Details from NCBI annotation

Gene Symbol Otub1
Gene Name OTU domain, ubiquitin aldehyde binding 1, transcript variant X2
Entrez Gene ID 101706271

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OTUB1 ENSCPOG00000022165 (Guinea pig)

Gene Details

OTU domain, ubiquitin aldehyde binding 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020285, Guinea pig)

Protein Percentage 99.63%
CDS Percentage 94.71%
Ka/Ks Ratio 0.00354 (Ka = 0.0015, Ks = 0.4198)

OTUB1 ENSG00000167770 (Human)

Gene Details

OTU domain, ubiquitin aldehyde binding 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000444357, Human)

Protein Percentage 99.26%
CDS Percentage 94.22%
Ka/Ks Ratio 0.00732 (Ka = 0.003, Ks = 0.4154)

Otub1 ENSMUSG00000024767 (Mouse)

Gene Details

OTU domain, ubiquitin aldehyde binding 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025679, Mouse)

Protein Percentage 99.63%
CDS Percentage 92.0%
Ka/Ks Ratio 0.00241 (Ka = 0.0015, Ks = 0.6345)

Otub1 ENSRNOG00000021175 (Rat)

Gene Details

OTU domain, ubiquitin aldehyde binding 1 (Otub1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028752, Rat)

Protein Percentage 99.63%
CDS Percentage 91.14%
Ka/Ks Ratio 0.00212 (Ka = 0.0016, Ks = 0.7373)

Genome Location

Sequence Coding sequence

Length: 816 bp    Location: 22289639..22279325   Strand: -
>XM_004852553.1
ATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCAACTGGGCAGTGACTCCGAAGGTGTTAACTGTCTGGCTTATGATGAAGCTATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAGAATCCTCTGGTGTCGGAGCGGCTGGAGCTGTCGGTCCTGTACAAGGAGTATGCCGAGGACGACAACATCTATCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCATACATCCGGAAGACCAGGCCTGATGGAAACTGCTTCTATCGTGCTTTTGGATTCTCCCACTTGGAGGCGCTGCTGGATGACAGCAAGGAGTTGCAGCGGTTCAAGGCTGTGTCTGCCAAGAGCAAAGAGGACTTGGTGTCCCAGGGCTTCACTGAGTTCACCATTGAGGATTTCCACAACACGTTCATGGACCTGATCGAACAGGTGGAGAAGCAGACCTCTGTAGCCGACCTGCTGGCGTCCTTCAATGACCAGAGCACCTCGGACTACCTGGTGGTGTACCTGCGGCTGCTCACCTCGGGCTACTTGCAGCGTGAGAGCAAGTTCTTCGAGCACTTCATAGAGGGCGGGCGGACTGTCAAGGAGTTCTGTCAGCAGGAGGTGGAGCCCATGTGCAAGGAGAGTGACCACATTCACATCATCGCGCTGGCCCAGGCCCTCAGTGTGTCCATCCAGGTGGAGTACATGGACCGAGGCGAGGGTGGCACCACCAACCCGCACGTCTTCCCTGAGGGCTCCGAGCCCAAGGTCTACCTTCTCTACCGGCCGGGACACTACGATATCCTCTACAAATAA

Related Sequences

XP_004852610.1 Protein

Otub1 PREDICTED: ubiquitin thioesterase OTUB1 isoform X2 [Heterocephalus glaber]

Length: 271 aa      View alignments
>XP_004852610.1
MAAEEPQQQKQEQLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHVFPEGSEPKVYLLYRPGHYDILYK