Details from NCBI annotation

Gene Symbol Sf1
Gene Name splicing factor 1, transcript variant X1
Entrez Gene ID 101711802

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SF1 ENSCPOG00000012290 (Guinea pig)

Gene Details

splicing factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018639, Guinea pig)

Protein Percentage 92.55%
CDS Percentage 89.86%
Ka/Ks Ratio 0.23766 (Ka = 0.0593, Ks = 0.2494)

SF1 ENSG00000168066 (Human)

Gene Details

splicing factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000366604, Human)

Protein Percentage 96.35%
CDS Percentage 91.85%
Ka/Ks Ratio 0.09754 (Ka = 0.0256, Ks = 0.2623)

Sf1 ENSMUSG00000024949 (Mouse)

Gene Details

splicing factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000121309, Mouse)

Protein Percentage 99.37%
CDS Percentage 94.21%
Ka/Ks Ratio 0.0156 (Ka = 0.0032, Ks = 0.204)

Sf1 ENSRNOG00000021085 (Rat)

Gene Details

splicing factor 1 (Sf1), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028628, Rat)

Protein Percentage 99.37%
CDS Percentage 93.9%
Ka/Ks Ratio 0.01457 (Ka = 0.0032, Ks = 0.2182)

Genome Location

Sequence Coding sequence

Length: 1920 bp    Location: 21606068..21620957   Strand: +
>XM_004852462.1
ATGGCGACCGGAGCGAACGCCACGCCGCTGGACTTCCCAAGTAAGAAACGGAAGAGGAGCCGCTGGAACCAAGATACCATGGAACAGAAGACAGTGATTCCAGGAATGCCTACAGTTATTCCCCCTGGACTTACTCGGGAACAAGAAAGAGCTTATATAGTGCAACTGCAGATAGAAGACCTGACTCGTAAACTGCGCACAGGAGACCTGGGCATCCCCCCTAACCCTGAGGACAGGTCCCCTTCCCCTGAGCCCATCTACAATAGTGAGGGGAAGCGGCTTAATACTCGAGAGTTCCGTACCCGCAAGAAGCTTGAAGAGGAGAGGCACAACCTCATCACAGAGATGGTTGCCCTCAACCCCGATTTCAAACCGCCTGCAGATTACAAACCTCCAGCAACTCGTGTGAGCGATAAAGTAATGATTCCCCAAGATGAATATCCAGAAATCAACTTCGTAGGGTTGCTAATTGGACCAAGAGGGAATACCCTGAAGAACATTGAGAAGGAGTGCAATGCCAAGATCATGATCCGGGGAAAAGGATCTGTGAAAGAAGGGAAGGTTGGACGCAAAGATGGCCAGATGTTGCCAGGGGAAGATGAGCCACTTCATGCTCTAGTCACTGCCAATACAATGGAGAATGTCAAAAAGGCAGTAGAACAGATCAGAAACATTCTGAAGCAGGGCATTGAGACCCCAGAGGACCAGAATGATCTACGGAAGATGCAGCTTCGAGAGTTGGCTCGCTTGAATGGCACCCTTCGAGAAGATGATAACAGGATCTTAAGACCCTGGCAGAGCTCAGAGACTCGCAGCATTACCAACACTACAGTGTGTACCAAGTGTGGAGGGGCCGGCCACATTGCTTCAGATTGCAAGTTCCAGAGGCCTGGCGACCCCCAGTCAGCTCAGGATAAAGCACGGATGGATAAAGAGTATTTGTCCCTTATGGCTGAACTGGGTGAAGCACCTGTCCCAGCATCTGTGGGGTCCACCTCTGGCCCTGCCACCACACCCCTGGCCAGTGCACCGAGGCCTGCTGCTCCTGCCAATAATCCACCTCCACCGTCTCTCATGTCCACCACCCAGAGCCGCCCACCCTGGATGAACTCTGGCCCTTCGGAGAGTCGGCCTTACCACGGCATGCATGGAGGTGGTCCTGGTGGACCTGGAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGACATGGTGGACATCCCATGCAGCACAACCCAAATGGACCCCCACCGCCTTGGATGCAGCCTCCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGATCAGTACCTGGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGCCTGCATCAAGGAAAAGGTATGATGCCGCCGCCACCTATGGGCATGATGCCGCCGCCGCCGCCGCCTCCCAGTGGGCAGCCCCCACCTCCTCCCTCTGGCCCTCTTCCTCCATGGCAGCAGCAACAGCAGCAGCCTCCACCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGTACCCCCTTGCCATGGCAGCAAAATACGACGACTACCACCACGAGCGCTGGCACAGGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAGCCCCTCAGATGCAAGGCAACCCCACTATGGTGCCCCTGCCCCCCGGGGTCCAGCCGCCTCTGCCGCCCGGGGCCCCTCCCCCTCCGCCGCCTCCGCCTCCTGGTTCCGCCGGCATGATGTATGCCCCGCCCCCTCCTCCTCCGCCTCCCATGGACCCTTCTAACTTTGTCACCATGATGGGCATGGGGGTGGCGGGCATGCCGCCCTTCGGGATGCCTCCAGCTCCCCCACCGCCTCCACCACAGAACTAG

Related Sequences

XP_004852519.1 Protein

Sf1 PREDICTED: splicing factor 1 isoform X1 [Heterocephalus glaber]

Length: 639 aa      View alignments
>XP_004852519.1
MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN