGATTCCCAGTTGTAAGATGACAGAAAATAAAAACTCTGAAGAGCCAGTCTGTGACTCTGAACTACATCAAGTTCTGCCTGATATTCTTGGAAGAAGTCTCGTTGGTGAGGCAGTGTCTTCACAGGTACCATATACAAGTGTCATATCAAAAGACAGGAAGCAGTCAGATACTGTGAGTGAAGTTGCTCCTAGAAAGCTTATTACAACTAACAACCCAAAACTTCCTTCAGCAGCACCTCCAAATGCTCTTAATGAGACAAAATTCTCACTAAATGTGATGACTTCTGCCAATTTGGAGTCATTACATGGAAAACATGTTAAAGATGTAGATGATTTCTCCCCAGAGGATTTGATAGCAACTATTACAGAAACCAGAGAGAAAGGAATAGTAGATAAAGAGGAAGGAGATAGCTCTGAAGCAATATCAGAAAAGATGACAGACTTTAAAAAAACTCTTTCTATAGAAGTCATGTATGAAAATGAGTCAGATGGTTCTCAAATTAAAGACATTAAAGGAAAATACATTGAACAAAACAAAGAAACAAATGGAAGTGAGTTTCTGGGCTTTTTCCGTACCCAGGTTCCAGTGGCATCTCTTGACCTAGAACAAGAGCAGCTCACAATCAGAGCCCTTAAAGAACTAGGAGAAAGACAGGCTGAGAAGTCAGCTCCTGCTCAGGAAGAAGAATCTCCTTCTGAAGAAAGACTTAAGCAAACATTTGCTCCAGAATCCTGGCCACAGAGATCATATGATGTTCTAGAACATACAGATATTGCGATTGGATCTGATCTTGGGATTTCCAAAAAGCCCACTGTTTTCAAAGAAACTAGGGTAGATGTTACTTCCAGCCTTAGCAAGACTGAACTGGTAAACAAACATGTTCTAGCGAGACTTCTGACACACTTCTCAGTGCACGATCTGATTTTCTGGCGAGACGTGAAGAAGACTGGGTTTGTCTTTGGCACCACACTGATCATGCTGCTTTCCCTGGCAGCCTTCAGTGTCATCAGTGTGGTGTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGAGTCTATAAGTCTGTCATCCAAGCTGTGCAGAAGTCAGAAGAAGGCCATCCATTCAAAGCCTACTTGGACTTGGACATTACCCTGTCCTCAGAAGCATTCCATAATTATGTGAATGCTGCAATGGTGCACGTCAACAGGGCCCTGAAGCTCATCATTCGTCTCTTTCTGGTGGAAGATCTGGTTGACTCCTTGAAGCTGGCTGTGTTCATGTGGCTGATGACCTATGTTGGTGCCGTTTTCAATGGAATCACCCTTCTGATTCTTGCTGAGCTGCTTGTTTTCAGCGTCCCAATTATCTATGAGAAGTACAAGACCCAGATTGATCACTATGTTGGCATAGCCCGAGATCAGACCAAGTCAATTGTTGAAAAAATCCAAGCAAAACTCCCTGGAATCGCCAAAAAAAAGGCCGAATAA

Related Sequences

XP_004852625.1 Protein

Rtn3 PREDICTED: reticulon-3 [Heterocephalus glaber]

Length: 1025 aa      View alignments
>XP_004852625.1
MADLSGATQSPSVSSSSSGAEPSAPGGGGSPGACPALGSKSCSSSCADSFVSSSSSQPVSLFSTSKEELSSLCSDEPPSEIMTSSFLSSSEIHNPDLTTLHGKKTEMLGSQPVIAKEGKAHLVLLDLKKMEKPQGTSKNRADSPVSLAPGVPYNHSSIPASFPEHPAFLSKEAGQVEDQVNKDQESMNPSEVPSRDQTALDIDDRFTLLTAQETPTEHSKAEGICTYSLSPSEVSSGGIIEKDSPESPFEVIIDKAGFDREFNDSYKKSTNDLASWAVHNDRESPTDMLETNDKLFPLRSKEAGRYPTSALLTRQFSHTTAALEKVSRCVSDMHNFTNEILTWNLVSQVKQQTDKSDYTTKSTGLNGNDCVSEIPVVNLKTNTHQKIPVCSINGTTAITKSTGDWAKCSLPQENTVTGKPIRDCLSPTEGVSVKGVQGNAQKQDDVLSELPGSPHKVVTVKMILSDDHLKDEISWQSSVLGETTEADSSGESDDTVIEDIPEDRSFENNKILAKKPVSTPDVVVKTDERDIKKIPSCKMTENKNSEEPVCDSELHQVLPDILGRSLVGEAVSSQVPYTSVISKDRKQSDTVSEVAPRKLITTNNPKLPSAAPPNALNETKFSLNVMTSANLESLHGKHVKDVDDFSPEDLIATITETREKGIVDKEEGDSSEAISEKMTDFKKTLSIEVMYENESDGSQIKDIKGKYIEQNKETNGSEFLGFFRTQVPVASLDLEQEQLTIRALKELGERQAEKSAPAQEEESPSEERLKQTFAPESWPQRSYDVLEHTDIAIGSDLGISKKPTVFKETRVDVTSSLSKTELVNKHVLARLLTHFSVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDLDITLSSEAFHNYVNAAMVHVNRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIIYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPGIAKKKAE